RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 ABCA10Q8WWZ4 1543 aa27.94■■■□□ 2.06
CLN5-216ENST00000636780 RRBP1Q9P2E9 1410 aaKnown RBP27.92■■■□□ 2.06
CLN5-216ENST00000636780 PHLDB1Q86UU1 1377 aa27.9■■■□□ 2.06
CLN5-216ENST00000636780 MIER1Q8N108 512 aa27.89■■■□□ 2.05
CLN5-216ENST00000636780 TIAM1Q13009 1591 aa27.82■■■□□ 2.04
CLN5-216ENST00000636780 ARID3CA6NKF2 412 aa27.82■■■□□ 2.04
CLN5-216ENST00000636780 LRRC9Q6ZRR7 1453 aa27.81■■■□□ 2.04
CLN5-216ENST00000636780 PCF11O94913 1555 aaKnown RBP27.8■■■□□ 2.04
CLN5-216ENST00000636780 LAMC3Q9Y6N6 1575 aa27.79■■■□□ 2.04
CLN5-216ENST00000636780 PDS5BQ9NTI5 1447 aa27.78■■■□□ 2.04
CLN5-216ENST00000636780 ACIN1Q9UKV3 1341 aaKnown RBP27.78■■■□□ 2.04
CLN5-216ENST00000636780 RAB3GAP2Q9H2M9 1393 aa27.76■■■□□ 2.04
CLN5-216ENST00000636780 GAPVD1Q14C86 1478 aa27.75■■■□□ 2.03
CLN5-216ENST00000636780 KIF21AQ7Z4S6 1674 aa27.75■■■□□ 2.03
CLN5-216ENST00000636780 FHAD1B1AJZ9 1412 aa27.71■■■□□ 2.03
CLN5-216ENST00000636780 AQRO60306 1485 aaKnown RBP eCLIP27.71■■■□□ 2.03
CLN5-216ENST00000636780 SIN3AQ96ST3 1273 aa27.7■■■□□ 2.02
CLN5-216ENST00000636780 GTF3C3Q9Y5Q9 886 aa27.61■■■□□ 2.01
CLN5-216ENST00000636780 CUL7Q14999 1698 aa27.58■■■□□ 2.01
CLN5-216ENST00000636780 WDR97A6NE52 1622 aa27.58■■■□□ 2.01
CLN5-216ENST00000636780 CASKIN1Q8WXD9 1431 aa27.57■■■□□ 2
CLN5-216ENST00000636780 ABCA5Q8WWZ7 1642 aa27.57■■■□□ 2
CLN5-216ENST00000636780 SETD5Q9C0A6 1442 aa27.55■■■□□ 2
CLN5-216ENST00000636780 MTUS2Q5JR59 1369 aa27.54■■■□□ 2
CLN5-216ENST00000636780 MAP3K1Q13233 1512 aa27.54■■■□□ 2
CLN5-216ENST00000636780 CLSPNQ9HAW4 1339 aa27.53■■■□□ 2
CLN5-216ENST00000636780 CTTNBP2Q8WZ74 1663 aa27.53■■■□□ 2
CLN5-216ENST00000636780 CENPBP07199 599 aaPredicted RBP27.53■■■□□ 2
CLN5-216ENST00000636780 HIRIP3Q9BW71 556 aaPredicted RBP27.51■■□□□ 1.99
CLN5-216ENST00000636780 FYCO1Q9BQS8 1478 aa27.51■■□□□ 1.99
CLN5-216ENST00000636780 ZNF608Q9ULD9 1512 aaPredicted RBP27.49■■□□□ 1.99
CLN5-216ENST00000636780 SNAPC4Q5SXM2 1469 aa27.49■■□□□ 1.99
CLN5-216ENST00000636780 TARBP1Q13395 1621 aaKnown RBP27.48■■□□□ 1.99
CLN5-216ENST00000636780 MAPKBP1O60336 1514 aa27.48■■□□□ 1.99
CLN5-216ENST00000636780 FMN1Q68DA7 1419 aa27.48■■□□□ 1.99
CLN5-216ENST00000636780 EFCAB5A4FU69 1503 aa27.47■■□□□ 1.99
CLN5-216ENST00000636780 CFAP43Q8NDM7 1665 aa27.47■■□□□ 1.99
CLN5-216ENST00000636780 CHIC2Q9UKJ5 165 aa27.45■■□□□ 1.99
CLN5-216ENST00000636780 PELP1Q8IZL8 1130 aaKnown RBP27.44■■□□□ 1.98
CLN5-216ENST00000636780 PTPRKQ15262 1439 aa27.42■■□□□ 1.98
CLN5-216ENST00000636780 FBLN2P98095 1184 aa27.39■■□□□ 1.97
CLN5-216ENST00000636780 LRRIQ1Q96JM4 1722 aa27.38■■□□□ 1.97
CLN5-216ENST00000636780 FGD6Q6ZV73 1430 aa27.38■■□□□ 1.97
CLN5-216ENST00000636780 RRP7BPQ9NSQ0 103 aa27.36■■□□□ 1.97
CLN5-216ENST00000636780 MRC2Q9UBG0 1479 aa27.35■■□□□ 1.97
CLN5-216ENST00000636780 SAMD9Q5K651 1589 aa27.34■■□□□ 1.97
CLN5-216ENST00000636780 GRIN2BQ13224 1484 aa27.32■■□□□ 1.96
CLN5-216ENST00000636780 NCOA2Q15596 1464 aa27.32■■□□□ 1.96
CLN5-216ENST00000636780 MAGI3Q5TCQ9 1506 aa27.31■■□□□ 1.96
CLN5-216ENST00000636780 KCNH8Q96L42 1107 aa27.31■■□□□ 1.96
CLN5-216ENST00000636780 PBRM1Q86U86 1689 aa27.26■■□□□ 1.95
CLN5-216ENST00000636780 CDK13Q14004 1512 aaKnown RBP27.26■■□□□ 1.95
CLN5-216ENST00000636780 DDX10Q13206 875 aaKnown RBP27.23■■□□□ 1.95
CLN5-216ENST00000636780 ERCC6Q03468 1493 aa27.21■■□□□ 1.95
CLN5-216ENST00000636780 MYOM3Q5VTT5 1437 aa27.2■■□□□ 1.95
CLN5-216ENST00000636780 ADAMTS12P58397 1594 aa27.19■■□□□ 1.94
CLN5-216ENST00000636780 IQGAP2Q13576 1575 aa27.18■■□□□ 1.94
CLN5-216ENST00000636780 ZNF644Q9H582 1327 aaPredicted RBP27.17■■□□□ 1.94
CLN5-216ENST00000636780 FOXD1Q16676 465 aa27.16■■□□□ 1.94
CLN5-216ENST00000636780 CHMP7Q8WUX9 453 aaPredicted RBP27.16■■□□□ 1.94
CLN5-216ENST00000636780 TRIM52Q96A61 297 aa27.15■■□□□ 1.94
CLN5-216ENST00000636780 CCDC18Q5T9S5 1454 aa27.15■■□□□ 1.94
CLN5-216ENST00000636780 EPRSP07814 1512 aaKnown RBP27.13■■□□□ 1.93
CLN5-216ENST00000636780 PPP1R15AO75807 674 aaPredicted RBP27.12■■□□□ 1.93
CLN5-216ENST00000636780 NAIPQ13075 1403 aa27.11■■□□□ 1.93
CLN5-216ENST00000636780 IFT140Q96RY7 1462 aa27.11■■□□□ 1.93
CLN5-216ENST00000636780 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.09■■□□□ 1.93
CLN5-216ENST00000636780 THOC2Q8NI27 1593 aaKnown RBP27.07■■□□□ 1.92
CLN5-216ENST00000636780 HFM1A2PYH4 1435 aa27.06■■□□□ 1.92
CLN5-216ENST00000636780 SUPT6HQ7KZ85 1726 aaKnown RBP27.06■■□□□ 1.92
CLN5-216ENST00000636780 UGGT2Q9NYU1 1516 aa27.05■■□□□ 1.92
CLN5-216ENST00000636780 WDR62O43379 1518 aa27.05■■□□□ 1.92
CLN5-216ENST00000636780 EHBP1L1Q8N3D4 1523 aa27.05■■□□□ 1.92
CLN5-216ENST00000636780 PTPN23Q9H3S7 1636 aa27.04■■□□□ 1.92
CLN5-216ENST00000636780 DISP1Q96F81 1524 aa27.03■■□□□ 1.92
CLN5-216ENST00000636780 TONSLQ96HA7 1378 aa27.02■■□□□ 1.92
CLN5-216ENST00000636780 EIF4G3O43432 1585 aaKnown RBP27.01■■□□□ 1.91
CLN5-216ENST00000636780 ZNF777Q9ULD5 760 aaPredicted RBP27.01■■□□□ 1.91
CLN5-216ENST00000636780 GRIN2AQ12879 1464 aa26.99■■□□□ 1.91
CLN5-216ENST00000636780 KDM6BO15054 1643 aa26.98■■□□□ 1.91
CLN5-216ENST00000636780 UACAQ9BZF9 1416 aa26.97■■□□□ 1.91
CLN5-216ENST00000636780 HECW1Q76N89 1606 aa26.97■■□□□ 1.91
CLN5-216ENST00000636780 KIAA0586Q9BVV6 1533 aa26.97■■□□□ 1.91
CLN5-216ENST00000636780 ARHGEF11O15085 1522 aa26.95■■□□□ 1.9
CLN5-216ENST00000636780 PLB1Q6P1J6 1458 aa26.94■■□□□ 1.9
CLN5-216ENST00000636780 PRG4Q92954 1404 aaPredicted RBP26.94■■□□□ 1.9
CLN5-216ENST00000636780 JPH4Q96JJ6 628 aa26.93■■□□□ 1.9
CLN5-216ENST00000636780 NUP153P49790 1475 aaKnown RBP26.93■■□□□ 1.9
CLN5-216ENST00000636780 KIAA0556O60303 1618 aa26.89■■□□□ 1.9
CLN5-216ENST00000636780 MPHOSPH9Q99550 1183 aa26.89■■□□□ 1.89
CLN5-216ENST00000636780 DENND4BO75064 1496 aaPredicted RBP26.87■■□□□ 1.89
CLN5-216ENST00000636780 CEP170Q5SW79 1584 aa26.85■■□□□ 1.89
CLN5-216ENST00000636780 TIMELESSQ9UNS1 1208 aa26.83■■□□□ 1.89
CLN5-216ENST00000636780 CFDP1Q9UEE9 299 aaPredicted RBP26.82■■□□□ 1.88
CLN5-216ENST00000636780 TCOF1Q13428 1488 aaKnown RBP26.81■■□□□ 1.88
CLN5-216ENST00000636780 CDK11AQ9UQ88 783 aaPredicted RBP26.79■■□□□ 1.88
CLN5-216ENST00000636780 L3MBTL2Q969R5 705 aa26.78■■□□□ 1.88
CLN5-216ENST00000636780 ABCC5O15440 1437 aa26.77■■□□□ 1.88
CLN5-216ENST00000636780 SYNJ2O15056 1496 aa26.77■■□□□ 1.88
CLN5-216ENST00000636780 DAPK1P53355 1430 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms