RNA–Protein interactions for RNA: ENST00000636705.1

CLN5-214, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,408 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-214ENST00000636705 WDR62O43379 1518 aa6.96□□□□□ -1.3
CLN5-214ENST00000636705 VSIG10Q8N0Z9 540 aa6.95□□□□□ -1.3
CLN5-214ENST00000636705 CEP164Q9UPV0 1460 aa6.95□□□□□ -1.3
CLN5-214ENST00000636705 FBLN2P98095 1184 aa6.93□□□□□ -1.3
CLN5-214ENST00000636705 GTF3C3Q9Y5Q9 886 aa6.92□□□□□ -1.3
CLN5-214ENST00000636705 FANCD2Q9BXW9 1451 aa6.91□□□□□ -1.3
CLN5-214ENST00000636705 MROH2BQ7Z745 1585 aa6.9□□□□□ -1.3
CLN5-214ENST00000636705 HOMEZQ8IX15 550 aa6.89□□□□□ -1.31
CLN5-214ENST00000636705 KIF21AQ7Z4S6 1674 aa6.89□□□□□ -1.31
CLN5-214ENST00000636705 CFTRP13569 1480 aa6.89□□□□□ -1.31
CLN5-214ENST00000636705 MKRN4PQ13434 485 aaPredicted RBP6.86□□□□□ -1.31
CLN5-214ENST00000636705 ABCC8Q09428 1581 aa6.86□□□□□ -1.31
CLN5-214ENST00000636705 IFT140Q96RY7 1462 aa6.85□□□□□ -1.31
CLN5-214ENST00000636705 CYB5RLQ6IPT4 315 aa6.81□□□□□ -1.32
CLN5-214ENST00000636705 RSF1Q96T23 1441 aaPredicted RBP6.8□□□□□ -1.32
CLN5-214ENST00000636705 URB2Q14146 1524 aaKnown RBP6.79□□□□□ -1.32
CLN5-214ENST00000636705 TMEM132AQ24JP5 1023 aa6.79□□□□□ -1.32
CLN5-214ENST00000636705 ARHGEF11O15085 1522 aa6.79□□□□□ -1.32
CLN5-214ENST00000636705 TOP2AP11388 1531 aaKnown RBP6.78□□□□□ -1.32
CLN5-214ENST00000636705 RIMBP3CA6NJZ7 1639 aa6.77□□□□□ -1.33
CLN5-214ENST00000636705 RIMBP3BA6NNM3 1639 aa6.77□□□□□ -1.33
CLN5-214ENST00000636705 RIMBP3Q9UFD9 1639 aa6.77□□□□□ -1.33
CLN5-214ENST00000636705 SPDYE2BA6NHP3 402 aa6.77□□□□□ -1.33
CLN5-214ENST00000636705 SPDYE6P0CI01 402 aa6.77□□□□□ -1.33
CLN5-214ENST00000636705 SPDYE2Q495Y8 402 aa6.77□□□□□ -1.33
CLN5-214ENST00000636705 RBM42Q9BTD8 480 aaKnown RBP6.77□□□□□ -1.33
CLN5-214ENST00000636705 WIZO95785 1651 aa6.76□□□□□ -1.33
CLN5-214ENST00000636705 SPDYE4A6NLX3 237 aa6.75□□□□□ -1.33
CLN5-214ENST00000636705 PODXL2Q9NZ53 605 aa6.75□□□□□ -1.33
CLN5-214ENST00000636705 TOPBP1Q92547 1522 aa6.73□□□□□ -1.33
CLN5-214ENST00000636705 CHMP7Q8WUX9 453 aaPredicted RBP6.73□□□□□ -1.33
CLN5-214ENST00000636705 PKD2Q13563 968 aa6.71□□□□□ -1.33
CLN5-214ENST00000636705 ZNF608Q9ULD9 1512 aaPredicted RBP6.71□□□□□ -1.33
CLN5-214ENST00000636705 ZNF692Q9BU19 519 aaPredicted RBP6.71□□□□□ -1.34
CLN5-214ENST00000636705 WDR97A6NE52 1622 aa6.71□□□□□ -1.34
CLN5-214ENST00000636705 DNMBPQ6XZF7 1577 aa6.7□□□□□ -1.34
CLN5-214ENST00000636705 C14orf37Q86TY3 774 aa6.7□□□□□ -1.34
CLN5-214ENST00000636705 SSUH2Q9Y2M2 353 aa6.7□□□□□ -1.34
CLN5-214ENST00000636705 RANGAP1P46060 587 aaPredicted RBP6.7□□□□□ -1.34
CLN5-214ENST00000636705 PAXIP1Q6ZW49 1069 aaPredicted RBP6.7□□□□□ -1.34
CLN5-214ENST00000636705 CCDC88BA6NC98 1476 aa6.69□□□□□ -1.34
CLN5-214ENST00000636705 ARAP1Q96P48 1450 aa6.69□□□□□ -1.34
CLN5-214ENST00000636705 SOGA1O94964 1423 aa6.68□□□□□ -1.34
CLN5-214ENST00000636705 NPM1P06748 294 aaKnown RBP eCLIP6.68□□□□□ -1.34
CLN5-214ENST00000636705 CFAP44Q96MT7 982 aa6.68□□□□□ -1.34
CLN5-214ENST00000636705 ERICH6Q7L0X2 663 aa6.68□□□□□ -1.34
CLN5-214ENST00000636705 PROM2Q8N271 834 aa6.68□□□□□ -1.34
CLN5-214ENST00000636705 AKT1S1Q96B36 256 aa6.68□□□□□ -1.34
CLN5-214ENST00000636705 AQRO60306 1485 aaKnown RBP eCLIP6.68□□□□□ -1.34
CLN5-214ENST00000636705 KLHL34Q8N239 644 aa6.67□□□□□ -1.34
CLN5-214ENST00000636705 TSHZ2Q9NRE2 1034 aa6.67□□□□□ -1.34
CLN5-214ENST00000636705 MAGI1Q96QZ7 1491 aaPredicted RBP6.67□□□□□ -1.34
CLN5-214ENST00000636705 SYNJ1O43426 1573 aa6.67□□□□□ -1.34
CLN5-214ENST00000636705 EIF4G3O43432 1585 aaKnown RBP6.67□□□□□ -1.34
CLN5-214ENST00000636705 PRDM2Q13029 1718 aa6.66□□□□□ -1.34
CLN5-214ENST00000636705 GRIN2BQ13224 1484 aa6.65□□□□□ -1.34
CLN5-214ENST00000636705 POLA1P09884 1462 aaPredicted RBP6.64□□□□□ -1.35
CLN5-214ENST00000636705 IFNLR1Q8IU57 520 aaPredicted RBP6.64□□□□□ -1.35
CLN5-214ENST00000636705 SYNJ2O15056 1496 aa6.64□□□□□ -1.35
CLN5-214ENST00000636705 TDRD9Q8NDG6 1382 aaKnown RBP6.64□□□□□ -1.35
CLN5-214ENST00000636705 TARBP1Q13395 1621 aaKnown RBP6.63□□□□□ -1.35
CLN5-214ENST00000636705 SUPT5HO00267 1087 aaKnown RBP6.62□□□□□ -1.35
CLN5-214ENST00000636705 BBXQ8WY36 941 aaPredicted RBP6.62□□□□□ -1.35
CLN5-214ENST00000636705 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.62□□□□□ -1.35
CLN5-214ENST00000636705 SNAPC4Q5SXM2 1469 aa6.61□□□□□ -1.35
CLN5-214ENST00000636705 ILDR1Q86SU0 546 aaPredicted RBP6.61□□□□□ -1.35
CLN5-214ENST00000636705 GAPVD1Q14C86 1478 aa6.6□□□□□ -1.35
CLN5-214ENST00000636705 CLASP1Q7Z460 1538 aa6.6□□□□□ -1.35
CLN5-214ENST00000636705 NBR1Q14596 966 aa6.59□□□□□ -1.35
CLN5-214ENST00000636705 VASPP50552 380 aaPredicted RBP6.59□□□□□ -1.35
CLN5-214ENST00000636705 CHD1O14646 1710 aa6.59□□□□□ -1.35
CLN5-214ENST00000636705 RAD54L2Q9Y4B4 1467 aa6.59□□□□□ -1.36
CLN5-214ENST00000636705 STAG3Q9UJ98 1225 aa6.58□□□□□ -1.36
CLN5-214ENST00000636705 FBXO3Q9UK99 471 aa6.58□□□□□ -1.36
CLN5-214ENST00000636705 FGD5Q6ZNL6 1462 aa6.58□□□□□ -1.36
CLN5-214ENST00000636705 REM2Q8IYK8 340 aaPredicted RBP6.57□□□□□ -1.36
CLN5-214ENST00000636705 SPDYE1Q8NFV5 336 aaPredicted RBP6.56□□□□□ -1.36
CLN5-214ENST00000636705 TRIM26Q12899 539 aaPredicted RBP6.56□□□□□ -1.36
CLN5-214ENST00000636705 UBTFP17480 764 aaKnown RBP6.55□□□□□ -1.36
CLN5-214ENST00000636705 ABCA10Q8WWZ4 1543 aa6.54□□□□□ -1.36
CLN5-214ENST00000636705 WRNQ14191 1432 aaPredicted RBP eCLIP6.54□□□□□ -1.36
CLN5-214ENST00000636705 NPM2Q86SE8 214 aaKnown RBP6.54□□□□□ -1.36
CLN5-214ENST00000636705 FHAD1B1AJZ9 1412 aa6.53□□□□□ -1.36
CLN5-214ENST00000636705 GRIN2AQ12879 1464 aa6.52□□□□□ -1.37
CLN5-214ENST00000636705 NUP160Q12769 1436 aa6.52□□□□□ -1.37
CLN5-214ENST00000636705 SPRYD3Q8NCJ5 442 aa6.51□□□□□ -1.37
CLN5-214ENST00000636705 FAM69CQ0P6D2 419 aa6.51□□□□□ -1.37
CLN5-214ENST00000636705 POTEHQ6S545 545 aa6.51□□□□□ -1.37
CLN5-214ENST00000636705 JPH4Q96JJ6 628 aa6.51□□□□□ -1.37
CLN5-214ENST00000636705 CUX1P39880 1505 aa6.5□□□□□ -1.37
CLN5-214ENST00000636705 HRCP23327 699 aa6.5□□□□□ -1.37
CLN5-214ENST00000636705 SOCS7O14512 581 aa6.49□□□□□ -1.37
CLN5-214ENST00000636705 PITPNM1O00562 1244 aa6.48□□□□□ -1.37
CLN5-214ENST00000636705 ABCC10Q5T3U5 1492 aa6.48□□□□□ -1.37
CLN5-214ENST00000636705 ERICH3Q5RHP9 1530 aa6.48□□□□□ -1.37
CLN5-214ENST00000636705 PRG4Q92954 1404 aaPredicted RBP6.47□□□□□ -1.37
CLN5-214ENST00000636705 CEP170Q5SW79 1584 aa6.47□□□□□ -1.37
CLN5-214ENST00000636705 CLEC11AQ9Y240 323 aa6.46□□□□□ -1.38
CLN5-214ENST00000636705 ABCA5Q8WWZ7 1642 aa6.46□□□□□ -1.38
CLN5-214ENST00000636705 RGL2O15211 777 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms