RNA–Protein interactions for RNA: ENST00000636640.1

SYNGAP1-216, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 118 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-216ENST00000636640 TRHP20396 242 aaPredicted RBP2.93□□□□□ -1.94
SYNGAP1-216ENST00000636640 CHMP7Q8WUX9 453 aaPredicted RBP2.93□□□□□ -1.94
SYNGAP1-216ENST00000636640 FHAD1B1AJZ9 1412 aa2.92□□□□□ -1.94
SYNGAP1-216ENST00000636640 DIP2BQ9P265 1576 aa2.91□□□□□ -1.94
SYNGAP1-216ENST00000636640 ZCCHC11Q5TAX3 1644 aaKnown RBP2.9□□□□□ -1.94
SYNGAP1-216ENST00000636640 ABCC2Q92887 1545 aa2.9□□□□□ -1.95
SYNGAP1-216ENST00000636640 PRG4Q92954 1404 aaPredicted RBP2.9□□□□□ -1.95
SYNGAP1-216ENST00000636640 LRRIQ1Q96JM4 1722 aa2.9□□□□□ -1.95
SYNGAP1-216ENST00000636640 IGF1RP08069 1367 aa2.89□□□□□ -1.95
SYNGAP1-216ENST00000636640 IQGAP2Q13576 1575 aa2.89□□□□□ -1.95
SYNGAP1-216ENST00000636640 MAP3K4Q9Y6R4 1608 aa2.89□□□□□ -1.95
SYNGAP1-216ENST00000636640 JPH4Q96JJ6 628 aa2.88□□□□□ -1.95
SYNGAP1-216ENST00000636640 KDM6BO15054 1643 aa2.88□□□□□ -1.95
SYNGAP1-216ENST00000636640 TTBK1Q5TCY1 1321 aaPredicted RBP2.88□□□□□ -1.95
SYNGAP1-216ENST00000636640 MAPKBP1O60336 1514 aa2.88□□□□□ -1.95
SYNGAP1-216ENST00000636640 DISP1Q96F81 1524 aa2.88□□□□□ -1.95
SYNGAP1-216ENST00000636640 SIGLEC1Q9BZZ2 1709 aa2.88□□□□□ -1.95
SYNGAP1-216ENST00000636640 KIAA0556O60303 1618 aa2.87□□□□□ -1.95
SYNGAP1-216ENST00000636640 KIAA0586Q9BVV6 1533 aa2.87□□□□□ -1.95
SYNGAP1-216ENST00000636640 KIF21BO75037 1637 aa2.86□□□□□ -1.95
SYNGAP1-216ENST00000636640 KIF27Q86VH2 1401 aa2.86□□□□□ -1.95
SYNGAP1-216ENST00000636640 ABCC10Q5T3U5 1492 aa2.86□□□□□ -1.95
SYNGAP1-216ENST00000636640 COL17A1Q9UMD9 1497 aaPredicted RBP2.86□□□□□ -1.95
SYNGAP1-216ENST00000636640 CARMIL1Q5VZK9 1371 aa2.86□□□□□ -1.95
SYNGAP1-216ENST00000636640 CFAP43Q8NDM7 1665 aa2.85□□□□□ -1.95
SYNGAP1-216ENST00000636640 UGGT2Q9NYU1 1516 aa2.85□□□□□ -1.95
SYNGAP1-216ENST00000636640 ABCA8O94911 1581 aa2.85□□□□□ -1.95
SYNGAP1-216ENST00000636640 GLI2P10070 1586 aa2.85□□□□□ -1.95
SYNGAP1-216ENST00000636640 RAPGEF2Q9Y4G8 1499 aa2.84□□□□□ -1.95
SYNGAP1-216ENST00000636640 SAMD9Q5K651 1589 aa2.84□□□□□ -1.95
SYNGAP1-216ENST00000636640 FAM69CQ0P6D2 419 aa2.84□□□□□ -1.95
SYNGAP1-216ENST00000636640 PTPRGP23470 1445 aa2.84□□□□□ -1.96
SYNGAP1-216ENST00000636640 ASXL2Q76L83 1435 aa2.84□□□□□ -1.96
SYNGAP1-216ENST00000636640 PLB1Q6P1J6 1458 aa2.84□□□□□ -1.96
SYNGAP1-216ENST00000636640 KDM5BQ9UGL1 1544 aa2.83□□□□□ -1.96
SYNGAP1-216ENST00000636640 RAPGEF6Q8TEU7 1601 aa2.83□□□□□ -1.96
SYNGAP1-216ENST00000636640 RICTORQ6R327 1708 aa2.83□□□□□ -1.96
SYNGAP1-216ENST00000636640 KDM4FA0A1W2PPD8 638 aa2.83□□□□□ -1.96
SYNGAP1-216ENST00000636640 TNIKQ9UKE5 1360 aa2.83□□□□□ -1.96
SYNGAP1-216ENST00000636640 UHRF1BP1LA0JNW5 1464 aa2.83□□□□□ -1.96
SYNGAP1-216ENST00000636640 EPRSP07814 1512 aaKnown RBP2.83□□□□□ -1.96
SYNGAP1-216ENST00000636640 FRMPD1Q5SYB0 1578 aa2.83□□□□□ -1.96
SYNGAP1-216ENST00000636640 CDC42BPBQ9Y5S2 1711 aa2.82□□□□□ -1.96
SYNGAP1-216ENST00000636640 AEBP2Q6ZN18 517 aaPredicted RBP2.82□□□□□ -1.96
SYNGAP1-216ENST00000636640 P3H3Q8IVL6 736 aa2.82□□□□□ -1.96
SYNGAP1-216ENST00000636640 UACAQ9BZF9 1416 aa2.82□□□□□ -1.96
SYNGAP1-216ENST00000636640 PRXQ9BXM0 1461 aa2.82□□□□□ -1.96
SYNGAP1-216ENST00000636640 ABCA9Q8IUA7 1624 aa2.82□□□□□ -1.96
SYNGAP1-216ENST00000636640 RIMS1Q86UR5 1692 aaKnown RBP2.82□□□□□ -1.96
SYNGAP1-216ENST00000636640 ARID3CA6NKF2 412 aa2.81□□□□□ -1.96
SYNGAP1-216ENST00000636640 CARMIL2Q6F5E8 1435 aa2.81□□□□□ -1.96
SYNGAP1-216ENST00000636640 ADGRL1O94910 1474 aa2.81□□□□□ -1.96
SYNGAP1-216ENST00000636640 TTC37Q6PGP7 1564 aa2.81□□□□□ -1.96
SYNGAP1-216ENST00000636640 HECW2Q9P2P5 1572 aa2.81□□□□□ -1.96
SYNGAP1-216ENST00000636640 ADAMTSL3P82987 1691 aa2.81□□□□□ -1.96
SYNGAP1-216ENST00000636640 BCORL1Q5H9F3 1711 aa2.81□□□□□ -1.96
SYNGAP1-216ENST00000636640 CDC42BPAQ5VT25 1732 aa2.81□□□□□ -1.96
SYNGAP1-216ENST00000636640 MYO5CQ9NQX4 1742 aa2.81□□□□□ -1.96
SYNGAP1-216ENST00000636640 CFAP65Q6ZU64 1925 aaKnown RBP2.81□□□□□ -1.96
SYNGAP1-216ENST00000636640 FER1L4A9Z1Z3 1794 aa2.8□□□□□ -1.96
SYNGAP1-216ENST00000636640 KIF14Q15058 1648 aa2.8□□□□□ -1.96
SYNGAP1-216ENST00000636640 MADDQ8WXG6 1647 aa2.8□□□□□ -1.96
SYNGAP1-216ENST00000636640 ATP10BO94823 1461 aa2.8□□□□□ -1.96
SYNGAP1-216ENST00000636640 WDR7Q9Y4E6 1490 aa2.8□□□□□ -1.96
SYNGAP1-216ENST00000636640 NPM1P06748 294 aaKnown RBP eCLIP2.8□□□□□ -1.96
SYNGAP1-216ENST00000636640 EHMT2Q96KQ7 1210 aa2.8□□□□□ -1.96
SYNGAP1-216ENST00000636640 CDK13Q14004 1512 aaKnown RBP2.79□□□□□ -1.96
SYNGAP1-216ENST00000636640 RANGAP1P46060 587 aaPredicted RBP2.79□□□□□ -1.96
SYNGAP1-216ENST00000636640 FAM9AQ8IZU1 332 aaPredicted RBP2.79□□□□□ -1.96
SYNGAP1-216ENST00000636640 KCNH8Q96L42 1107 aa2.79□□□□□ -1.96
SYNGAP1-216ENST00000636640 SUPT6HQ7KZ85 1726 aaKnown RBP2.79□□□□□ -1.96
SYNGAP1-216ENST00000636640 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.78□□□□□ -1.96
SYNGAP1-216ENST00000636640 NUP153P49790 1475 aaKnown RBP2.78□□□□□ -1.96
SYNGAP1-216ENST00000636640 FHOD3Q2V2M9 1422 aa2.78□□□□□ -1.96
SYNGAP1-216ENST00000636640 STRCQ7RTU9 1775 aa2.78□□□□□ -1.96
SYNGAP1-216ENST00000636640 ITSN2Q9NZM3 1697 aa2.78□□□□□ -1.96
SYNGAP1-216ENST00000636640 MAGI3Q5TCQ9 1506 aa2.78□□□□□ -1.97
SYNGAP1-216ENST00000636640 GOLGA3Q08378 1498 aa2.77□□□□□ -1.97
SYNGAP1-216ENST00000636640 CD109Q6YHK3 1445 aa2.77□□□□□ -1.97
SYNGAP1-216ENST00000636640 C3P01024 1663 aa2.77□□□□□ -1.97
SYNGAP1-216ENST00000636640 CSRNP3Q8WYN3 585 aa2.77□□□□□ -1.97
SYNGAP1-216ENST00000636640 HECW1Q76N89 1606 aa2.77□□□□□ -1.97
SYNGAP1-216ENST00000636640 PCF11O94913 1555 aaKnown RBP2.77□□□□□ -1.97
SYNGAP1-216ENST00000636640 ARAP3Q8WWN8 1544 aa2.77□□□□□ -1.97
SYNGAP1-216ENST00000636640 TEX14Q8IWB6 1497 aa2.77□□□□□ -1.97
SYNGAP1-216ENST00000636640 KIDINS220Q9ULH0 1771 aa2.77□□□□□ -1.97
SYNGAP1-216ENST00000636640 SETD1BQ9UPS6 1966 aaKnown RBP2.76□□□□□ -1.97
SYNGAP1-216ENST00000636640 PREX2Q70Z35 1606 aa2.76□□□□□ -1.97
SYNGAP1-216ENST00000636640 ABCA6Q8N139 1617 aa2.76□□□□□ -1.97
SYNGAP1-216ENST00000636640 ARHGEF40Q8TER5 1519 aa2.76□□□□□ -1.97
SYNGAP1-216ENST00000636640 ARHGAP35Q9NRY4 1499 aa2.76□□□□□ -1.97
SYNGAP1-216ENST00000636640 ADGBQ8N7X0 1667 aa2.76□□□□□ -1.97
SYNGAP1-216ENST00000636640 PREX1Q8TCU6 1659 aa2.76□□□□□ -1.97
SYNGAP1-216ENST00000636640 CFAP74Q9C0B2 1584 aa2.75□□□□□ -1.97
SYNGAP1-216ENST00000636640 RAPGEF3O95398 923 aa2.75□□□□□ -1.97
SYNGAP1-216ENST00000636640 CHIC1Q5VXU3 224 aa2.75□□□□□ -1.97
SYNGAP1-216ENST00000636640 ILDR1Q86SU0 546 aaPredicted RBP2.75□□□□□ -1.97
SYNGAP1-216ENST00000636640 CLTCQ00610 1675 aaKnown RBP2.75□□□□□ -1.97
SYNGAP1-216ENST00000636640 YEATS2Q9ULM3 1422 aa2.75□□□□□ -1.97
SYNGAP1-216ENST00000636640 DIP2CQ9Y2E4 1556 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms