RNA–Protein interactions for RNA: ENST00000636633.1

CACNA1D-216, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 5

Gene CACNA1D, Length 4,394 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-216ENST00000636633 VPS8Q8N3P4 1428 aa12.52□□□□□ -0.4
CACNA1D-216ENST00000636633 HIRIP3Q9BW71 556 aaPredicted RBP12.52□□□□□ -0.4
CACNA1D-216ENST00000636633 FHAD1B1AJZ9 1412 aa12.52□□□□□ -0.41
CACNA1D-216ENST00000636633 BICRAQ9NZM4 1560 aa12.51□□□□□ -0.41
CACNA1D-216ENST00000636633 BCANQ96GW7 911 aa12.51□□□□□ -0.41
CACNA1D-216ENST00000636633 KDM2AQ9Y2K7 1162 aa12.5□□□□□ -0.41
CACNA1D-216ENST00000636633 RAPGEF2Q9Y4G8 1499 aa12.49□□□□□ -0.41
CACNA1D-216ENST00000636633 ESF1Q9H501 851 aaKnown RBP12.48□□□□□ -0.41
CACNA1D-216ENST00000636633 FANCD2Q9BXW9 1451 aa12.47□□□□□ -0.41
CACNA1D-216ENST00000636633 NCAPD3P42695 1498 aa12.47□□□□□ -0.41
CACNA1D-216ENST00000636633 CCNB3Q8WWL7 1395 aa12.47□□□□□ -0.41
CACNA1D-216ENST00000636633 PLPPR3Q6T4P5 718 aa12.46□□□□□ -0.42
CACNA1D-216ENST00000636633 STAG3Q9UJ98 1225 aa12.44□□□□□ -0.42
CACNA1D-216ENST00000636633 SIN3AQ96ST3 1273 aa12.43□□□□□ -0.42
CACNA1D-216ENST00000636633 ACIN1Q9UKV3 1341 aaKnown RBP12.41□□□□□ -0.42
CACNA1D-216ENST00000636633 RGL3Q3MIN7 710 aa12.4□□□□□ -0.42
CACNA1D-216ENST00000636633 MIER1Q8N108 512 aa12.39□□□□□ -0.43
CACNA1D-216ENST00000636633 FHOD3Q2V2M9 1422 aa12.38□□□□□ -0.43
CACNA1D-216ENST00000636633 EIF4G2P78344 907 aaKnown RBP eCLIP12.36□□□□□ -0.43
CACNA1D-216ENST00000636633 SENP3Q9H4L4 574 aaPredicted RBP12.36□□□□□ -0.43
CACNA1D-216ENST00000636633 FMN1Q68DA7 1419 aa12.36□□□□□ -0.43
CACNA1D-216ENST00000636633 FGD5Q6ZNL6 1462 aa12.36□□□□□ -0.43
CACNA1D-216ENST00000636633 IGF1RP08069 1367 aa12.36□□□□□ -0.43
CACNA1D-216ENST00000636633 FAM9BQ8IZU0 186 aa12.35□□□□□ -0.43
CACNA1D-216ENST00000636633 RAD54L2Q9Y4B4 1467 aa12.34□□□□□ -0.43
CACNA1D-216ENST00000636633 CARMIL2Q6F5E8 1435 aa12.34□□□□□ -0.43
CACNA1D-216ENST00000636633 HNRNPUQ00839 825 aaKnown RBP eCLIP12.34□□□□□ -0.43
CACNA1D-216ENST00000636633 JPH4Q96JJ6 628 aa12.34□□□□□ -0.43
CACNA1D-216ENST00000636633 ARHGAP35Q9NRY4 1499 aa12.32□□□□□ -0.44
CACNA1D-216ENST00000636633 CLSPNQ9HAW4 1339 aa12.3□□□□□ -0.44
CACNA1D-216ENST00000636633 SALL2Q9Y467 1007 aaPredicted RBP12.3□□□□□ -0.44
CACNA1D-216ENST00000636633 CFTRP13569 1480 aa12.29□□□□□ -0.44
CACNA1D-216ENST00000636633 NESP48681 1621 aa12.29□□□□□ -0.44
CACNA1D-216ENST00000636633 DAXXQ9UER7 740 aaPredicted RBP12.28□□□□□ -0.44
CACNA1D-216ENST00000636633 SETD5Q9C0A6 1442 aa12.28□□□□□ -0.44
CACNA1D-216ENST00000636633 TMC1Q8TDI8 760 aa12.28□□□□□ -0.44
CACNA1D-216ENST00000636633 MRS2Q9HD23 443 aa12.27□□□□□ -0.44
CACNA1D-216ENST00000636633 GAPVD1Q14C86 1478 aa12.27□□□□□ -0.45
CACNA1D-216ENST00000636633 DNAJC5BQ9UF47 199 aa12.26□□□□□ -0.45
CACNA1D-216ENST00000636633 FOXD1Q16676 465 aa12.26□□□□□ -0.45
CACNA1D-216ENST00000636633 RAB3GAP2Q9H2M9 1393 aa12.25□□□□□ -0.45
CACNA1D-216ENST00000636633 CC2D2AQ9P2K1 1620 aa12.25□□□□□ -0.45
CACNA1D-216ENST00000636633 NEFMP07197 916 aa12.24□□□□□ -0.45
CACNA1D-216ENST00000636633 SYNJ1O43426 1573 aa12.24□□□□□ -0.45
CACNA1D-216ENST00000636633 CARD11Q9BXL7 1154 aa12.23□□□□□ -0.45
CACNA1D-216ENST00000636633 AQRO60306 1485 aaKnown RBP eCLIP12.23□□□□□ -0.45
CACNA1D-216ENST00000636633 SLC24A1O60721 1099 aa12.22□□□□□ -0.45
CACNA1D-216ENST00000636633 FKBP8Q14318 412 aa12.21□□□□□ -0.45
CACNA1D-216ENST00000636633 HMGXB3Q12766 1538 aa12.21□□□□□ -0.45
CACNA1D-216ENST00000636633 CANXP27824 592 aaKnown RBP12.21□□□□□ -0.46
CACNA1D-216ENST00000636633 ARID4BQ4LE39 1312 aaPredicted RBP12.21□□□□□ -0.46
CACNA1D-216ENST00000636633 PKD2Q13563 968 aa12.2□□□□□ -0.46
CACNA1D-216ENST00000636633 SCAF1Q9H7N4 1312 aaKnown RBP12.2□□□□□ -0.46
CACNA1D-216ENST00000636633 DCAF11Q8TEB1 546 aa12.19□□□□□ -0.46
CACNA1D-216ENST00000636633 EFCAB2Q5VUJ9 269 aa12.19□□□□□ -0.46
CACNA1D-216ENST00000636633 HNRNPMP52272 730 aaKnown RBP eCLIP12.18□□□□□ -0.46
CACNA1D-216ENST00000636633 PPP1R15AO75807 674 aaPredicted RBP12.18□□□□□ -0.46
CACNA1D-216ENST00000636633 MPHOSPH9Q99550 1183 aa12.17□□□□□ -0.46
CACNA1D-216ENST00000636633 SENP3-EIF4A1A0A087X0R7 540 aa12.17□□□□□ -0.46
CACNA1D-216ENST00000636633 TIMELESSQ9UNS1 1208 aa12.17□□□□□ -0.46
CACNA1D-216ENST00000636633 BCL11AQ9H165 835 aa12.16□□□□□ -0.46
CACNA1D-216ENST00000636633 GGT6Q6P531 493 aa12.16□□□□□ -0.46
CACNA1D-216ENST00000636633 CUX1P39880 1505 aa12.15□□□□□ -0.46
CACNA1D-216ENST00000636633 PTPRGP23470 1445 aa12.14□□□□□ -0.47
CACNA1D-216ENST00000636633 NUP155O75694 1391 aa12.14□□□□□ -0.47
CACNA1D-216ENST00000636633 CCDC18Q5T9S5 1454 aa12.14□□□□□ -0.47
CACNA1D-216ENST00000636633 MLECQ14165 292 aa12.14□□□□□ -0.47
CACNA1D-216ENST00000636633 WDR43Q15061 677 aaKnown RBP eCLIP12.14□□□□□ -0.47
CACNA1D-216ENST00000636633 KIF21BO75037 1637 aa12.12□□□□□ -0.47
CACNA1D-216ENST00000636633 ANKRD30AQ9BXX3 1397 aa12.12□□□□□ -0.47
CACNA1D-216ENST00000636633 TOPBP1Q92547 1522 aa12.12□□□□□ -0.47
CACNA1D-216ENST00000636633 POLA1P09884 1462 aaPredicted RBP12.11□□□□□ -0.47
CACNA1D-216ENST00000636633 TOP2BQ02880 1626 aa12.11□□□□□ -0.47
CACNA1D-216ENST00000636633 TRHP20396 242 aaPredicted RBP12.1□□□□□ -0.47
CACNA1D-216ENST00000636633 PRXQ9BXM0 1461 aa12.1□□□□□ -0.47
CACNA1D-216ENST00000636633 ARAP1Q96P48 1450 aa12.09□□□□□ -0.47
CACNA1D-216ENST00000636633 IRX6P78412 446 aaPredicted RBP12.09□□□□□ -0.47
CACNA1D-216ENST00000636633 HSPA5P11021 654 aaKnown RBP12.08□□□□□ -0.48
CACNA1D-216ENST00000636633 MYT1Q01538 1121 aa12.08□□□□□ -0.48
CACNA1D-216ENST00000636633 KANK1Q14678 1352 aa12.08□□□□□ -0.48
CACNA1D-216ENST00000636633 KIF3BO15066 747 aa12.08□□□□□ -0.48
CACNA1D-216ENST00000636633 KNSTRNQ9Y448 316 aa12.08□□□□□ -0.48
CACNA1D-216ENST00000636633 PEG3Q9GZU2 1588 aa12.07□□□□□ -0.48
CACNA1D-216ENST00000636633 DHX57Q6P158 1386 aaKnown RBP12.07□□□□□ -0.48
CACNA1D-216ENST00000636633 CDCA8Q53HL2 280 aa12.07□□□□□ -0.48
CACNA1D-216ENST00000636633 L3MBTL2Q969R5 705 aa12.07□□□□□ -0.48
CACNA1D-216ENST00000636633 ZBTB47Q9UFB7 747 aaPredicted RBP12.07□□□□□ -0.48
CACNA1D-216ENST00000636633 GRIN2BQ13224 1484 aa12.07□□□□□ -0.48
CACNA1D-216ENST00000636633 OSCARQ8IYS5 282 aa12.06□□□□□ -0.48
CACNA1D-216ENST00000636633 SPAG9O60271 1321 aaKnown RBP12.06□□□□□ -0.48
CACNA1D-216ENST00000636633 ZNF644Q9H582 1327 aaPredicted RBP12.06□□□□□ -0.48
CACNA1D-216ENST00000636633 PHLDB1Q86UU1 1377 aa12.06□□□□□ -0.48
CACNA1D-216ENST00000636633 ERICH3Q5RHP9 1530 aa12.05□□□□□ -0.48
CACNA1D-216ENST00000636633 PLEKHG5O94827 1062 aa12.05□□□□□ -0.48
CACNA1D-216ENST00000636633 RSPH4AQ5TD94 716 aa12.05□□□□□ -0.48
CACNA1D-216ENST00000636633 CYB5RLQ6IPT4 315 aa12.05□□□□□ -0.48
CACNA1D-216ENST00000636633 MRC2Q9UBG0 1479 aa12.05□□□□□ -0.48
CACNA1D-216ENST00000636633 POGKQ9P215 609 aa12.03□□□□□ -0.48
CACNA1D-216ENST00000636633 CC2D1BQ5T0F9 858 aaKnown RBP12.02□□□□□ -0.49
CACNA1D-216ENST00000636633 LRRC9Q6ZRR7 1453 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms