RNA–Protein interactions for RNA: ENST00000636633.1

CACNA1D-216, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 5

Gene CACNA1D, Length 4,394 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-216ENST00000636633 NISCHQ9Y2I1 1504 aa16.81■□□□□ 0.28
CACNA1D-216ENST00000636633 DCAF8L2P0C7V8 631 aa16.35■□□□□ 0.21
CACNA1D-216ENST00000636633 SHROOM4Q9ULL8 1493 aa15.53■□□□□ 0.08
CACNA1D-216ENST00000636633 SUPT5HO00267 1087 aaKnown RBP15.51■□□□□ 0.07
CACNA1D-216ENST00000636633 EHMT2Q96KQ7 1210 aa14.76□□□□□ -0.05
CACNA1D-216ENST00000636633 FAM9AQ8IZU1 332 aaPredicted RBP14.55□□□□□ -0.08
CACNA1D-216ENST00000636633 ABCC9O60706 1549 aa14.37□□□□□ -0.11
CACNA1D-216ENST00000636633 TRIM41Q8WV44 630 aa14.37□□□□□ -0.11
CACNA1D-216ENST00000636633 TTBK1Q5TCY1 1321 aaPredicted RBP14.19□□□□□ -0.14
CACNA1D-216ENST00000636633 APLP2Q06481 763 aa14.18□□□□□ -0.14
CACNA1D-216ENST00000636633 RANGAP1P46060 587 aaPredicted RBP14.17□□□□□ -0.14
CACNA1D-216ENST00000636633 PCGF6Q9BYE7 350 aa14.15□□□□□ -0.14
CACNA1D-216ENST00000636633 PABPN1Q86U42 306 aaKnown RBP eCLIP14.13□□□□□ -0.15
CACNA1D-216ENST00000636633 CHIC1Q5VXU3 224 aa14.08□□□□□ -0.16
CACNA1D-216ENST00000636633 UBTFP17480 764 aaKnown RBP14.06□□□□□ -0.16
CACNA1D-216ENST00000636633 CCDC180Q9P1Z9 1646 aa14.03□□□□□ -0.16
CACNA1D-216ENST00000636633 LOC105371045A0A1W2PR82 267 aa13.96□□□□□ -0.17
CACNA1D-216ENST00000636633 ZCCHC6Q5VYS8 1495 aaKnown RBP13.96□□□□□ -0.18
CACNA1D-216ENST00000636633 ATP1B4Q9UN42 357 aaPredicted RBP13.91□□□□□ -0.18
CACNA1D-216ENST00000636633 PPARGC1BQ86YN6 1023 aaKnown RBP13.89□□□□□ -0.19
CACNA1D-216ENST00000636633 SCRIBQ14160 1630 aa13.76□□□□□ -0.21
CACNA1D-216ENST00000636633 CCER1Q8TC90 406 aaPredicted RBP13.74□□□□□ -0.21
CACNA1D-216ENST00000636633 TRIM26Q12899 539 aaPredicted RBP13.65□□□□□ -0.22
CACNA1D-216ENST00000636633 ZEB1P37275 1124 aaPredicted RBP13.61□□□□□ -0.23
CACNA1D-216ENST00000636633 ITGAEP38570 1179 aa13.53□□□□□ -0.24
CACNA1D-216ENST00000636633 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.49□□□□□ -0.25
CACNA1D-216ENST00000636633 HNRNPUL2Q1KMD3 747 aaKnown RBP13.49□□□□□ -0.25
CACNA1D-216ENST00000636633 RB1CC1Q8TDY2 1594 aa13.47□□□□□ -0.25
CACNA1D-216ENST00000636633 NACADO15069 1562 aa13.42□□□□□ -0.26
CACNA1D-216ENST00000636633 HRCP23327 699 aa13.41□□□□□ -0.26
CACNA1D-216ENST00000636633 CSRNP3Q8WYN3 585 aa13.41□□□□□ -0.26
CACNA1D-216ENST00000636633 RSF1Q96T23 1441 aaPredicted RBP13.4□□□□□ -0.26
CACNA1D-216ENST00000636633 DCAF1Q9Y4B6 1507 aa13.35□□□□□ -0.27
CACNA1D-216ENST00000636633 FBLN2P98095 1184 aa13.29□□□□□ -0.28
CACNA1D-216ENST00000636633 CECR2Q9BXF3 1484 aa13.27□□□□□ -0.29
CACNA1D-216ENST00000636633 P3H3Q8IVL6 736 aa13.26□□□□□ -0.29
CACNA1D-216ENST00000636633 FAM50AQ14320 339 aaKnown RBP13.24□□□□□ -0.29
CACNA1D-216ENST00000636633 MYT1LQ9UL68 1186 aa13.23□□□□□ -0.29
CACNA1D-216ENST00000636633 CENPBP07199 599 aaPredicted RBP13.22□□□□□ -0.29
CACNA1D-216ENST00000636633 YTHDC1Q96MU7 727 aaKnown RBP13.19□□□□□ -0.3
CACNA1D-216ENST00000636633 PELP1Q8IZL8 1130 aaKnown RBP13.17□□□□□ -0.3
CACNA1D-216ENST00000636633 ARID3CA6NKF2 412 aa13.14□□□□□ -0.31
CACNA1D-216ENST00000636633 MYO15BQ96JP2 1530 aa13.14□□□□□ -0.31
CACNA1D-216ENST00000636633 BAZ1AQ9NRL2 1556 aaPredicted RBP13.12□□□□□ -0.31
CACNA1D-216ENST00000636633 BAZ1BQ9UIG0 1483 aaKnown RBP13.12□□□□□ -0.31
CACNA1D-216ENST00000636633 MROH2BQ7Z745 1585 aa13.07□□□□□ -0.32
CACNA1D-216ENST00000636633 POLR3GLQ9BT43 218 aa13.06□□□□□ -0.32
CACNA1D-216ENST00000636633 TRIM52Q96A61 297 aa13.05□□□□□ -0.32
CACNA1D-216ENST00000636633 WRNQ14191 1432 aaPredicted RBP eCLIP13.04□□□□□ -0.32
CACNA1D-216ENST00000636633 NEUROD1Q13562 356 aa13.02□□□□□ -0.32
CACNA1D-216ENST00000636633 CNGB1Q14028 1251 aaPredicted RBP12.99□□□□□ -0.33
CACNA1D-216ENST00000636633 DIEXFQ68CQ4 756 aaKnown RBP12.96□□□□□ -0.34
CACNA1D-216ENST00000636633 CLIP1P30622 1438 aa12.92□□□□□ -0.34
CACNA1D-216ENST00000636633 ZNF777Q9ULD5 760 aaPredicted RBP12.92□□□□□ -0.34
CACNA1D-216ENST00000636633 EEA1Q15075 1411 aa12.91□□□□□ -0.34
CACNA1D-216ENST00000636633 CCDC88BA6NC98 1476 aa12.91□□□□□ -0.34
CACNA1D-216ENST00000636633 CDK11AQ9UQ88 783 aaPredicted RBP12.9□□□□□ -0.35
CACNA1D-216ENST00000636633 NEFLP07196 543 aa12.89□□□□□ -0.35
CACNA1D-216ENST00000636633 CHMP7Q8WUX9 453 aaPredicted RBP12.88□□□□□ -0.35
CACNA1D-216ENST00000636633 CEP162Q5TB80 1403 aa12.87□□□□□ -0.35
CACNA1D-216ENST00000636633 WIZO95785 1651 aa12.87□□□□□ -0.35
CACNA1D-216ENST00000636633 GOLGA3Q08378 1498 aa12.86□□□□□ -0.35
CACNA1D-216ENST00000636633 ZNF326Q5BKZ1 582 aaKnown RBP12.85□□□□□ -0.35
CACNA1D-216ENST00000636633 KIF27Q86VH2 1401 aa12.85□□□□□ -0.35
CACNA1D-216ENST00000636633 SOGA1O94964 1423 aa12.85□□□□□ -0.35
CACNA1D-216ENST00000636633 ABCC8Q09428 1581 aa12.81□□□□□ -0.36
CACNA1D-216ENST00000636633 TNIKQ9UKE5 1360 aa12.81□□□□□ -0.36
CACNA1D-216ENST00000636633 SMARCA2P51531 1590 aa12.8□□□□□ -0.36
CACNA1D-216ENST00000636633 UNC13AQ9UPW8 1703 aa12.79□□□□□ -0.36
CACNA1D-216ENST00000636633 ZNF316A6NFI3 1004 aaPredicted RBP12.79□□□□□ -0.36
CACNA1D-216ENST00000636633 CHIC2Q9UKJ5 165 aa12.79□□□□□ -0.36
CACNA1D-216ENST00000636633 CEP164Q9UPV0 1460 aa12.78□□□□□ -0.36
CACNA1D-216ENST00000636633 MTUS2Q5JR59 1369 aa12.78□□□□□ -0.36
CACNA1D-216ENST00000636633 ATAD2BQ9ULI0 1458 aa12.75□□□□□ -0.37
CACNA1D-216ENST00000636633 SLC4A1APQ9BWU0 796 aaKnown RBP12.75□□□□□ -0.37
CACNA1D-216ENST00000636633 TOP2AP11388 1531 aaKnown RBP12.75□□□□□ -0.37
CACNA1D-216ENST00000636633 CUX2O14529 1486 aa12.73□□□□□ -0.37
CACNA1D-216ENST00000636633 SMARCA4P51532 1647 aa12.72□□□□□ -0.37
CACNA1D-216ENST00000636633 ERCC6Q03468 1493 aa12.71□□□□□ -0.37
CACNA1D-216ENST00000636633 CARMIL1Q5VZK9 1371 aa12.7□□□□□ -0.38
CACNA1D-216ENST00000636633 NPM1P06748 294 aaKnown RBP eCLIP12.69□□□□□ -0.38
CACNA1D-216ENST00000636633 CADPSQ9ULU8 1353 aa12.66□□□□□ -0.38
CACNA1D-216ENST00000636633 ANP32CO43423 234 aa12.65□□□□□ -0.38
CACNA1D-216ENST00000636633 TONSLQ96HA7 1378 aa12.64□□□□□ -0.39
CACNA1D-216ENST00000636633 TDRD9Q8NDG6 1382 aaKnown RBP12.64□□□□□ -0.39
CACNA1D-216ENST00000636633 TSPY4P0CV99 314 aa12.64□□□□□ -0.39
CACNA1D-216ENST00000636633 TSPY10P0CW01 314 aa12.64□□□□□ -0.39
CACNA1D-216ENST00000636633 RRP7BPQ9NSQ0 103 aa12.63□□□□□ -0.39
CACNA1D-216ENST00000636633 KCNH8Q96L42 1107 aa12.62□□□□□ -0.39
CACNA1D-216ENST00000636633 PDS5BQ9NTI5 1447 aa12.62□□□□□ -0.39
CACNA1D-216ENST00000636633 PLEKHD1A6NEE1 506 aa12.62□□□□□ -0.39
CACNA1D-216ENST00000636633 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.61□□□□□ -0.39
CACNA1D-216ENST00000636633 ERICH6Q7L0X2 663 aa12.6□□□□□ -0.39
CACNA1D-216ENST00000636633 RUSC2Q8N2Y8 1516 aa12.56□□□□□ -0.4
CACNA1D-216ENST00000636633 CHGAP10645 457 aaKnown RBP12.55□□□□□ -0.4
CACNA1D-216ENST00000636633 DDX10Q13206 875 aaKnown RBP12.55□□□□□ -0.4
CACNA1D-216ENST00000636633 CFDP1Q9UEE9 299 aaPredicted RBP12.54□□□□□ -0.4
CACNA1D-216ENST00000636633 GTF3C3Q9Y5Q9 886 aa12.54□□□□□ -0.4
CACNA1D-216ENST00000636633 KANK4Q5T7N3 995 aaPredicted RBP12.53□□□□□ -0.4
CACNA1D-216ENST00000636633 EIF4G1Q04637 1599 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms