RNA–Protein interactions for RNA: ENST00000635945.1

SCN2A-208, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 3,119 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-208ENST00000635945 LAMC3Q9Y6N6 1575 aa10.59□□□□□ -0.71
SCN2A-208ENST00000635945 ANP32CO43423 234 aa10.58□□□□□ -0.72
SCN2A-208ENST00000635945 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.58□□□□□ -0.72
SCN2A-208ENST00000635945 PAK3O75914 559 aaPredicted RBP10.58□□□□□ -0.72
SCN2A-208ENST00000635945 B4GALNT3Q6L9W6 998 aa10.58□□□□□ -0.72
SCN2A-208ENST00000635945 SENP3-EIF4A1A0A087X0R7 540 aa10.57□□□□□ -0.72
SCN2A-208ENST00000635945 FANCIQ9NVI1 1328 aa10.56□□□□□ -0.72
SCN2A-208ENST00000635945 CNGB1Q14028 1251 aaPredicted RBP10.55□□□□□ -0.72
SCN2A-208ENST00000635945 IL27Q8NEV9 243 aa10.54□□□□□ -0.72
SCN2A-208ENST00000635945 RAPGEF2Q9Y4G8 1499 aa10.54□□□□□ -0.72
SCN2A-208ENST00000635945 PPP1R15AO75807 674 aaPredicted RBP10.53□□□□□ -0.72
SCN2A-208ENST00000635945 WDR97A6NE52 1622 aa10.51□□□□□ -0.73
SCN2A-208ENST00000635945 CEP164Q9UPV0 1460 aa10.51□□□□□ -0.73
SCN2A-208ENST00000635945 EEA1Q15075 1411 aa10.5□□□□□ -0.73
SCN2A-208ENST00000635945 RAB3GAP2Q9H2M9 1393 aa10.49□□□□□ -0.73
SCN2A-208ENST00000635945 FAM50AQ14320 339 aaKnown RBP10.49□□□□□ -0.73
SCN2A-208ENST00000635945 KIF21BO75037 1637 aa10.48□□□□□ -0.73
SCN2A-208ENST00000635945 NOP58Q9Y2X3 529 aaKnown RBP10.48□□□□□ -0.73
SCN2A-208ENST00000635945 ATP1B4Q9UN42 357 aaPredicted RBP10.47□□□□□ -0.73
SCN2A-208ENST00000635945 THOC2Q8NI27 1593 aaKnown RBP10.46□□□□□ -0.74
SCN2A-208ENST00000635945 CCDC184Q52MB2 194 aa10.45□□□□□ -0.74
SCN2A-208ENST00000635945 FAM9BQ8IZU0 186 aa10.45□□□□□ -0.74
SCN2A-208ENST00000635945 CFTRP13569 1480 aa10.44□□□□□ -0.74
SCN2A-208ENST00000635945 KIF21AQ7Z4S6 1674 aa10.44□□□□□ -0.74
SCN2A-208ENST00000635945 CCNB3Q8WWL7 1395 aa10.44□□□□□ -0.74
SCN2A-208ENST00000635945 CCER2I3L3R5 266 aa10.44□□□□□ -0.74
SCN2A-208ENST00000635945 NPM2Q86SE8 214 aaKnown RBP10.43□□□□□ -0.74
SCN2A-208ENST00000635945 RTL5Q5HYW3 569 aaPredicted RBP10.43□□□□□ -0.74
SCN2A-208ENST00000635945 MAPKBP1O60336 1514 aa10.42□□□□□ -0.74
SCN2A-208ENST00000635945 PPP4R2Q9NY27 417 aa10.42□□□□□ -0.74
SCN2A-208ENST00000635945 SYNJ1O43426 1573 aa10.4□□□□□ -0.74
SCN2A-208ENST00000635945 LAS1LQ9Y4W2 734 aaKnown RBP10.4□□□□□ -0.74
SCN2A-208ENST00000635945 EIF5BO60841 1220 aaKnown RBP10.39□□□□□ -0.75
SCN2A-208ENST00000635945 MYT1LQ9UL68 1186 aa10.38□□□□□ -0.75
SCN2A-208ENST00000635945 ARAP1Q96P48 1450 aa10.37□□□□□ -0.75
SCN2A-208ENST00000635945 P3H3Q8IVL6 736 aa10.37□□□□□ -0.75
SCN2A-208ENST00000635945 WDR62O43379 1518 aa10.37□□□□□ -0.75
SCN2A-208ENST00000635945 ZBTB47Q9UFB7 747 aaPredicted RBP10.36□□□□□ -0.75
SCN2A-208ENST00000635945 RRBP1Q9P2E9 1410 aaKnown RBP10.36□□□□□ -0.75
SCN2A-208ENST00000635945 CADPSQ9ULU8 1353 aa10.35□□□□□ -0.75
SCN2A-208ENST00000635945 ANP32AP39687 249 aaKnown RBP10.34□□□□□ -0.75
SCN2A-208ENST00000635945 SETD5Q9C0A6 1442 aa10.33□□□□□ -0.76
SCN2A-208ENST00000635945 CUX2O14529 1486 aa10.33□□□□□ -0.76
SCN2A-208ENST00000635945 TONSLQ96HA7 1378 aa10.32□□□□□ -0.76
SCN2A-208ENST00000635945 MRS2Q9HD23 443 aa10.32□□□□□ -0.76
SCN2A-208ENST00000635945 IPO9Q96P70 1041 aaKnown RBP10.31□□□□□ -0.76
SCN2A-208ENST00000635945 NEFMP07197 916 aa10.31□□□□□ -0.76
SCN2A-208ENST00000635945 BRPF3Q9ULD4 1205 aa10.31□□□□□ -0.76
SCN2A-208ENST00000635945 POLR3GLQ9BT43 218 aa10.3□□□□□ -0.76
SCN2A-208ENST00000635945 NESP48681 1621 aa10.29□□□□□ -0.76
SCN2A-208ENST00000635945 PDS5BQ9NTI5 1447 aa10.29□□□□□ -0.76
SCN2A-208ENST00000635945 BIVM-ERCC5R4GMW8 1640 aa10.29□□□□□ -0.76
SCN2A-208ENST00000635945 AKNAQ7Z591 1439 aa10.28□□□□□ -0.76
SCN2A-208ENST00000635945 WASHC2AQ641Q2 1341 aa10.28□□□□□ -0.76
SCN2A-208ENST00000635945 PHLDB1Q86UU1 1377 aa10.27□□□□□ -0.77
SCN2A-208ENST00000635945 HSPA5P11021 654 aaKnown RBP10.27□□□□□ -0.77
SCN2A-208ENST00000635945 SKAP1Q86WV1 359 aa10.26□□□□□ -0.77
SCN2A-208ENST00000635945 MRC2Q9UBG0 1479 aa10.26□□□□□ -0.77
SCN2A-208ENST00000635945 ERICH6BQ5W0A0 696 aa10.26□□□□□ -0.77
SCN2A-208ENST00000635945 DNMBPQ6XZF7 1577 aa10.25□□□□□ -0.77
SCN2A-208ENST00000635945 C11orf95C9JLR9 678 aaPredicted RBP10.24□□□□□ -0.77
SCN2A-208ENST00000635945 TIMELESSQ9UNS1 1208 aa10.24□□□□□ -0.77
SCN2A-208ENST00000635945 FANCD2Q9BXW9 1451 aa10.23□□□□□ -0.77
SCN2A-208ENST00000635945 SLC4A3P48751 1232 aa10.23□□□□□ -0.77
SCN2A-208ENST00000635945 ARHGAP35Q9NRY4 1499 aa10.21□□□□□ -0.77
SCN2A-208ENST00000635945 FOXD1Q16676 465 aa10.21□□□□□ -0.78
SCN2A-208ENST00000635945 PRKRIP1Q9H875 184 aaPredicted RBP10.2□□□□□ -0.78
SCN2A-208ENST00000635945 URB2Q14146 1524 aaKnown RBP10.2□□□□□ -0.78
SCN2A-208ENST00000635945 TARBP1Q13395 1621 aaKnown RBP10.2□□□□□ -0.78
SCN2A-208ENST00000635945 UBE2Q2Q8WVN8 375 aa10.2□□□□□ -0.78
SCN2A-208ENST00000635945 CHIC2Q9UKJ5 165 aa10.19□□□□□ -0.78
SCN2A-208ENST00000635945 TOP2BQ02880 1626 aa10.18□□□□□ -0.78
SCN2A-208ENST00000635945 ZBED9Q6R2W3 1325 aa10.18□□□□□ -0.78
SCN2A-208ENST00000635945 PRXQ9BXM0 1461 aa10.17□□□□□ -0.78
SCN2A-208ENST00000635945 RRP7BPQ9NSQ0 103 aa10.16□□□□□ -0.78
SCN2A-208ENST00000635945 EIF4G2P78344 907 aaKnown RBP eCLIP10.16□□□□□ -0.78
SCN2A-208ENST00000635945 TOPBP1Q92547 1522 aa10.15□□□□□ -0.78
SCN2A-208ENST00000635945 EXOC6Q8TAG9 804 aa10.15□□□□□ -0.79
SCN2A-208ENST00000635945 PDE4AP27815 886 aa10.14□□□□□ -0.79
SCN2A-208ENST00000635945 ARXQ96QS3 562 aa10.13□□□□□ -0.79
SCN2A-208ENST00000635945 FRAT1Q92837 279 aaPredicted RBP10.13□□□□□ -0.79
SCN2A-208ENST00000635945 CUX1P39880 1505 aa10.13□□□□□ -0.79
SCN2A-208ENST00000635945 ZNF326Q5BKZ1 582 aaKnown RBP10.13□□□□□ -0.79
SCN2A-208ENST00000635945 ERCC6Q03468 1493 aa10.13□□□□□ -0.79
SCN2A-208ENST00000635945 LRRC9Q6ZRR7 1453 aa10.12□□□□□ -0.79
SCN2A-208ENST00000635945 AQRO60306 1485 aaKnown RBP eCLIP10.11□□□□□ -0.79
SCN2A-208ENST00000635945 NUDCQ9Y266 331 aa10.11□□□□□ -0.79
SCN2A-208ENST00000635945 ABCA5Q8WWZ7 1642 aa10.11□□□□□ -0.79
SCN2A-208ENST00000635945 GSE1Q14687 1217 aa10.11□□□□□ -0.79
SCN2A-208ENST00000635945 TIAM1Q13009 1591 aa10.1□□□□□ -0.79
SCN2A-208ENST00000635945 L3MBTL2Q969R5 705 aa10.1□□□□□ -0.79
SCN2A-208ENST00000635945 PLIN1O60240 522 aa10.1□□□□□ -0.79
SCN2A-208ENST00000635945 CNTLNQ9NXG0 1405 aa10.1□□□□□ -0.79
SCN2A-208ENST00000635945 CCDC18Q5T9S5 1454 aa10.09□□□□□ -0.79
SCN2A-208ENST00000635945 NFKBIBQ15653 356 aa10.09□□□□□ -0.79
SCN2A-208ENST00000635945 ERICH3Q5RHP9 1530 aa10.08□□□□□ -0.8
SCN2A-208ENST00000635945 IFT140Q96RY7 1462 aa10.08□□□□□ -0.8
SCN2A-208ENST00000635945 ARID3CA6NKF2 412 aa10.08□□□□□ -0.8
SCN2A-208ENST00000635945 PTPRKQ15262 1439 aa10.08□□□□□ -0.8
SCN2A-208ENST00000635945 KIF27Q86VH2 1401 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms