RNA–Protein interactions for RNA: ENST00000635761.1

CLN5-204, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 4

Gene CLN5, Length 549 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-204ENST00000635761 NESP48681 1621 aa14.06□□□□□ -0.16
CLN5-204ENST00000635761 PLCD3Q8N3E9 789 aa14.05□□□□□ -0.16
CLN5-204ENST00000635761 PLEKHG5O94827 1062 aa14.04□□□□□ -0.16
CLN5-204ENST00000635761 MIER1Q8N108 512 aa14.04□□□□□ -0.16
CLN5-204ENST00000635761 PIP4P2Q8N4L2 257 aa14.03□□□□□ -0.16
CLN5-204ENST00000635761 KIF21AQ7Z4S6 1674 aa14.03□□□□□ -0.16
CLN5-204ENST00000635761 BAZ1BQ9UIG0 1483 aaKnown RBP14.01□□□□□ -0.17
CLN5-204ENST00000635761 CREBZFQ9NS37 354 aa14.01□□□□□ -0.17
CLN5-204ENST00000635761 THOC2Q8NI27 1593 aaKnown RBP14□□□□□ -0.17
CLN5-204ENST00000635761 LAMC3Q9Y6N6 1575 aa14□□□□□ -0.17
CLN5-204ENST00000635761 PRKAR2AP13861 404 aaKnown RBP13.99□□□□□ -0.17
CLN5-204ENST00000635761 MROH2BQ7Z745 1585 aa13.96□□□□□ -0.17
CLN5-204ENST00000635761 CHADLQ6NUI6 762 aa13.95□□□□□ -0.18
CLN5-204ENST00000635761 ZBTB47Q9UFB7 747 aaPredicted RBP13.93□□□□□ -0.18
CLN5-204ENST00000635761 IFNLR1Q8IU57 520 aaPredicted RBP13.89□□□□□ -0.19
CLN5-204ENST00000635761 KLHL34Q8N239 644 aa13.88□□□□□ -0.19
CLN5-204ENST00000635761 WIZO95785 1651 aa13.88□□□□□ -0.19
CLN5-204ENST00000635761 FARP1Q9Y4F1 1045 aaPredicted RBP13.86□□□□□ -0.19
CLN5-204ENST00000635761 MNX1P50219 401 aaPredicted RBP13.85□□□□□ -0.19
CLN5-204ENST00000635761 NPM1P06748 294 aaKnown RBP eCLIP13.83□□□□□ -0.2
CLN5-204ENST00000635761 PDS5BQ9NTI5 1447 aa13.82□□□□□ -0.2
CLN5-204ENST00000635761 CADPSQ9ULU8 1353 aa13.76□□□□□ -0.21
CLN5-204ENST00000635761 SPOCK2Q92563 424 aa13.76□□□□□ -0.21
CLN5-204ENST00000635761 PRDM2Q13029 1718 aa13.74□□□□□ -0.21
CLN5-204ENST00000635761 WDR62O43379 1518 aa13.74□□□□□ -0.21
CLN5-204ENST00000635761 MRC2Q9UBG0 1479 aa13.72□□□□□ -0.21
CLN5-204ENST00000635761 NUBP1P53384 320 aa13.68□□□□□ -0.22
CLN5-204ENST00000635761 CEP164Q9UPV0 1460 aa13.65□□□□□ -0.22
CLN5-204ENST00000635761 RASEFQ8IZ41 740 aa13.63□□□□□ -0.23
CLN5-204ENST00000635761 FANCD2Q9BXW9 1451 aa13.62□□□□□ -0.23
CLN5-204ENST00000635761 FAM212AQ96EL1 285 aa13.62□□□□□ -0.23
CLN5-204ENST00000635761 CFTRP13569 1480 aa13.61□□□□□ -0.23
CLN5-204ENST00000635761 PAK3O75914 559 aaPredicted RBP13.61□□□□□ -0.23
CLN5-204ENST00000635761 TOP2AP11388 1531 aaKnown RBP13.6□□□□□ -0.23
CLN5-204ENST00000635761 C19orf67A6NJJ6 358 aa13.6□□□□□ -0.23
CLN5-204ENST00000635761 CD44P16070 742 aaKnown RBP13.6□□□□□ -0.23
CLN5-204ENST00000635761 RSF1Q96T23 1441 aaPredicted RBP13.59□□□□□ -0.23
CLN5-204ENST00000635761 HAX1O00165 279 aa13.59□□□□□ -0.23
CLN5-204ENST00000635761 GSE1Q14687 1217 aa13.57□□□□□ -0.24
CLN5-204ENST00000635761 TSPYL2Q9H2G4 693 aaPredicted RBP13.56□□□□□ -0.24
CLN5-204ENST00000635761 DCAF8Q5TAQ9 597 aa13.55□□□□□ -0.24
CLN5-204ENST00000635761 URB2Q14146 1524 aaKnown RBP13.54□□□□□ -0.24
CLN5-204ENST00000635761 CIZ1Q9ULV3 898 aaPredicted RBP13.54□□□□□ -0.24
CLN5-204ENST00000635761 TRIM41Q8WV44 630 aa13.53□□□□□ -0.24
CLN5-204ENST00000635761 AMER1Q5JTC6 1135 aaPredicted RBP13.51□□□□□ -0.25
CLN5-204ENST00000635761 ZRANB1Q9UGI0 708 aa13.51□□□□□ -0.25
CLN5-204ENST00000635761 CCDC61Q9Y6R9 512 aa13.46□□□□□ -0.25
CLN5-204ENST00000635761 CCDC88BA6NC98 1476 aa13.44□□□□□ -0.26
CLN5-204ENST00000635761 ZNF579Q8NAF0 562 aaKnown RBP13.44□□□□□ -0.26
CLN5-204ENST00000635761 EVX2Q03828 476 aa13.43□□□□□ -0.26
CLN5-204ENST00000635761 PKD2Q13563 968 aa13.42□□□□□ -0.26
CLN5-204ENST00000635761 RTN4Q9NQC3 1192 aaKnown RBP13.42□□□□□ -0.26
CLN5-204ENST00000635761 RIMBP3CA6NJZ7 1639 aa13.42□□□□□ -0.26
CLN5-204ENST00000635761 RIMBP3BA6NNM3 1639 aa13.42□□□□□ -0.26
CLN5-204ENST00000635761 RIMBP3Q9UFD9 1639 aa13.42□□□□□ -0.26
CLN5-204ENST00000635761 CHD1O14646 1710 aa13.4□□□□□ -0.26
CLN5-204ENST00000635761 PHF12Q96QT6 1004 aa13.38□□□□□ -0.27
CLN5-204ENST00000635761 TOPBP1Q92547 1522 aa13.38□□□□□ -0.27
CLN5-204ENST00000635761 ZNF608Q9ULD9 1512 aaPredicted RBP13.38□□□□□ -0.27
CLN5-204ENST00000635761 PYGBP11216 843 aa13.37□□□□□ -0.27
CLN5-204ENST00000635761 CHRM1P11229 460 aaPredicted RBP13.37□□□□□ -0.27
CLN5-204ENST00000635761 EIF4G3O43432 1585 aaKnown RBP13.37□□□□□ -0.27
CLN5-204ENST00000635761 IFT140Q96RY7 1462 aa13.36□□□□□ -0.27
CLN5-204ENST00000635761 ECM2O94769 699 aaPredicted RBP13.36□□□□□ -0.27
CLN5-204ENST00000635761 ABCC8Q09428 1581 aa13.36□□□□□ -0.27
CLN5-204ENST00000635761 TARBP1Q13395 1621 aaKnown RBP13.35□□□□□ -0.27
CLN5-204ENST00000635761 DNMBPQ6XZF7 1577 aa13.35□□□□□ -0.27
CLN5-204ENST00000635761 CLCN6P51797 869 aa13.33□□□□□ -0.28
CLN5-204ENST00000635761 KIF12Q96FN5 646 aa13.33□□□□□ -0.28
CLN5-204ENST00000635761 SGIP1Q9BQI5 828 aa13.3□□□□□ -0.28
CLN5-204ENST00000635761 MAP3K13O43283 966 aa13.29□□□□□ -0.28
CLN5-204ENST00000635761 ARHGEF11O15085 1522 aa13.29□□□□□ -0.28
CLN5-204ENST00000635761 SP7Q8TDD2 431 aaPredicted RBP13.28□□□□□ -0.28
CLN5-204ENST00000635761 PCDHB13Q9Y5F0 798 aa13.27□□□□□ -0.29
CLN5-204ENST00000635761 ZNF467Q7Z7K2 595 aaPredicted RBP13.24□□□□□ -0.29
CLN5-204ENST00000635761 AQRO60306 1485 aaKnown RBP eCLIP13.23□□□□□ -0.29
CLN5-204ENST00000635761 MS4A3Q96HJ5 214 aa13.22□□□□□ -0.29
CLN5-204ENST00000635761 POLA1P09884 1462 aaPredicted RBP13.22□□□□□ -0.29
CLN5-204ENST00000635761 RGL2O15211 777 aa13.21□□□□□ -0.29
CLN5-204ENST00000635761 RIOK3O14730 519 aaKnown RBP13.2□□□□□ -0.3
CLN5-204ENST00000635761 GABBR2O75899 941 aa13.2□□□□□ -0.3
CLN5-204ENST00000635761 IFNL1Q8IU54 200 aa13.2□□□□□ -0.3
CLN5-204ENST00000635761 RNF25Q96BH1 459 aaPredicted RBP13.2□□□□□ -0.3
CLN5-204ENST00000635761 WDR97A6NE52 1622 aa13.18□□□□□ -0.3
CLN5-204ENST00000635761 GALR2O43603 387 aaPredicted RBP13.18□□□□□ -0.3
CLN5-204ENST00000635761 PCDHB8Q9UN66 801 aa13.18□□□□□ -0.3
CLN5-204ENST00000635761 RAD54L2Q9Y4B4 1467 aa13.16□□□□□ -0.3
CLN5-204ENST00000635761 PBRM1Q86U86 1689 aa13.16□□□□□ -0.3
CLN5-204ENST00000635761 TAOK2Q9UL54 1235 aa13.16□□□□□ -0.3
CLN5-204ENST00000635761 CYB5RLQ6IPT4 315 aa13.15□□□□□ -0.3
CLN5-204ENST00000635761 SOGA1O94964 1423 aa13.14□□□□□ -0.31
CLN5-204ENST00000635761 ARAP1Q96P48 1450 aa13.13□□□□□ -0.31
CLN5-204ENST00000635761 VGFO15240 615 aaPredicted RBP13.13□□□□□ -0.31
CLN5-204ENST00000635761 CUX1P39880 1505 aa13.13□□□□□ -0.31
CLN5-204ENST00000635761 FGD5Q6ZNL6 1462 aa13.12□□□□□ -0.31
CLN5-204ENST00000635761 TDRD9Q8NDG6 1382 aaKnown RBP13.11□□□□□ -0.31
CLN5-204ENST00000635761 PDAP1Q13442 181 aaKnown RBP13.11□□□□□ -0.31
CLN5-204ENST00000635761 CLASP1Q7Z460 1538 aa13.11□□□□□ -0.31
CLN5-204ENST00000635761 SYNJ1O43426 1573 aa13.08□□□□□ -0.32
CLN5-204ENST00000635761 PSEN1P49768 467 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms