RNA–Protein interactions for RNA: ENST00000635761.1

CLN5-204, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 4

Gene CLN5, Length 549 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-204ENST00000635761 AEBP2Q6ZN18 517 aaPredicted RBP26.25■■□□□ 1.79
CLN5-204ENST00000635761 CHIC1Q5VXU3 224 aa25.67■■□□□ 1.7
CLN5-204ENST00000635761 PHF23Q9BUL5 403 aaPredicted RBP22.53■■□□□ 1.2
CLN5-204ENST00000635761 SENP3Q9H4L4 574 aaPredicted RBP22.34■■□□□ 1.17
CLN5-204ENST00000635761 PLPPR3Q6T4P5 718 aa20.86■□□□□ 0.93
CLN5-204ENST00000635761 FOXD1Q16676 465 aa20.68■□□□□ 0.9
CLN5-204ENST00000635761 ADRA2BP18089 450 aa19.87■□□□□ 0.77
CLN5-204ENST00000635761 PPP6R1Q9UPN7 881 aa19.87■□□□□ 0.77
CLN5-204ENST00000635761 PIAS4Q8N2W9 510 aaPredicted RBP19.53■□□□□ 0.72
CLN5-204ENST00000635761 MSH5O43196 834 aa19.14■□□□□ 0.65
CLN5-204ENST00000635761 PPP4R3CPQ6ZMV5 832 aa18.35■□□□□ 0.53
CLN5-204ENST00000635761 POTEDQ86YR6 584 aa18.32■□□□□ 0.52
CLN5-204ENST00000635761 SCAF1Q9H7N4 1312 aaKnown RBP18.25■□□□□ 0.51
CLN5-204ENST00000635761 NISCHQ9Y2I1 1504 aa18.13■□□□□ 0.49
CLN5-204ENST00000635761 MAPK8IP2Q13387 824 aaPredicted RBP18.01■□□□□ 0.47
CLN5-204ENST00000635761 NCBP3Q53F19 620 aaKnown RBP17.92■□□□□ 0.46
CLN5-204ENST00000635761 KCNA4P22459 653 aa17.9■□□□□ 0.46
CLN5-204ENST00000635761 CNKSR2Q8WXI2 1034 aa17.86■□□□□ 0.45
CLN5-204ENST00000635761 DMRT2Q9Y5R5 561 aa17.82■□□□□ 0.44
CLN5-204ENST00000635761 NPM3O75607 178 aaKnown RBP17.6■□□□□ 0.41
CLN5-204ENST00000635761 RNF216Q9NWF9 866 aaPredicted RBP17.52■□□□□ 0.4
CLN5-204ENST00000635761 HOXD11P31277 338 aaPredicted RBP17.44■□□□□ 0.38
CLN5-204ENST00000635761 DNAJC5BQ9UF47 199 aa17.14■□□□□ 0.33
CLN5-204ENST00000635761 SLC4A1APQ9BWU0 796 aaKnown RBP17.08■□□□□ 0.32
CLN5-204ENST00000635761 DCAF8L1A6NGE4 600 aa17.04■□□□□ 0.32
CLN5-204ENST00000635761 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.63■□□□□ 0.25
CLN5-204ENST00000635761 SLC4A2P04920 1241 aa16.61■□□□□ 0.25
CLN5-204ENST00000635761 EHMT2Q96KQ7 1210 aa16.55■□□□□ 0.24
CLN5-204ENST00000635761 FOXD4L1Q9NU39 408 aa16.52■□□□□ 0.24
CLN5-204ENST00000635761 ZBTB22O15209 634 aa16.45■□□□□ 0.22
CLN5-204ENST00000635761 CCDC180Q9P1Z9 1646 aa16.43■□□□□ 0.22
CLN5-204ENST00000635761 RNF39Q9H2S5 420 aa16.37■□□□□ 0.21
CLN5-204ENST00000635761 ABCC9O60706 1549 aa16.36■□□□□ 0.21
CLN5-204ENST00000635761 CSRNP3Q8WYN3 585 aa16.36■□□□□ 0.21
CLN5-204ENST00000635761 U3KPZ7 1027 aaPredicted RBP16.34■□□□□ 0.21
CLN5-204ENST00000635761 MYCNP04198 464 aaPredicted RBP16.31■□□□□ 0.2
CLN5-204ENST00000635761 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.2■□□□□ 0.18
CLN5-204ENST00000635761 C1QBPQ07021 282 aaKnown RBP16.2■□□□□ 0.18
CLN5-204ENST00000635761 HNRNPUL2Q1KMD3 747 aaKnown RBP16.2■□□□□ 0.18
CLN5-204ENST00000635761 SAMD1Q6SPF0 538 aaPredicted RBP16.13■□□□□ 0.17
CLN5-204ENST00000635761 APLP2Q06481 763 aa16.05■□□□□ 0.16
CLN5-204ENST00000635761 ATXN8OSP0DMR3 200 aa15.96■□□□□ 0.15
CLN5-204ENST00000635761 CACNB1Q02641 598 aaPredicted RBP15.95■□□□□ 0.14
CLN5-204ENST00000635761 SPINK5Q9NQ38 1064 aaPredicted RBP15.87■□□□□ 0.13
CLN5-204ENST00000635761 CAPN15O75808 1086 aa15.84■□□□□ 0.13
CLN5-204ENST00000635761 ZNF219Q9P2Y4 722 aaPredicted RBP15.8■□□□□ 0.12
CLN5-204ENST00000635761 ATF5Q9Y2D1 282 aaPredicted RBP15.8■□□□□ 0.12
CLN5-204ENST00000635761 TRHP20396 242 aaPredicted RBP15.75■□□□□ 0.11
CLN5-204ENST00000635761 RB1CC1Q8TDY2 1594 aa15.61■□□□□ 0.09
CLN5-204ENST00000635761 DSG3P32926 999 aa15.57■□□□□ 0.08
CLN5-204ENST00000635761 ABCB7O75027 752 aa15.51■□□□□ 0.07
CLN5-204ENST00000635761 UNC13AQ9UPW8 1703 aa15.5■□□□□ 0.07
CLN5-204ENST00000635761 POLA2Q14181 598 aa15.49■□□□□ 0.07
CLN5-204ENST00000635761 NACADO15069 1562 aa15.47■□□□□ 0.07
CLN5-204ENST00000635761 ZBTB12Q9Y330 459 aaPredicted RBP15.3■□□□□ 0.04
CLN5-204ENST00000635761 DCAF8L2P0C7V8 631 aa15.24■□□□□ 0.03
CLN5-204ENST00000635761 FBLN2P98095 1184 aa15.22■□□□□ 0.03
CLN5-204ENST00000635761 MYO15BQ96JP2 1530 aa15.21■□□□□ 0.03
CLN5-204ENST00000635761 BICRAQ9NZM4 1560 aa15.2■□□□□ 0.02
CLN5-204ENST00000635761 PABPN1Q86U42 306 aaKnown RBP eCLIP15.17■□□□□ 0.02
CLN5-204ENST00000635761 MKRN4PQ13434 485 aaPredicted RBP15.13■□□□□ 0.01
CLN5-204ENST00000635761 DCAF1Q9Y4B6 1507 aa14.99□□□□□ -0.01
CLN5-204ENST00000635761 ZCCHC6Q5VYS8 1495 aaKnown RBP14.97□□□□□ -0.01
CLN5-204ENST00000635761 OSCARQ8IYS5 282 aa14.97□□□□□ -0.01
CLN5-204ENST00000635761 SHROOM4Q9ULL8 1493 aa14.89□□□□□ -0.03
CLN5-204ENST00000635761 RBM42Q9BTD8 480 aaKnown RBP14.89□□□□□ -0.03
CLN5-204ENST00000635761 CC2D2AQ9P2K1 1620 aa14.88□□□□□ -0.03
CLN5-204ENST00000635761 SCRIBQ14160 1630 aa14.86□□□□□ -0.03
CLN5-204ENST00000635761 SPDYE2BA6NHP3 402 aa14.86□□□□□ -0.03
CLN5-204ENST00000635761 SPDYE6P0CI01 402 aa14.86□□□□□ -0.03
CLN5-204ENST00000635761 SPDYE2Q495Y8 402 aa14.86□□□□□ -0.03
CLN5-204ENST00000635761 SPDYE4A6NLX3 237 aa14.82□□□□□ -0.04
CLN5-204ENST00000635761 FKBP8Q14318 412 aa14.81□□□□□ -0.04
CLN5-204ENST00000635761 EIF4G1Q04637 1599 aaKnown RBP14.78□□□□□ -0.04
CLN5-204ENST00000635761 ZNF692Q9BU19 519 aaPredicted RBP14.78□□□□□ -0.04
CLN5-204ENST00000635761 CECR2Q9BXF3 1484 aa14.75□□□□□ -0.05
CLN5-204ENST00000635761 SSUH2Q9Y2M2 353 aa14.73□□□□□ -0.05
CLN5-204ENST00000635761 AKT1S1Q96B36 256 aa14.68□□□□□ -0.06
CLN5-204ENST00000635761 PROM2Q8N271 834 aa14.57□□□□□ -0.08
CLN5-204ENST00000635761 REM2Q8IYK8 340 aaPredicted RBP14.51□□□□□ -0.09
CLN5-204ENST00000635761 SPDYE1Q8NFV5 336 aaPredicted RBP14.43□□□□□ -0.1
CLN5-204ENST00000635761 STAG3Q9UJ98 1225 aa14.37□□□□□ -0.11
CLN5-204ENST00000635761 PITPNM1O00562 1244 aa14.34□□□□□ -0.11
CLN5-204ENST00000635761 FBXO3Q9UK99 471 aa14.34□□□□□ -0.11
CLN5-204ENST00000635761 CLEC11AQ9Y240 323 aa14.33□□□□□ -0.12
CLN5-204ENST00000635761 DNAJC5Q9H3Z4 198 aa14.27□□□□□ -0.13
CLN5-204ENST00000635761 NCAPD3P42695 1498 aa14.25□□□□□ -0.13
CLN5-204ENST00000635761 POTEHQ6S545 545 aa14.24□□□□□ -0.13
CLN5-204ENST00000635761 CHRDL2Q6WN34 429 aa14.24□□□□□ -0.13
CLN5-204ENST00000635761 PRR29P0C7W0 189 aa14.21□□□□□ -0.13
CLN5-204ENST00000635761 SMARCA4P51532 1647 aa14.2□□□□□ -0.14
CLN5-204ENST00000635761 ATAD2BQ9ULI0 1458 aa14.17□□□□□ -0.14
CLN5-204ENST00000635761 SMARCA2P51531 1590 aa14.16□□□□□ -0.14
CLN5-204ENST00000635761 CUX2O14529 1486 aa14.15□□□□□ -0.14
CLN5-204ENST00000635761 HMGXB3Q12766 1538 aa14.15□□□□□ -0.14
CLN5-204ENST00000635761 VASPP50552 380 aaPredicted RBP14.12□□□□□ -0.15
CLN5-204ENST00000635761 ERCC6Q03468 1493 aa14.1□□□□□ -0.15
CLN5-204ENST00000635761 FXR2P51116 673 aaKnown RBP eCLIP14.08□□□□□ -0.16
CLN5-204ENST00000635761 PEG3Q9GZU2 1588 aa14.08□□□□□ -0.16
CLN5-204ENST00000635761 BAZ1AQ9NRL2 1556 aaPredicted RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms