RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 PRXQ9BXM0 1461 aa25.81■■□□□ 1.72
CLN6-211ENST00000635754 CSRNP3Q8WYN3 585 aa25.8■■□□□ 1.72
CLN6-211ENST00000635754 SHROOM2Q13796 1616 aa25.79■■□□□ 1.72
CLN6-211ENST00000635754 KIAA0586Q9BVV6 1533 aa25.78■■□□□ 1.72
CLN6-211ENST00000635754 FAM9AQ8IZU1 332 aaPredicted RBP25.75■■□□□ 1.71
CLN6-211ENST00000635754 IQGAP2Q13576 1575 aa25.7■■□□□ 1.7
CLN6-211ENST00000635754 CTTNBP2Q8WZ74 1663 aa25.7■■□□□ 1.7
CLN6-211ENST00000635754 JPH4Q96JJ6 628 aa25.68■■□□□ 1.7
CLN6-211ENST00000635754 ARAP1Q96P48 1450 aa25.66■■□□□ 1.7
CLN6-211ENST00000635754 KIF21BO75037 1637 aa25.66■■□□□ 1.7
CLN6-211ENST00000635754 ERCC6L2Q5T890 1561 aa25.66■■□□□ 1.7
CLN6-211ENST00000635754 PRG4Q92954 1404 aaPredicted RBP25.65■■□□□ 1.7
CLN6-211ENST00000635754 CYB5RLQ6IPT4 315 aa25.58■■□□□ 1.69
CLN6-211ENST00000635754 SENP3Q9H4L4 574 aaPredicted RBP25.58■■□□□ 1.69
CLN6-211ENST00000635754 UGGT2Q9NYU1 1516 aa25.53■■□□□ 1.68
CLN6-211ENST00000635754 CARMIL2Q6F5E8 1435 aa25.51■■□□□ 1.67
CLN6-211ENST00000635754 GOLGA3Q08378 1498 aa25.49■■□□□ 1.67
CLN6-211ENST00000635754 DISP1Q96F81 1524 aa25.46■■□□□ 1.67
CLN6-211ENST00000635754 KIAA0556O60303 1618 aa25.44■■□□□ 1.66
CLN6-211ENST00000635754 EHMT2Q96KQ7 1210 aa25.41■■□□□ 1.66
CLN6-211ENST00000635754 PHF23Q9BUL5 403 aaPredicted RBP25.41■■□□□ 1.66
CLN6-211ENST00000635754 TNIKQ9UKE5 1360 aa25.4■■□□□ 1.66
CLN6-211ENST00000635754 UBTFP17480 764 aaKnown RBP25.38■■□□□ 1.65
CLN6-211ENST00000635754 PTPRGP23470 1445 aa25.35■■□□□ 1.65
CLN6-211ENST00000635754 SAMD9Q5K651 1589 aa25.33■■□□□ 1.65
CLN6-211ENST00000635754 TTBK1Q5TCY1 1321 aaPredicted RBP25.31■■□□□ 1.64
CLN6-211ENST00000635754 RANGAP1P46060 587 aaPredicted RBP25.27■■□□□ 1.64
CLN6-211ENST00000635754 ADCY10Q96PN6 1610 aa25.27■■□□□ 1.64
CLN6-211ENST00000635754 EFCAB5A4FU69 1503 aa25.25■■□□□ 1.63
CLN6-211ENST00000635754 P3H3Q8IVL6 736 aa25.21■■□□□ 1.63
CLN6-211ENST00000635754 UACAQ9BZF9 1416 aa25.2■■□□□ 1.62
CLN6-211ENST00000635754 UHRF1BP1LA0JNW5 1464 aa25.18■■□□□ 1.62
CLN6-211ENST00000635754 ABCC2Q92887 1545 aa25.18■■□□□ 1.62
CLN6-211ENST00000635754 FHOD3Q2V2M9 1422 aa25.15■■□□□ 1.62
CLN6-211ENST00000635754 NPM1P06748 294 aaKnown RBP eCLIP25.15■■□□□ 1.62
CLN6-211ENST00000635754 PLB1Q6P1J6 1458 aa25.14■■□□□ 1.61
CLN6-211ENST00000635754 ABCA8O94911 1581 aa25.13■■□□□ 1.61
CLN6-211ENST00000635754 ARHGAP35Q9NRY4 1499 aa25.11■■□□□ 1.61
CLN6-211ENST00000635754 MAPKBP1O60336 1514 aa25.08■■□□□ 1.61
CLN6-211ENST00000635754 RAPGEF6Q8TEU7 1601 aa25.06■■□□□ 1.6
CLN6-211ENST00000635754 KDM5BQ9UGL1 1544 aa25.06■■□□□ 1.6
CLN6-211ENST00000635754 ZCCHC11Q5TAX3 1644 aaKnown RBP25.05■■□□□ 1.6
CLN6-211ENST00000635754 TRHP20396 242 aaPredicted RBP25.03■■□□□ 1.6
CLN6-211ENST00000635754 CLIP1P30622 1438 aa25.03■■□□□ 1.6
CLN6-211ENST00000635754 FMN1Q68DA7 1419 aa25■■□□□ 1.59
CLN6-211ENST00000635754 LOC105371045A0A1W2PR82 267 aa25■■□□□ 1.59
CLN6-211ENST00000635754 CEP162Q5TB80 1403 aa24.95■■□□□ 1.59
CLN6-211ENST00000635754 ASXL2Q76L83 1435 aa24.95■■□□□ 1.58
CLN6-211ENST00000635754 NUP153P49790 1475 aaKnown RBP24.94■■□□□ 1.58
CLN6-211ENST00000635754 KIF13AQ9H1H9 1805 aa24.93■■□□□ 1.58
CLN6-211ENST00000635754 ABCC10Q5T3U5 1492 aa24.92■■□□□ 1.58
CLN6-211ENST00000635754 DIP2BQ9P265 1576 aa24.92■■□□□ 1.58
CLN6-211ENST00000635754 HECW1Q76N89 1606 aa24.9■■□□□ 1.58
CLN6-211ENST00000635754 ATP10BO94823 1461 aa24.9■■□□□ 1.58
CLN6-211ENST00000635754 ARID3CA6NKF2 412 aa24.88■■□□□ 1.57
CLN6-211ENST00000635754 WDR7Q9Y4E6 1490 aa24.87■■□□□ 1.57
CLN6-211ENST00000635754 PCF11O94913 1555 aaKnown RBP24.84■■□□□ 1.57
CLN6-211ENST00000635754 FAM69CQ0P6D2 419 aa24.83■■□□□ 1.57
CLN6-211ENST00000635754 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.82■■□□□ 1.56
CLN6-211ENST00000635754 HNRNPUL2Q1KMD3 747 aaKnown RBP24.82■■□□□ 1.56
CLN6-211ENST00000635754 ATP1B4Q9UN42 357 aaPredicted RBP24.81■■□□□ 1.56
CLN6-211ENST00000635754 CASKIN1Q8WXD9 1431 aa24.81■■□□□ 1.56
CLN6-211ENST00000635754 EPRSP07814 1512 aaKnown RBP24.81■■□□□ 1.56
CLN6-211ENST00000635754 GLI2P10070 1586 aa24.79■■□□□ 1.56
CLN6-211ENST00000635754 CDK13Q14004 1512 aaKnown RBP24.79■■□□□ 1.56
CLN6-211ENST00000635754 FYCO1Q9BQS8 1478 aa24.79■■□□□ 1.56
CLN6-211ENST00000635754 LRRIQ1Q96JM4 1722 aa24.77■■□□□ 1.56
CLN6-211ENST00000635754 CCDC18Q5T9S5 1454 aa24.73■■□□□ 1.55
CLN6-211ENST00000635754 TSPOAP1O95153 1857 aa24.72■■□□□ 1.55
CLN6-211ENST00000635754 KCNH8Q96L42 1107 aa24.71■■□□□ 1.55
CLN6-211ENST00000635754 MAP3K4Q9Y6R4 1608 aa24.71■■□□□ 1.55
CLN6-211ENST00000635754 PLEKHD1A6NEE1 506 aa24.69■■□□□ 1.54
CLN6-211ENST00000635754 CFAP43Q8NDM7 1665 aa24.69■■□□□ 1.54
CLN6-211ENST00000635754 CDK11AQ9UQ88 783 aaPredicted RBP24.66■■□□□ 1.54
CLN6-211ENST00000635754 VPS8Q8N3P4 1428 aa24.65■■□□□ 1.54
CLN6-211ENST00000635754 ABCA9Q8IUA7 1624 aa24.64■■□□□ 1.54
CLN6-211ENST00000635754 PPRC1Q5VV67 1664 aaKnown RBP24.63■■□□□ 1.53
CLN6-211ENST00000635754 CD109Q6YHK3 1445 aa24.6■■□□□ 1.53
CLN6-211ENST00000635754 TEX14Q8IWB6 1497 aa24.59■■□□□ 1.53
CLN6-211ENST00000635754 TROQ12816 1431 aaPredicted RBP24.58■■□□□ 1.52
CLN6-211ENST00000635754 KIF14Q15058 1648 aa24.57■■□□□ 1.52
CLN6-211ENST00000635754 MAGI3Q5TCQ9 1506 aa24.55■■□□□ 1.52
CLN6-211ENST00000635754 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.55■■□□□ 1.52
CLN6-211ENST00000635754 TTC37Q6PGP7 1564 aa24.54■■□□□ 1.52
CLN6-211ENST00000635754 KDM6BO15054 1643 aa24.49■■□□□ 1.51
CLN6-211ENST00000635754 TIAM1Q13009 1591 aa24.48■■□□□ 1.51
CLN6-211ENST00000635754 MYO5CQ9NQX4 1742 aa24.47■■□□□ 1.51
CLN6-211ENST00000635754 MTUS2Q5JR59 1369 aa24.46■■□□□ 1.51
CLN6-211ENST00000635754 EHBP1L1Q8N3D4 1523 aa24.45■■□□□ 1.51
CLN6-211ENST00000635754 CFAP74Q9C0B2 1584 aa24.42■■□□□ 1.5
CLN6-211ENST00000635754 MAP3K1Q13233 1512 aa24.42■■□□□ 1.5
CLN6-211ENST00000635754 NEO1Q92859 1461 aa24.4■■□□□ 1.5
CLN6-211ENST00000635754 ARAP3Q8WWN8 1544 aa24.39■■□□□ 1.49
CLN6-211ENST00000635754 FANCAO15360 1455 aa24.39■■□□□ 1.49
CLN6-211ENST00000635754 PLCH2O75038 1416 aa24.38■■□□□ 1.49
CLN6-211ENST00000635754 PHLDB1Q86UU1 1377 aa24.38■■□□□ 1.49
CLN6-211ENST00000635754 APLP2Q06481 763 aa24.36■■□□□ 1.49
CLN6-211ENST00000635754 PREX2Q70Z35 1606 aa24.36■■□□□ 1.49
CLN6-211ENST00000635754 CDC42BPAQ5VT25 1732 aa24.35■■□□□ 1.49
CLN6-211ENST00000635754 SUPT6HQ7KZ85 1726 aaKnown RBP24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms