RNA–Protein interactions for RNA: ENST00000635299.1

LINC01427-204, Transcript of long intergenic non-protein coding RNA 1427, humanhuman

TSL 5 BASIC

Gene LINC01427, Length 1,978 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01427-204ENST00000635299 UBE2Q2Q8WVN8 375 aa12.27□□□□□ -0.45
LINC01427-204ENST00000635299 RAPGEF2Q9Y4G8 1499 aa12.26□□□□□ -0.45
LINC01427-204ENST00000635299 PEG3Q9GZU2 1588 aa12.25□□□□□ -0.45
LINC01427-204ENST00000635299 RRBP1Q9P2E9 1410 aaKnown RBP12.25□□□□□ -0.45
LINC01427-204ENST00000635299 EIF5BO60841 1220 aaKnown RBP12.23□□□□□ -0.45
LINC01427-204ENST00000635299 ERICH3Q5RHP9 1530 aa12.21□□□□□ -0.45
LINC01427-204ENST00000635299 UNC13AQ9UPW8 1703 aa12.18□□□□□ -0.46
LINC01427-204ENST00000635299 ARAP1Q96P48 1450 aa12.18□□□□□ -0.46
LINC01427-204ENST00000635299 CACNB1Q02641 598 aaPredicted RBP12.18□□□□□ -0.46
LINC01427-204ENST00000635299 ATXN8OSP0DMR3 200 aa12.17□□□□□ -0.46
LINC01427-204ENST00000635299 PRXQ9BXM0 1461 aa12.15□□□□□ -0.46
LINC01427-204ENST00000635299 NEFLP07196 543 aa12.15□□□□□ -0.46
LINC01427-204ENST00000635299 CCNB3Q8WWL7 1395 aa12.15□□□□□ -0.47
LINC01427-204ENST00000635299 MYCNP04198 464 aaPredicted RBP12.14□□□□□ -0.47
LINC01427-204ENST00000635299 KANK4Q5T7N3 995 aaPredicted RBP12.14□□□□□ -0.47
LINC01427-204ENST00000635299 TOP2BQ02880 1626 aa12.14□□□□□ -0.47
LINC01427-204ENST00000635299 HOXD11P31277 338 aaPredicted RBP12.12□□□□□ -0.47
LINC01427-204ENST00000635299 RBM19Q9Y4C8 960 aaKnown RBP12.12□□□□□ -0.47
LINC01427-204ENST00000635299 CCER2I3L3R5 266 aa12.11□□□□□ -0.47
LINC01427-204ENST00000635299 MYT1LQ9UL68 1186 aa12.11□□□□□ -0.47
LINC01427-204ENST00000635299 TIMELESSQ9UNS1 1208 aa12.11□□□□□ -0.47
LINC01427-204ENST00000635299 KCNH8Q96L42 1107 aa12.1□□□□□ -0.47
LINC01427-204ENST00000635299 BCANQ96GW7 911 aa12.09□□□□□ -0.47
LINC01427-204ENST00000635299 BIVM-ERCC5R4GMW8 1640 aa12.09□□□□□ -0.47
LINC01427-204ENST00000635299 RANGAP1P46060 587 aaPredicted RBP12.09□□□□□ -0.47
LINC01427-204ENST00000635299 ERICH6BQ5W0A0 696 aa12.09□□□□□ -0.47
LINC01427-204ENST00000635299 ANO8Q9HCE9 1232 aaPredicted RBP12.09□□□□□ -0.47
LINC01427-204ENST00000635299 MAPKBP1O60336 1514 aa12.08□□□□□ -0.47
LINC01427-204ENST00000635299 PABPN1Q86U42 306 aaKnown RBP eCLIP12.08□□□□□ -0.48
LINC01427-204ENST00000635299 RAB3GAP2Q9H2M9 1393 aa12.07□□□□□ -0.48
LINC01427-204ENST00000635299 PPP1R15AO75807 674 aaPredicted RBP12.07□□□□□ -0.48
LINC01427-204ENST00000635299 ATAD2BQ9ULI0 1458 aa12.06□□□□□ -0.48
LINC01427-204ENST00000635299 MAP3K1Q13233 1512 aa12.06□□□□□ -0.48
LINC01427-204ENST00000635299 BICRAQ9NZM4 1560 aa12.06□□□□□ -0.48
LINC01427-204ENST00000635299 SETD5Q9C0A6 1442 aa12.04□□□□□ -0.48
LINC01427-204ENST00000635299 DDX10Q13206 875 aaKnown RBP12.04□□□□□ -0.48
LINC01427-204ENST00000635299 DMRT2Q9Y5R5 561 aa12.03□□□□□ -0.48
LINC01427-204ENST00000635299 FANCIQ9NVI1 1328 aa12.03□□□□□ -0.48
LINC01427-204ENST00000635299 ANP32CO43423 234 aa12.01□□□□□ -0.49
LINC01427-204ENST00000635299 KIF27Q86VH2 1401 aa12.01□□□□□ -0.49
LINC01427-204ENST00000635299 WDR97A6NE52 1622 aa12□□□□□ -0.49
LINC01427-204ENST00000635299 ARHGAP35Q9NRY4 1499 aa12□□□□□ -0.49
LINC01427-204ENST00000635299 ATF5Q9Y2D1 282 aaPredicted RBP11.97□□□□□ -0.49
LINC01427-204ENST00000635299 ITGAEP38570 1179 aa11.96□□□□□ -0.49
LINC01427-204ENST00000635299 TIAM1Q13009 1591 aa11.96□□□□□ -0.5
LINC01427-204ENST00000635299 CDK11AQ9UQ88 783 aaPredicted RBP11.95□□□□□ -0.5
LINC01427-204ENST00000635299 TRIM52Q96A61 297 aa11.93□□□□□ -0.5
LINC01427-204ENST00000635299 SIN3AQ96ST3 1273 aa11.92□□□□□ -0.5
LINC01427-204ENST00000635299 LRRC9Q6ZRR7 1453 aa11.92□□□□□ -0.5
LINC01427-204ENST00000635299 CUX1P39880 1505 aa11.91□□□□□ -0.5
LINC01427-204ENST00000635299 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.91□□□□□ -0.5
LINC01427-204ENST00000635299 PKNOX2Q96KN3 472 aa11.89□□□□□ -0.51
LINC01427-204ENST00000635299 PHLDB1Q86UU1 1377 aa11.88□□□□□ -0.51
LINC01427-204ENST00000635299 SALL2Q9Y467 1007 aaPredicted RBP11.87□□□□□ -0.51
LINC01427-204ENST00000635299 FHAD1B1AJZ9 1412 aa11.87□□□□□ -0.51
LINC01427-204ENST00000635299 PLCB2Q00722 1185 aa11.87□□□□□ -0.51
LINC01427-204ENST00000635299 FAM50AQ14320 339 aaKnown RBP11.85□□□□□ -0.51
LINC01427-204ENST00000635299 PPP4R2Q9NY27 417 aa11.85□□□□□ -0.51
LINC01427-204ENST00000635299 TONSLQ96HA7 1378 aa11.84□□□□□ -0.51
LINC01427-204ENST00000635299 POTEHQ6S545 545 aa11.84□□□□□ -0.51
LINC01427-204ENST00000635299 CFAP43Q8NDM7 1665 aa11.83□□□□□ -0.52
LINC01427-204ENST00000635299 IGF1RP08069 1367 aa11.82□□□□□ -0.52
LINC01427-204ENST00000635299 HNRNPUQ00839 825 aaKnown RBP eCLIP11.82□□□□□ -0.52
LINC01427-204ENST00000635299 HMGXB3Q12766 1538 aa11.81□□□□□ -0.52
LINC01427-204ENST00000635299 HIRIP3Q9BW71 556 aaPredicted RBP11.8□□□□□ -0.52
LINC01427-204ENST00000635299 PLEKHG5O94827 1062 aa11.79□□□□□ -0.52
LINC01427-204ENST00000635299 PODXL2Q9NZ53 605 aa11.79□□□□□ -0.52
LINC01427-204ENST00000635299 CFTRP13569 1480 aa11.79□□□□□ -0.52
LINC01427-204ENST00000635299 NCAPD3P42695 1498 aa11.79□□□□□ -0.52
LINC01427-204ENST00000635299 CARMIL1Q5VZK9 1371 aa11.78□□□□□ -0.52
LINC01427-204ENST00000635299 UACAQ9BZF9 1416 aa11.78□□□□□ -0.52
LINC01427-204ENST00000635299 AQRO60306 1485 aaKnown RBP eCLIP11.77□□□□□ -0.53
LINC01427-204ENST00000635299 FYCO1Q9BQS8 1478 aa11.76□□□□□ -0.53
LINC01427-204ENST00000635299 DEKP35659 375 aaKnown RBP11.76□□□□□ -0.53
LINC01427-204ENST00000635299 HFM1A2PYH4 1435 aa11.75□□□□□ -0.53
LINC01427-204ENST00000635299 PCF11O94913 1555 aaKnown RBP11.75□□□□□ -0.53
LINC01427-204ENST00000635299 CCDC18Q5T9S5 1454 aa11.75□□□□□ -0.53
LINC01427-204ENST00000635299 CASKIN1Q8WXD9 1431 aa11.74□□□□□ -0.53
LINC01427-204ENST00000635299 HAP1P54257 671 aaPredicted RBP11.73□□□□□ -0.53
LINC01427-204ENST00000635299 IRX6P78412 446 aaPredicted RBP11.73□□□□□ -0.53
LINC01427-204ENST00000635299 FGD5Q6ZNL6 1462 aa11.73□□□□□ -0.53
LINC01427-204ENST00000635299 FGD6Q6ZV73 1430 aa11.73□□□□□ -0.53
LINC01427-204ENST00000635299 EFCAB5A4FU69 1503 aa11.72□□□□□ -0.53
LINC01427-204ENST00000635299 NCOA2Q15596 1464 aa11.72□□□□□ -0.53
LINC01427-204ENST00000635299 NOP58Q9Y2X3 529 aaKnown RBP11.72□□□□□ -0.53
LINC01427-204ENST00000635299 KDM5BQ9UGL1 1544 aa11.71□□□□□ -0.53
LINC01427-204ENST00000635299 ZBED9Q6R2W3 1325 aa11.7□□□□□ -0.54
LINC01427-204ENST00000635299 PTPN23Q9H3S7 1636 aa11.7□□□□□ -0.54
LINC01427-204ENST00000635299 CNTLNQ9NXG0 1405 aa11.7□□□□□ -0.54
LINC01427-204ENST00000635299 CCDC136Q96JN2 1154 aa11.69□□□□□ -0.54
LINC01427-204ENST00000635299 WASHC2AQ641Q2 1341 aa11.69□□□□□ -0.54
LINC01427-204ENST00000635299 HSPA5P11021 654 aaKnown RBP11.68□□□□□ -0.54
LINC01427-204ENST00000635299 NAIPQ13075 1403 aa11.67□□□□□ -0.54
LINC01427-204ENST00000635299 PRDM2Q13029 1718 aa11.67□□□□□ -0.54
LINC01427-204ENST00000635299 EIF4G2P78344 907 aaKnown RBP eCLIP11.67□□□□□ -0.54
LINC01427-204ENST00000635299 CC2D2AQ9P2K1 1620 aa11.67□□□□□ -0.54
LINC01427-204ENST00000635299 FMN1Q68DA7 1419 aa11.66□□□□□ -0.54
LINC01427-204ENST00000635299 B4GALNT3Q6L9W6 998 aa11.65□□□□□ -0.54
LINC01427-204ENST00000635299 PRKRIP1Q9H875 184 aaPredicted RBP11.65□□□□□ -0.55
LINC01427-204ENST00000635299 ATP1B4Q9UN42 357 aaPredicted RBP11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms