RNA–Protein interactions for RNA: ENST00000633956.1

SORT1-210, Transcript of sortilin 1, humanhuman

TSL 4

Gene SORT1, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-210ENST00000633956 AQRO60306 1485 aaKnown RBP eCLIP8.7□□□□□ -1.02
SORT1-210ENST00000633956 IFT140Q96RY7 1462 aa8.7□□□□□ -1.02
SORT1-210ENST00000633956 ZNF608Q9ULD9 1512 aaPredicted RBP8.69□□□□□ -1.02
SORT1-210ENST00000633956 CUL7Q14999 1698 aa8.69□□□□□ -1.02
SORT1-210ENST00000633956 PBRM1Q86U86 1689 aa8.66□□□□□ -1.02
SORT1-210ENST00000633956 PPARGC1BQ86YN6 1023 aaKnown RBP8.66□□□□□ -1.02
SORT1-210ENST00000633956 HOXD11P31277 338 aaPredicted RBP8.65□□□□□ -1.02
SORT1-210ENST00000633956 GRIN2BQ13224 1484 aa8.64□□□□□ -1.03
SORT1-210ENST00000633956 EIF4G3O43432 1585 aaKnown RBP8.64□□□□□ -1.03
SORT1-210ENST00000633956 ARAP1Q96P48 1450 aa8.64□□□□□ -1.03
SORT1-210ENST00000633956 PCGF6Q9BYE7 350 aa8.63□□□□□ -1.03
SORT1-210ENST00000633956 ADAMTS12P58397 1594 aa8.62□□□□□ -1.03
SORT1-210ENST00000633956 ARHGAP35Q9NRY4 1499 aa8.62□□□□□ -1.03
SORT1-210ENST00000633956 FHAD1B1AJZ9 1412 aa8.62□□□□□ -1.03
SORT1-210ENST00000633956 VPS8Q8N3P4 1428 aa8.62□□□□□ -1.03
SORT1-210ENST00000633956 SNAPC4Q5SXM2 1469 aa8.61□□□□□ -1.03
SORT1-210ENST00000633956 TRIM26Q12899 539 aaPredicted RBP8.6□□□□□ -1.03
SORT1-210ENST00000633956 CTTNBP2Q8WZ74 1663 aa8.59□□□□□ -1.03
SORT1-210ENST00000633956 TTBK1Q5TCY1 1321 aaPredicted RBP8.59□□□□□ -1.03
SORT1-210ENST00000633956 CNKSR2Q8WXI2 1034 aa8.59□□□□□ -1.03
SORT1-210ENST00000633956 P3H3Q8IVL6 736 aa8.58□□□□□ -1.04
SORT1-210ENST00000633956 MAGI1Q96QZ7 1491 aaPredicted RBP8.55□□□□□ -1.04
SORT1-210ENST00000633956 FHOD3Q2V2M9 1422 aa8.54□□□□□ -1.04
SORT1-210ENST00000633956 GRIN2AQ12879 1464 aa8.54□□□□□ -1.04
SORT1-210ENST00000633956 RNF216Q9NWF9 866 aaPredicted RBP8.54□□□□□ -1.04
SORT1-210ENST00000633956 EFCAB5A4FU69 1503 aa8.54□□□□□ -1.04
SORT1-210ENST00000633956 SYNJ2O15056 1496 aa8.53□□□□□ -1.04
SORT1-210ENST00000633956 DCAF8L1A6NGE4 600 aa8.53□□□□□ -1.04
SORT1-210ENST00000633956 FBLN2P98095 1184 aa8.53□□□□□ -1.04
SORT1-210ENST00000633956 APLP2Q06481 763 aa8.53□□□□□ -1.04
SORT1-210ENST00000633956 CHMP7Q8WUX9 453 aaPredicted RBP8.53□□□□□ -1.04
SORT1-210ENST00000633956 IQGAP2Q13576 1575 aa8.52□□□□□ -1.05
SORT1-210ENST00000633956 SAMD9Q5K651 1589 aa8.52□□□□□ -1.05
SORT1-210ENST00000633956 CACNB1Q02641 598 aaPredicted RBP8.5□□□□□ -1.05
SORT1-210ENST00000633956 CEP170Q5SW79 1584 aa8.5□□□□□ -1.05
SORT1-210ENST00000633956 KIAA0586Q9BVV6 1533 aa8.49□□□□□ -1.05
SORT1-210ENST00000633956 PCF11O94913 1555 aaKnown RBP8.49□□□□□ -1.05
SORT1-210ENST00000633956 KANK4Q5T7N3 995 aaPredicted RBP8.49□□□□□ -1.05
SORT1-210ENST00000633956 RNF39Q9H2S5 420 aa8.49□□□□□ -1.05
SORT1-210ENST00000633956 ATP1B4Q9UN42 357 aaPredicted RBP8.48□□□□□ -1.05
SORT1-210ENST00000633956 UGGT2Q9NYU1 1516 aa8.48□□□□□ -1.05
SORT1-210ENST00000633956 NUP160Q12769 1436 aa8.47□□□□□ -1.05
SORT1-210ENST00000633956 FMN1Q68DA7 1419 aa8.46□□□□□ -1.05
SORT1-210ENST00000633956 CASKIN1Q8WXD9 1431 aa8.46□□□□□ -1.06
SORT1-210ENST00000633956 FYCO1Q9BQS8 1478 aa8.45□□□□□ -1.06
SORT1-210ENST00000633956 TIAM1Q13009 1591 aa8.45□□□□□ -1.06
SORT1-210ENST00000633956 MAP3K1Q13233 1512 aa8.44□□□□□ -1.06
SORT1-210ENST00000633956 DISP1Q96F81 1524 aa8.44□□□□□ -1.06
SORT1-210ENST00000633956 KIAA0556O60303 1618 aa8.44□□□□□ -1.06
SORT1-210ENST00000633956 CHD1O14646 1710 aa8.44□□□□□ -1.06
SORT1-210ENST00000633956 JPH4Q96JJ6 628 aa8.43□□□□□ -1.06
SORT1-210ENST00000633956 CFAP43Q8NDM7 1665 aa8.43□□□□□ -1.06
SORT1-210ENST00000633956 LRRC9Q6ZRR7 1453 aa8.41□□□□□ -1.06
SORT1-210ENST00000633956 LRRIQ1Q96JM4 1722 aa8.4□□□□□ -1.06
SORT1-210ENST00000633956 CARMIL2Q6F5E8 1435 aa8.38□□□□□ -1.07
SORT1-210ENST00000633956 HRCP23327 699 aa8.38□□□□□ -1.07
SORT1-210ENST00000633956 HECW1Q76N89 1606 aa8.38□□□□□ -1.07
SORT1-210ENST00000633956 ARID3CA6NKF2 412 aa8.37□□□□□ -1.07
SORT1-210ENST00000633956 HNRNPUL2Q1KMD3 747 aaKnown RBP8.37□□□□□ -1.07
SORT1-210ENST00000633956 CCDC18Q5T9S5 1454 aa8.37□□□□□ -1.07
SORT1-210ENST00000633956 PRG4Q92954 1404 aaPredicted RBP8.37□□□□□ -1.07
SORT1-210ENST00000633956 RRBP1Q9P2E9 1410 aaKnown RBP8.37□□□□□ -1.07
SORT1-210ENST00000633956 PHLDB1Q86UU1 1377 aa8.36□□□□□ -1.07
SORT1-210ENST00000633956 RAPGEF6Q8TEU7 1601 aa8.36□□□□□ -1.07
SORT1-210ENST00000633956 EPRSP07814 1512 aaKnown RBP8.36□□□□□ -1.07
SORT1-210ENST00000633956 CDK13Q14004 1512 aaKnown RBP8.36□□□□□ -1.07
SORT1-210ENST00000633956 MTUS2Q5JR59 1369 aa8.35□□□□□ -1.07
SORT1-210ENST00000633956 MAGI3Q5TCQ9 1506 aa8.35□□□□□ -1.07
SORT1-210ENST00000633956 PLB1Q6P1J6 1458 aa8.35□□□□□ -1.07
SORT1-210ENST00000633956 CLASP1Q7Z460 1538 aa8.34□□□□□ -1.07
SORT1-210ENST00000633956 NUP153P49790 1475 aaKnown RBP8.34□□□□□ -1.07
SORT1-210ENST00000633956 SHROOM2Q13796 1616 aa8.34□□□□□ -1.07
SORT1-210ENST00000633956 CCNB3Q8WWL7 1395 aa8.34□□□□□ -1.07
SORT1-210ENST00000633956 EHBP1L1Q8N3D4 1523 aa8.34□□□□□ -1.08
SORT1-210ENST00000633956 ERCC6L2Q5T890 1561 aa8.33□□□□□ -1.08
SORT1-210ENST00000633956 ABCA8O94911 1581 aa8.32□□□□□ -1.08
SORT1-210ENST00000633956 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.32□□□□□ -1.08
SORT1-210ENST00000633956 NCBP3Q53F19 620 aaKnown RBP8.32□□□□□ -1.08
SORT1-210ENST00000633956 NCOA2Q15596 1464 aa8.32□□□□□ -1.08
SORT1-210ENST00000633956 PTPRGP23470 1445 aa8.31□□□□□ -1.08
SORT1-210ENST00000633956 NPM3O75607 178 aaKnown RBP8.31□□□□□ -1.08
SORT1-210ENST00000633956 C1QBPQ07021 282 aaKnown RBP8.31□□□□□ -1.08
SORT1-210ENST00000633956 SUPT6HQ7KZ85 1726 aaKnown RBP8.31□□□□□ -1.08
SORT1-210ENST00000633956 ITGAEP38570 1179 aa8.3□□□□□ -1.08
SORT1-210ENST00000633956 FAM50AQ14320 339 aaKnown RBP8.3□□□□□ -1.08
SORT1-210ENST00000633956 ARHGEF11O15085 1522 aa8.29□□□□□ -1.08
SORT1-210ENST00000633956 FGD6Q6ZV73 1430 aa8.29□□□□□ -1.08
SORT1-210ENST00000633956 CCER1Q8TC90 406 aaPredicted RBP8.28□□□□□ -1.08
SORT1-210ENST00000633956 MYOM3Q5VTT5 1437 aa8.28□□□□□ -1.08
SORT1-210ENST00000633956 ATP10BO94823 1461 aa8.27□□□□□ -1.09
SORT1-210ENST00000633956 UACAQ9BZF9 1416 aa8.27□□□□□ -1.09
SORT1-210ENST00000633956 CDK11AQ9UQ88 783 aaPredicted RBP8.26□□□□□ -1.09
SORT1-210ENST00000633956 TROQ12816 1431 aaPredicted RBP8.26□□□□□ -1.09
SORT1-210ENST00000633956 OSCARQ8IYS5 282 aa8.25□□□□□ -1.09
SORT1-210ENST00000633956 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.24□□□□□ -1.09
SORT1-210ENST00000633956 ZEB1P37275 1124 aaPredicted RBP8.24□□□□□ -1.09
SORT1-210ENST00000633956 KIF14Q15058 1648 aa8.24□□□□□ -1.09
SORT1-210ENST00000633956 PTPN23Q9H3S7 1636 aa8.24□□□□□ -1.09
SORT1-210ENST00000633956 ABCC2Q92887 1545 aa8.24□□□□□ -1.09
SORT1-210ENST00000633956 PLEKHD1A6NEE1 506 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms