RNA–Protein interactions for RNA: ENST00000633627.1

CROCCP4-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 4, humanhuman

TSL 3 BASIC

Gene CROCCP4, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP4-202ENST00000633627 RIMBP3CA6NJZ7 1639 aa32.22■■■□□ 2.75
CROCCP4-202ENST00000633627 RIMBP3BA6NNM3 1639 aa32.22■■■□□ 2.75
CROCCP4-202ENST00000633627 RIMBP3Q9UFD9 1639 aa32.22■■■□□ 2.75
CROCCP4-202ENST00000633627 SHROOM2Q13796 1616 aa32.21■■■□□ 2.75
CROCCP4-202ENST00000633627 JPH4Q96JJ6 628 aa32.17■■■□□ 2.74
CROCCP4-202ENST00000633627 KIF21BO75037 1637 aa32.11■■■□□ 2.73
CROCCP4-202ENST00000633627 IQGAP2Q13576 1575 aa32.08■■■□□ 2.73
CROCCP4-202ENST00000633627 ERCC6L2Q5T890 1561 aa32.07■■■□□ 2.72
CROCCP4-202ENST00000633627 PRG4Q92954 1404 aaPredicted RBP32.06■■■□□ 2.72
CROCCP4-202ENST00000633627 CTTNBP2Q8WZ74 1663 aa32.04■■■□□ 2.72
CROCCP4-202ENST00000633627 ARAP1Q96P48 1450 aa32.03■■■□□ 2.72
CROCCP4-202ENST00000633627 UGGT2Q9NYU1 1516 aa31.95■■■□□ 2.71
CROCCP4-202ENST00000633627 CYB5RLQ6IPT4 315 aa31.94■■■□□ 2.7
CROCCP4-202ENST00000633627 GOLGA3Q08378 1498 aa31.93■■■□□ 2.7
CROCCP4-202ENST00000633627 DISP1Q96F81 1524 aa31.88■■■□□ 2.69
CROCCP4-202ENST00000633627 CARMIL2Q6F5E8 1435 aa31.86■■■□□ 2.69
CROCCP4-202ENST00000633627 EHMT2Q96KQ7 1210 aa31.84■■■□□ 2.69
CROCCP4-202ENST00000633627 UBTFP17480 764 aaKnown RBP31.81■■■□□ 2.68
CROCCP4-202ENST00000633627 KIAA0556O60303 1618 aa31.78■■■□□ 2.68
CROCCP4-202ENST00000633627 TNIKQ9UKE5 1360 aa31.76■■■□□ 2.67
CROCCP4-202ENST00000633627 PTPRGP23470 1445 aa31.72■■■□□ 2.67
CROCCP4-202ENST00000633627 SAMD9Q5K651 1589 aa31.68■■■□□ 2.66
CROCCP4-202ENST00000633627 RANGAP1P46060 587 aaPredicted RBP31.61■■■□□ 2.65
CROCCP4-202ENST00000633627 TTBK1Q5TCY1 1321 aaPredicted RBP31.6■■■□□ 2.65
CROCCP4-202ENST00000633627 P3H3Q8IVL6 736 aa31.59■■■□□ 2.65
CROCCP4-202ENST00000633627 EFCAB5A4FU69 1503 aa31.58■■■□□ 2.65
CROCCP4-202ENST00000633627 ADCY10Q96PN6 1610 aa31.53■■■□□ 2.64
CROCCP4-202ENST00000633627 LOC105371045A0A1W2PR82 267 aa31.52■■■□□ 2.64
CROCCP4-202ENST00000633627 UACAQ9BZF9 1416 aa31.51■■■□□ 2.64
CROCCP4-202ENST00000633627 FHOD3Q2V2M9 1422 aa31.49■■■□□ 2.63
CROCCP4-202ENST00000633627 UHRF1BP1LA0JNW5 1464 aa31.49■■■□□ 2.63
CROCCP4-202ENST00000633627 ARHGAP35Q9NRY4 1499 aa31.49■■■□□ 2.63
CROCCP4-202ENST00000633627 PLB1Q6P1J6 1458 aa31.46■■■□□ 2.63
CROCCP4-202ENST00000633627 ABCC2Q92887 1545 aa31.45■■■□□ 2.63
CROCCP4-202ENST00000633627 ABCA8O94911 1581 aa31.44■■■□□ 2.62
CROCCP4-202ENST00000633627 CLIP1P30622 1438 aa31.38■■■□□ 2.61
CROCCP4-202ENST00000633627 NPM1P06748 294 aaKnown RBP eCLIP31.37■■■□□ 2.61
CROCCP4-202ENST00000633627 KDM5BQ9UGL1 1544 aa31.34■■■□□ 2.61
CROCCP4-202ENST00000633627 CEP162Q5TB80 1403 aa31.31■■■□□ 2.6
CROCCP4-202ENST00000633627 RAPGEF6Q8TEU7 1601 aa31.3■■■□□ 2.6
CROCCP4-202ENST00000633627 MAPKBP1O60336 1514 aa31.29■■■□□ 2.6
CROCCP4-202ENST00000633627 FMN1Q68DA7 1419 aa31.28■■■□□ 2.6
CROCCP4-202ENST00000633627 ZCCHC11Q5TAX3 1644 aaKnown RBP31.24■■■□□ 2.59
CROCCP4-202ENST00000633627 NUP153P49790 1475 aaKnown RBP31.21■■■□□ 2.59
CROCCP4-202ENST00000633627 ATP10BO94823 1461 aa31.2■■■□□ 2.58
CROCCP4-202ENST00000633627 ASXL2Q76L83 1435 aa31.17■■■□□ 2.58
CROCCP4-202ENST00000633627 TRHP20396 242 aaPredicted RBP31.15■■■□□ 2.58
CROCCP4-202ENST00000633627 ARID3CA6NKF2 412 aa31.13■■■□□ 2.57
CROCCP4-202ENST00000633627 ABCC10Q5T3U5 1492 aa31.11■■■□□ 2.57
CROCCP4-202ENST00000633627 CASKIN1Q8WXD9 1431 aa31.09■■■□□ 2.57
CROCCP4-202ENST00000633627 HECW1Q76N89 1606 aa31.08■■■□□ 2.57
CROCCP4-202ENST00000633627 PCF11O94913 1555 aaKnown RBP31.06■■■□□ 2.56
CROCCP4-202ENST00000633627 KIF13AQ9H1H9 1805 aa31.05■■■□□ 2.56
CROCCP4-202ENST00000633627 DIP2BQ9P265 1576 aa31.05■■■□□ 2.56
CROCCP4-202ENST00000633627 WDR7Q9Y4E6 1490 aa31.05■■■□□ 2.56
CROCCP4-202ENST00000633627 ATP1B4Q9UN42 357 aaPredicted RBP31.03■■■□□ 2.56
CROCCP4-202ENST00000633627 EPRSP07814 1512 aaKnown RBP31.03■■■□□ 2.56
CROCCP4-202ENST00000633627 FYCO1Q9BQS8 1478 aa31.01■■■□□ 2.56
CROCCP4-202ENST00000633627 FAM69CQ0P6D2 419 aa31.01■■■□□ 2.55
CROCCP4-202ENST00000633627 CDK13Q14004 1512 aaKnown RBP31■■■□□ 2.55
CROCCP4-202ENST00000633627 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31■■■□□ 2.55
CROCCP4-202ENST00000633627 HNRNPUL2Q1KMD3 747 aaKnown RBP31■■■□□ 2.55
CROCCP4-202ENST00000633627 LRRIQ1Q96JM4 1722 aa30.97■■■□□ 2.55
CROCCP4-202ENST00000633627 GLI2P10070 1586 aa30.96■■■□□ 2.55
CROCCP4-202ENST00000633627 PLEKHD1A6NEE1 506 aa30.92■■■□□ 2.54
CROCCP4-202ENST00000633627 VPS8Q8N3P4 1428 aa30.91■■■□□ 2.54
CROCCP4-202ENST00000633627 KCNH8Q96L42 1107 aa30.91■■■□□ 2.54
CROCCP4-202ENST00000633627 CCDC18Q5T9S5 1454 aa30.9■■■□□ 2.54
CROCCP4-202ENST00000633627 CDK11AQ9UQ88 783 aaPredicted RBP30.85■■■□□ 2.53
CROCCP4-202ENST00000633627 MAP3K4Q9Y6R4 1608 aa30.81■■■□□ 2.52
CROCCP4-202ENST00000633627 TROQ12816 1431 aaPredicted RBP30.78■■■□□ 2.52
CROCCP4-202ENST00000633627 ABCA9Q8IUA7 1624 aa30.77■■■□□ 2.52
CROCCP4-202ENST00000633627 CFAP43Q8NDM7 1665 aa30.77■■■□□ 2.52
CROCCP4-202ENST00000633627 TSPOAP1O95153 1857 aa30.76■■■□□ 2.51
CROCCP4-202ENST00000633627 MAGI3Q5TCQ9 1506 aa30.75■■■□□ 2.51
CROCCP4-202ENST00000633627 PPRC1Q5VV67 1664 aaKnown RBP30.74■■■□□ 2.51
CROCCP4-202ENST00000633627 CD109Q6YHK3 1445 aa30.73■■■□□ 2.51
CROCCP4-202ENST00000633627 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.7■■■□□ 2.511e-10■■■■■ 99.8
CROCCP4-202ENST00000633627 KIF14Q15058 1648 aa30.66■■■□□ 2.5
CROCCP4-202ENST00000633627 TIAM1Q13009 1591 aa30.65■■■□□ 2.5
CROCCP4-202ENST00000633627 TTC37Q6PGP7 1564 aa30.65■■■□□ 2.5
CROCCP4-202ENST00000633627 MAP3K1Q13233 1512 aa30.63■■■□□ 2.49
CROCCP4-202ENST00000633627 TEX14Q8IWB6 1497 aa30.63■■■□□ 2.49
CROCCP4-202ENST00000633627 MTUS2Q5JR59 1369 aa30.61■■■□□ 2.49
CROCCP4-202ENST00000633627 EHBP1L1Q8N3D4 1523 aa30.57■■■□□ 2.48
CROCCP4-202ENST00000633627 PLCH2O75038 1416 aa30.54■■■□□ 2.48
CROCCP4-202ENST00000633627 LRRC9Q6ZRR7 1453 aa30.52■■■□□ 2.48
CROCCP4-202ENST00000633627 KANK4Q5T7N3 995 aaPredicted RBP30.5■■■□□ 2.47
CROCCP4-202ENST00000633627 MYO5CQ9NQX4 1742 aa30.5■■■□□ 2.47
CROCCP4-202ENST00000633627 ARAP3Q8WWN8 1544 aa30.49■■■□□ 2.47
CROCCP4-202ENST00000633627 APLP2Q06481 763 aa30.49■■■□□ 2.47
CROCCP4-202ENST00000633627 NEO1Q92859 1461 aa30.49■■■□□ 2.47
CROCCP4-202ENST00000633627 COL17A1Q9UMD9 1497 aaPredicted RBP30.47■■■□□ 2.47
CROCCP4-202ENST00000633627 PHLDB1Q86UU1 1377 aa30.47■■■□□ 2.47
CROCCP4-202ENST00000633627 FANCAO15360 1455 aa30.45■■■□□ 2.47
CROCCP4-202ENST00000633627 KDM6BO15054 1643 aa30.45■■■□□ 2.47
CROCCP4-202ENST00000633627 CDC42BPAQ5VT25 1732 aa30.42■■■□□ 2.46
CROCCP4-202ENST00000633627 GPATCH8Q9UKJ3 1502 aaKnown RBP30.42■■■□□ 2.46
CROCCP4-202ENST00000633627 SUPT6HQ7KZ85 1726 aaKnown RBP30.42■■■□□ 2.46
CROCCP4-202ENST00000633627 CDC42BPBQ9Y5S2 1711 aa30.42■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms