RNA–Protein interactions for RNA: ENST00000631210.1

MECP2-220, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best)

Gene MECP2, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-220ENST00000631210 LOC105371045A0A1W2PR82 267 aa13.71□□□□□ -0.21
MECP2-220ENST00000631210 CTTNBP2Q8WZ74 1663 aa13.7□□□□□ -0.22
MECP2-220ENST00000631210 EHMT2Q96KQ7 1210 aa13.69□□□□□ -0.22
MECP2-220ENST00000631210 SHROOM2Q13796 1616 aa13.68□□□□□ -0.22
MECP2-220ENST00000631210 IQGAP2Q13576 1575 aa13.66□□□□□ -0.22
MECP2-220ENST00000631210 TNIKQ9UKE5 1360 aa13.65□□□□□ -0.22
MECP2-220ENST00000631210 UGGT2Q9NYU1 1516 aa13.64□□□□□ -0.23
MECP2-220ENST00000631210 ERCC6L2Q5T890 1561 aa13.62□□□□□ -0.23
MECP2-220ENST00000631210 UBTFP17480 764 aaKnown RBP13.62□□□□□ -0.23
MECP2-220ENST00000631210 JPH4Q96JJ6 628 aa13.62□□□□□ -0.23
MECP2-220ENST00000631210 DISP1Q96F81 1524 aa13.6□□□□□ -0.23
MECP2-220ENST00000631210 SAMD9Q5K651 1589 aa13.58□□□□□ -0.23
MECP2-220ENST00000631210 PRG4Q92954 1404 aaPredicted RBP13.57□□□□□ -0.24
MECP2-220ENST00000631210 ARHGAP35Q9NRY4 1499 aa13.55□□□□□ -0.24
MECP2-220ENST00000631210 ARHGEF11O15085 1522 aa13.55□□□□□ -0.24
MECP2-220ENST00000631210 KIAA0556O60303 1618 aa13.55□□□□□ -0.24
MECP2-220ENST00000631210 DNAJC5Q9H3Z4 198 aa13.54□□□□□ -0.24
MECP2-220ENST00000631210 CEP162Q5TB80 1403 aa13.53□□□□□ -0.24
MECP2-220ENST00000631210 RIMBP3CA6NJZ7 1639 aa13.53□□□□□ -0.24
MECP2-220ENST00000631210 RIMBP3BA6NNM3 1639 aa13.53□□□□□ -0.24
MECP2-220ENST00000631210 RIMBP3Q9UFD9 1639 aa13.53□□□□□ -0.24
MECP2-220ENST00000631210 EFCAB5A4FU69 1503 aa13.51□□□□□ -0.25
MECP2-220ENST00000631210 ARAP1Q96P48 1450 aa13.5□□□□□ -0.25
MECP2-220ENST00000631210 CLIP1P30622 1438 aa13.5□□□□□ -0.25
MECP2-220ENST00000631210 RANGAP1P46060 587 aaPredicted RBP13.49□□□□□ -0.25
MECP2-220ENST00000631210 FHOD3Q2V2M9 1422 aa13.48□□□□□ -0.25
MECP2-220ENST00000631210 CARMIL2Q6F5E8 1435 aa13.48□□□□□ -0.25
MECP2-220ENST00000631210 P3H3Q8IVL6 736 aa13.48□□□□□ -0.25
MECP2-220ENST00000631210 PTPRGP23470 1445 aa13.43□□□□□ -0.26
MECP2-220ENST00000631210 ABCA8O94911 1581 aa13.41□□□□□ -0.26
MECP2-220ENST00000631210 PLB1Q6P1J6 1458 aa13.41□□□□□ -0.26
MECP2-220ENST00000631210 ADCY10Q96PN6 1610 aa13.38□□□□□ -0.27
MECP2-220ENST00000631210 UHRF1BP1LA0JNW5 1464 aa13.37□□□□□ -0.27
MECP2-220ENST00000631210 UACAQ9BZF9 1416 aa13.37□□□□□ -0.27
MECP2-220ENST00000631210 TTBK1Q5TCY1 1321 aaPredicted RBP13.37□□□□□ -0.27
MECP2-220ENST00000631210 CYB5RLQ6IPT4 315 aa13.36□□□□□ -0.27
MECP2-220ENST00000631210 FMN1Q68DA7 1419 aa13.36□□□□□ -0.27
MECP2-220ENST00000631210 PCF11O94913 1555 aaKnown RBP13.36□□□□□ -0.27
MECP2-220ENST00000631210 RAPGEF6Q8TEU7 1601 aa13.35□□□□□ -0.27
MECP2-220ENST00000631210 ABCC2Q92887 1545 aa13.35□□□□□ -0.27
MECP2-220ENST00000631210 NUP153P49790 1475 aaKnown RBP13.35□□□□□ -0.27
MECP2-220ENST00000631210 LRRIQ1Q96JM4 1722 aa13.34□□□□□ -0.27
MECP2-220ENST00000631210 VPS8Q8N3P4 1428 aa13.34□□□□□ -0.27
MECP2-220ENST00000631210 CASKIN1Q8WXD9 1431 aa13.34□□□□□ -0.27
MECP2-220ENST00000631210 KDM5BQ9UGL1 1544 aa13.31□□□□□ -0.28
MECP2-220ENST00000631210 ATP10BO94823 1461 aa13.3□□□□□ -0.28
MECP2-220ENST00000631210 FYCO1Q9BQS8 1478 aa13.3□□□□□ -0.28
MECP2-220ENST00000631210 EPRSP07814 1512 aaKnown RBP13.28□□□□□ -0.28
MECP2-220ENST00000631210 ZCCHC11Q5TAX3 1644 aaKnown RBP13.28□□□□□ -0.28
MECP2-220ENST00000631210 HECW1Q76N89 1606 aa13.28□□□□□ -0.28
MECP2-220ENST00000631210 CDK13Q14004 1512 aaKnown RBP13.27□□□□□ -0.29
MECP2-220ENST00000631210 ARID3CA6NKF2 412 aa13.24□□□□□ -0.29
MECP2-220ENST00000631210 MAGI3Q5TCQ9 1506 aa13.23□□□□□ -0.29
MECP2-220ENST00000631210 CFAP43Q8NDM7 1665 aa13.21□□□□□ -0.29
MECP2-220ENST00000631210 MAPKBP1O60336 1514 aa13.21□□□□□ -0.29
MECP2-220ENST00000631210 MAP3K1Q13233 1512 aa13.21□□□□□ -0.29
MECP2-220ENST00000631210 CCDC18Q5T9S5 1454 aa13.21□□□□□ -0.3
MECP2-220ENST00000631210 TIAM1Q13009 1591 aa13.2□□□□□ -0.3
MECP2-220ENST00000631210 ATP1B4Q9UN42 357 aaPredicted RBP13.19□□□□□ -0.3
MECP2-220ENST00000631210 ASXL2Q76L83 1435 aa13.19□□□□□ -0.3
MECP2-220ENST00000631210 KANK4Q5T7N3 995 aaPredicted RBP13.17□□□□□ -0.3
MECP2-220ENST00000631210 WDR7Q9Y4E6 1490 aa13.16□□□□□ -0.3
MECP2-220ENST00000631210 TROQ12816 1431 aaPredicted RBP13.14□□□□□ -0.31
MECP2-220ENST00000631210 LRRC9Q6ZRR7 1453 aa13.14□□□□□ -0.31
MECP2-220ENST00000631210 NPM1P06748 294 aaKnown RBP eCLIP13.13□□□□□ -0.31
MECP2-220ENST00000631210 KIF14Q15058 1648 aa13.13□□□□□ -0.31
MECP2-220ENST00000631210 DIP2BQ9P265 1576 aa13.11□□□□□ -0.31
MECP2-220ENST00000631210 ABCC10Q5T3U5 1492 aa13.11□□□□□ -0.31
MECP2-220ENST00000631210 PLEKHD1A6NEE1 506 aa13.11□□□□□ -0.31
MECP2-220ENST00000631210 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.11□□□□□ -0.31
MECP2-220ENST00000631210 HNRNPUL2Q1KMD3 747 aaKnown RBP13.11□□□□□ -0.31
MECP2-220ENST00000631210 EHBP1L1Q8N3D4 1523 aa13.11□□□□□ -0.31
MECP2-220ENST00000631210 KIF13AQ9H1H9 1805 aa13.1□□□□□ -0.31
MECP2-220ENST00000631210 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.09□□□□□ -0.31
MECP2-220ENST00000631210 GLI2P10070 1586 aa13.09□□□□□ -0.31
MECP2-220ENST00000631210 TTC37Q6PGP7 1564 aa13.08□□□□□ -0.32
MECP2-220ENST00000631210 CDK11AQ9UQ88 783 aaPredicted RBP13.08□□□□□ -0.32
MECP2-220ENST00000631210 ABCA9Q8IUA7 1624 aa13.08□□□□□ -0.32
MECP2-220ENST00000631210 MTUS2Q5JR59 1369 aa13.07□□□□□ -0.32
MECP2-220ENST00000631210 KCNH8Q96L42 1107 aa13.07□□□□□ -0.32
MECP2-220ENST00000631210 MAP3K4Q9Y6R4 1608 aa13.06□□□□□ -0.32
MECP2-220ENST00000631210 NCOA2Q15596 1464 aa13.05□□□□□ -0.32
MECP2-220ENST00000631210 PPARGC1BQ86YN6 1023 aaKnown RBP13.05□□□□□ -0.32
MECP2-220ENST00000631210 APLP2Q06481 763 aa13.04□□□□□ -0.32
MECP2-220ENST00000631210 SUPT6HQ7KZ85 1726 aaKnown RBP13.04□□□□□ -0.32
MECP2-220ENST00000631210 PPRC1Q5VV67 1664 aaKnown RBP13.03□□□□□ -0.32
MECP2-220ENST00000631210 GPATCH8Q9UKJ3 1502 aaKnown RBP13.03□□□□□ -0.32
MECP2-220ENST00000631210 CDC42BPAQ5VT25 1732 aa13.02□□□□□ -0.32
MECP2-220ENST00000631210 FAM69CQ0P6D2 419 aa13.02□□□□□ -0.33
MECP2-220ENST00000631210 PHLDB1Q86UU1 1377 aa13.02□□□□□ -0.33
MECP2-220ENST00000631210 CDC42BPBQ9Y5S2 1711 aa13.01□□□□□ -0.33
MECP2-220ENST00000631210 PLCH2O75038 1416 aa13□□□□□ -0.33
MECP2-220ENST00000631210 PREX2Q70Z35 1606 aa12.99□□□□□ -0.33
MECP2-220ENST00000631210 CD109Q6YHK3 1445 aa12.99□□□□□ -0.33
MECP2-220ENST00000631210 ARAP3Q8WWN8 1544 aa12.98□□□□□ -0.33
MECP2-220ENST00000631210 MYO5CQ9NQX4 1742 aa12.98□□□□□ -0.33
MECP2-220ENST00000631210 MYOM3Q5VTT5 1437 aa12.96□□□□□ -0.33
MECP2-220ENST00000631210 TSPOAP1O95153 1857 aa12.95□□□□□ -0.34
MECP2-220ENST00000631210 CCNB3Q8WWL7 1395 aa12.95□□□□□ -0.34
MECP2-220ENST00000631210 ITSN2Q9NZM3 1697 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms