RNA–Protein interactions for RNA: ENST00000628566.2

NR1I3-235, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 5 BASIC

Gene NR1I3, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-235ENST00000628566 KIAA0586Q9BVV6 1533 aa12.94□□□□□ -0.34
NR1I3-235ENST00000628566 CSRNP3Q8WYN3 585 aa12.94□□□□□ -0.34
NR1I3-235ENST00000628566 JPH4Q96JJ6 628 aa12.92□□□□□ -0.34
NR1I3-235ENST00000628566 SHROOM2Q13796 1616 aa12.91□□□□□ -0.34
NR1I3-235ENST00000628566 CYB5RLQ6IPT4 315 aa12.9□□□□□ -0.34
NR1I3-235ENST00000628566 PRXQ9BXM0 1461 aa12.9□□□□□ -0.34
NR1I3-235ENST00000628566 PRG4Q92954 1404 aaPredicted RBP12.88□□□□□ -0.35
NR1I3-235ENST00000628566 FAM9AQ8IZU1 332 aaPredicted RBP12.88□□□□□ -0.35
NR1I3-235ENST00000628566 IQGAP2Q13576 1575 aa12.88□□□□□ -0.35
NR1I3-235ENST00000628566 ARAP1Q96P48 1450 aa12.87□□□□□ -0.35
NR1I3-235ENST00000628566 CARMIL2Q6F5E8 1435 aa12.87□□□□□ -0.35
NR1I3-235ENST00000628566 SENP3Q9H4L4 574 aaPredicted RBP12.85□□□□□ -0.35
NR1I3-235ENST00000628566 CTTNBP2Q8WZ74 1663 aa12.84□□□□□ -0.35
NR1I3-235ENST00000628566 KIF21BO75037 1637 aa12.81□□□□□ -0.36
NR1I3-235ENST00000628566 GOLGA3Q08378 1498 aa12.8□□□□□ -0.36
NR1I3-235ENST00000628566 ERCC6L2Q5T890 1561 aa12.8□□□□□ -0.36
NR1I3-235ENST00000628566 UGGT2Q9NYU1 1516 aa12.79□□□□□ -0.36
NR1I3-235ENST00000628566 TNIKQ9UKE5 1360 aa12.78□□□□□ -0.36
NR1I3-235ENST00000628566 UBTFP17480 764 aaKnown RBP12.76□□□□□ -0.37
NR1I3-235ENST00000628566 PTPRGP23470 1445 aa12.76□□□□□ -0.37
NR1I3-235ENST00000628566 NPM1P06748 294 aaKnown RBP eCLIP12.75□□□□□ -0.37
NR1I3-235ENST00000628566 KIAA0556O60303 1618 aa12.73□□□□□ -0.37
NR1I3-235ENST00000628566 DISP1Q96F81 1524 aa12.72□□□□□ -0.37
NR1I3-235ENST00000628566 TTBK1Q5TCY1 1321 aaPredicted RBP12.72□□□□□ -0.37
NR1I3-235ENST00000628566 EHMT2Q96KQ7 1210 aa12.69□□□□□ -0.38
NR1I3-235ENST00000628566 TRHP20396 242 aaPredicted RBP12.67□□□□□ -0.38
NR1I3-235ENST00000628566 RANGAP1P46060 587 aaPredicted RBP12.67□□□□□ -0.38
NR1I3-235ENST00000628566 UACAQ9BZF9 1416 aa12.67□□□□□ -0.38
NR1I3-235ENST00000628566 EFCAB5A4FU69 1503 aa12.67□□□□□ -0.38
NR1I3-235ENST00000628566 SAMD9Q5K651 1589 aa12.65□□□□□ -0.38
NR1I3-235ENST00000628566 ADCY10Q96PN6 1610 aa12.65□□□□□ -0.38
NR1I3-235ENST00000628566 UHRF1BP1LA0JNW5 1464 aa12.65□□□□□ -0.38
NR1I3-235ENST00000628566 P3H3Q8IVL6 736 aa12.64□□□□□ -0.39
NR1I3-235ENST00000628566 ABCC2Q92887 1545 aa12.63□□□□□ -0.39
NR1I3-235ENST00000628566 PHF23Q9BUL5 403 aaPredicted RBP12.62□□□□□ -0.39
NR1I3-235ENST00000628566 MAPKBP1O60336 1514 aa12.61□□□□□ -0.39
NR1I3-235ENST00000628566 FHOD3Q2V2M9 1422 aa12.58□□□□□ -0.4
NR1I3-235ENST00000628566 PLB1Q6P1J6 1458 aa12.58□□□□□ -0.4
NR1I3-235ENST00000628566 ABCA8O94911 1581 aa12.57□□□□□ -0.4
NR1I3-235ENST00000628566 FMN1Q68DA7 1419 aa12.57□□□□□ -0.4
NR1I3-235ENST00000628566 KDM5BQ9UGL1 1544 aa12.57□□□□□ -0.4
NR1I3-235ENST00000628566 RAPGEF6Q8TEU7 1601 aa12.55□□□□□ -0.4
NR1I3-235ENST00000628566 ZCCHC11Q5TAX3 1644 aaKnown RBP12.54□□□□□ -0.4
NR1I3-235ENST00000628566 ARHGAP35Q9NRY4 1499 aa12.53□□□□□ -0.4
NR1I3-235ENST00000628566 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.53□□□□□ -0.4
NR1I3-235ENST00000628566 HNRNPUL2Q1KMD3 747 aaKnown RBP12.53□□□□□ -0.4
NR1I3-235ENST00000628566 CLIP1P30622 1438 aa12.53□□□□□ -0.4
NR1I3-235ENST00000628566 ASXL2Q76L83 1435 aa12.53□□□□□ -0.4
NR1I3-235ENST00000628566 ABCC10Q5T3U5 1492 aa12.53□□□□□ -0.4
NR1I3-235ENST00000628566 FAM69CQ0P6D2 419 aa12.52□□□□□ -0.41
NR1I3-235ENST00000628566 DIP2BQ9P265 1576 aa12.49□□□□□ -0.41
NR1I3-235ENST00000628566 WDR7Q9Y4E6 1490 aa12.49□□□□□ -0.41
NR1I3-235ENST00000628566 ATP1B4Q9UN42 357 aaPredicted RBP12.49□□□□□ -0.41
NR1I3-235ENST00000628566 HECW1Q76N89 1606 aa12.48□□□□□ -0.41
NR1I3-235ENST00000628566 ARID3CA6NKF2 412 aa12.47□□□□□ -0.41
NR1I3-235ENST00000628566 CDK11AQ9UQ88 783 aaPredicted RBP12.47□□□□□ -0.41
NR1I3-235ENST00000628566 ATP10BO94823 1461 aa12.46□□□□□ -0.41
NR1I3-235ENST00000628566 NUP153P49790 1475 aaKnown RBP12.46□□□□□ -0.41
NR1I3-235ENST00000628566 CEP162Q5TB80 1403 aa12.46□□□□□ -0.41
NR1I3-235ENST00000628566 KIF13AQ9H1H9 1805 aa12.46□□□□□ -0.41
NR1I3-235ENST00000628566 PLEKHD1A6NEE1 506 aa12.46□□□□□ -0.41
NR1I3-235ENST00000628566 GLI2P10070 1586 aa12.46□□□□□ -0.42
NR1I3-235ENST00000628566 EPRSP07814 1512 aaKnown RBP12.45□□□□□ -0.42
NR1I3-235ENST00000628566 LOC105371045A0A1W2PR82 267 aa12.44□□□□□ -0.42
NR1I3-235ENST00000628566 KCNH8Q96L42 1107 aa12.43□□□□□ -0.42
NR1I3-235ENST00000628566 CASKIN1Q8WXD9 1431 aa12.43□□□□□ -0.42
NR1I3-235ENST00000628566 CCDC18Q5T9S5 1454 aa12.42□□□□□ -0.42
NR1I3-235ENST00000628566 FYCO1Q9BQS8 1478 aa12.42□□□□□ -0.42
NR1I3-235ENST00000628566 TEX14Q8IWB6 1497 aa12.41□□□□□ -0.42
NR1I3-235ENST00000628566 CFAP43Q8NDM7 1665 aa12.39□□□□□ -0.43
NR1I3-235ENST00000628566 PCF11O94913 1555 aaKnown RBP12.39□□□□□ -0.43
NR1I3-235ENST00000628566 CD109Q6YHK3 1445 aa12.38□□□□□ -0.43
NR1I3-235ENST00000628566 CDK13Q14004 1512 aaKnown RBP12.38□□□□□ -0.43
NR1I3-235ENST00000628566 MAP3K4Q9Y6R4 1608 aa12.38□□□□□ -0.43
NR1I3-235ENST00000628566 TSPOAP1O95153 1857 aa12.38□□□□□ -0.43
NR1I3-235ENST00000628566 ABCA9Q8IUA7 1624 aa12.34□□□□□ -0.43
NR1I3-235ENST00000628566 MAGI3Q5TCQ9 1506 aa12.34□□□□□ -0.43
NR1I3-235ENST00000628566 TROQ12816 1431 aaPredicted RBP12.33□□□□□ -0.44
NR1I3-235ENST00000628566 VPS8Q8N3P4 1428 aa12.33□□□□□ -0.44
NR1I3-235ENST00000628566 KDM6BO15054 1643 aa12.33□□□□□ -0.44
NR1I3-235ENST00000628566 KIF14Q15058 1648 aa12.33□□□□□ -0.44
NR1I3-235ENST00000628566 PHLDB1Q86UU1 1377 aa12.31□□□□□ -0.44
NR1I3-235ENST00000628566 APLP2Q06481 763 aa12.31□□□□□ -0.44
NR1I3-235ENST00000628566 MTUS2Q5JR59 1369 aa12.3□□□□□ -0.44
NR1I3-235ENST00000628566 LRRIQ1Q96JM4 1722 aa12.3□□□□□ -0.44
NR1I3-235ENST00000628566 CFAP74Q9C0B2 1584 aa12.3□□□□□ -0.44
NR1I3-235ENST00000628566 PPRC1Q5VV67 1664 aaKnown RBP12.29□□□□□ -0.44
NR1I3-235ENST00000628566 NEO1Q92859 1461 aa12.28□□□□□ -0.44
NR1I3-235ENST00000628566 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.28□□□□□ -0.44
NR1I3-235ENST00000628566 TTC37Q6PGP7 1564 aa12.26□□□□□ -0.45
NR1I3-235ENST00000628566 MYO5CQ9NQX4 1742 aa12.25□□□□□ -0.45
NR1I3-235ENST00000628566 EFCAB2Q5VUJ9 269 aa12.25□□□□□ -0.45
NR1I3-235ENST00000628566 FANCAO15360 1455 aa12.25□□□□□ -0.45
NR1I3-235ENST00000628566 EHBP1L1Q8N3D4 1523 aa12.25□□□□□ -0.45
NR1I3-235ENST00000628566 PLCH2O75038 1416 aa12.24□□□□□ -0.45
NR1I3-235ENST00000628566 ARAP3Q8WWN8 1544 aa12.24□□□□□ -0.45
NR1I3-235ENST00000628566 MAP3K1Q13233 1512 aa12.23□□□□□ -0.45
NR1I3-235ENST00000628566 TIAM1Q13009 1591 aa12.22□□□□□ -0.45
NR1I3-235ENST00000628566 ARHGAP5Q13017 1502 aa12.22□□□□□ -0.45
NR1I3-235ENST00000628566 AKNAQ7Z591 1439 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms