RNA–Protein interactions for RNA: ENST00000627144.2

SMIM7-221, Transcript of small integral membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene SMIM7, Length 2,171 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM7-221ENST00000627144 GAPVD1Q14C86 1478 aa15.54■□□□□ 0.08
SMIM7-221ENST00000627144 CUL7Q14999 1698 aa15.54■□□□□ 0.08
SMIM7-221ENST00000627144 CARMIL1Q5VZK9 1371 aa15.54■□□□□ 0.08
SMIM7-221ENST00000627144 ABCA5Q8WWZ7 1642 aa15.51■□□□□ 0.07
SMIM7-221ENST00000627144 ARHGAP35Q9NRY4 1499 aa15.5■□□□□ 0.07
SMIM7-221ENST00000627144 HNRNPUL2Q1KMD3 747 aaKnown RBP15.46■□□□□ 0.07
SMIM7-221ENST00000627144 EIF4G3O43432 1585 aaKnown RBP15.43■□□□□ 0.06
SMIM7-221ENST00000627144 GRIN2BQ13224 1484 aa15.43■□□□□ 0.06
SMIM7-221ENST00000627144 CTTNBP2Q8WZ74 1663 aa15.42■□□□□ 0.06
SMIM7-221ENST00000627144 PBRM1Q86U86 1689 aa15.41■□□□□ 0.06
SMIM7-221ENST00000627144 KANK4Q5T7N3 995 aaPredicted RBP15.4■□□□□ 0.06
SMIM7-221ENST00000627144 RRBP1Q9P2E9 1410 aaKnown RBP15.4■□□□□ 0.06
SMIM7-221ENST00000627144 MAP3K1Q13233 1512 aa15.38■□□□□ 0.05
SMIM7-221ENST00000627144 SNAPC4Q5SXM2 1469 aa15.36■□□□□ 0.05
SMIM7-221ENST00000627144 FHAD1B1AJZ9 1412 aa15.35■□□□□ 0.05
SMIM7-221ENST00000627144 TIAM1Q13009 1591 aa15.34■□□□□ 0.05
SMIM7-221ENST00000627144 FBLN2P98095 1184 aa15.33■□□□□ 0.04
SMIM7-221ENST00000627144 DIEXFQ68CQ4 756 aaKnown RBP15.33■□□□□ 0.04
SMIM7-221ENST00000627144 ADAMTS12P58397 1594 aa15.32■□□□□ 0.04
SMIM7-221ENST00000627144 CHMP7Q8WUX9 453 aaPredicted RBP15.31■□□□□ 0.04
SMIM7-221ENST00000627144 EFCAB5A4FU69 1503 aa15.31■□□□□ 0.04
SMIM7-221ENST00000627144 CLSPNQ9HAW4 1339 aa15.31■□□□□ 0.04
SMIM7-221ENST00000627144 CCNB3Q8WWL7 1395 aa15.3■□□□□ 0.04
SMIM7-221ENST00000627144 MAGI1Q96QZ7 1491 aaPredicted RBP15.3■□□□□ 0.04
SMIM7-221ENST00000627144 ZNF316A6NFI3 1004 aaPredicted RBP15.29■□□□□ 0.04
SMIM7-221ENST00000627144 CFAP43Q8NDM7 1665 aa15.27■□□□□ 0.03
SMIM7-221ENST00000627144 SYNJ2O15056 1496 aa15.26■□□□□ 0.03
SMIM7-221ENST00000627144 DHX57Q6P158 1386 aaKnown RBP15.26■□□□□ 0.03
SMIM7-221ENST00000627144 LRRC9Q6ZRR7 1453 aa15.26■□□□□ 0.03
SMIM7-221ENST00000627144 PCF11O94913 1555 aaKnown RBP15.25■□□□□ 0.03
SMIM7-221ENST00000627144 GRIN2AQ12879 1464 aa15.25■□□□□ 0.03
SMIM7-221ENST00000627144 FYCO1Q9BQS8 1478 aa15.22■□□□□ 0.03
SMIM7-221ENST00000627144 SAMD9Q5K651 1589 aa15.2■□□□□ 0.02
SMIM7-221ENST00000627144 FHOD3Q2V2M9 1422 aa15.19■□□□□ 0.02
SMIM7-221ENST00000627144 CASKIN1Q8WXD9 1431 aa15.19■□□□□ 0.02
SMIM7-221ENST00000627144 P3H3Q8IVL6 736 aa15.19■□□□□ 0.02
SMIM7-221ENST00000627144 FMN1Q68DA7 1419 aa15.17■□□□□ 0.02
SMIM7-221ENST00000627144 IQGAP2Q13576 1575 aa15.17■□□□□ 0.02
SMIM7-221ENST00000627144 PHLDB1Q86UU1 1377 aa15.16■□□□□ 0.02
SMIM7-221ENST00000627144 CEP170Q5SW79 1584 aa15.16■□□□□ 0.02
SMIM7-221ENST00000627144 KIAA0586Q9BVV6 1533 aa15.14■□□□□ 0.01
SMIM7-221ENST00000627144 CHD1O14646 1710 aa15.14■□□□□ 0.01
SMIM7-221ENST00000627144 NUP160Q12769 1436 aa15.14■□□□□ 0.01
SMIM7-221ENST00000627144 SCAF1Q9H7N4 1312 aaKnown RBP15.12■□□□□ 0.01
SMIM7-221ENST00000627144 JPH4Q96JJ6 628 aa15.11■□□□□ 0.01
SMIM7-221ENST00000627144 RAB3GAP2Q9H2M9 1393 aa15.11■□□□□ 0.01
SMIM7-221ENST00000627144 ACIN1Q9UKV3 1341 aaKnown RBP15.09■□□□□ 0.01
SMIM7-221ENST00000627144 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.09■□□□□ 0.01
SMIM7-221ENST00000627144 ITGAEP38570 1179 aa15.09■□□□□ 0.01
SMIM7-221ENST00000627144 SETD5Q9C0A6 1442 aa15.08■□□□□ 0.01
SMIM7-221ENST00000627144 UGGT2Q9NYU1 1516 aa15.08■□□□□ 0
SMIM7-221ENST00000627144 CENPBP07199 599 aaPredicted RBP15.07■□□□□ 0
SMIM7-221ENST00000627144 ATP1B4Q9UN42 357 aaPredicted RBP15.07■□□□□ 0
SMIM7-221ENST00000627144 MAPKBP1O60336 1514 aa15.05■□□□□ -0
SMIM7-221ENST00000627144 NEUROD1Q13562 356 aa15.04■□□□□ -0
SMIM7-221ENST00000627144 FAM50AQ14320 339 aaKnown RBP15.03■□□□□ -0
SMIM7-221ENST00000627144 DISP1Q96F81 1524 aa15.03■□□□□ -0
SMIM7-221ENST00000627144 LRRIQ1Q96JM4 1722 aa15.03■□□□□ -0
SMIM7-221ENST00000627144 OSCARQ8IYS5 282 aa15.01□□□□□ -0.01
SMIM7-221ENST00000627144 FGD6Q6ZV73 1430 aa15.01□□□□□ -0.01
SMIM7-221ENST00000627144 KIAA0556O60303 1618 aa15□□□□□ -0.01
SMIM7-221ENST00000627144 HECW1Q76N89 1606 aa15□□□□□ -0.01
SMIM7-221ENST00000627144 MTUS2Q5JR59 1369 aa15□□□□□ -0.01
SMIM7-221ENST00000627144 MIER1Q8N108 512 aa14.99□□□□□ -0.01
SMIM7-221ENST00000627144 CCDC18Q5T9S5 1454 aa14.99□□□□□ -0.01
SMIM7-221ENST00000627144 EHBP1L1Q8N3D4 1523 aa14.98□□□□□ -0.01
SMIM7-221ENST00000627144 PRG4Q92954 1404 aaPredicted RBP14.97□□□□□ -0.01
SMIM7-221ENST00000627144 CLASP1Q7Z460 1538 aa14.96□□□□□ -0.01
SMIM7-221ENST00000627144 SUPT6HQ7KZ85 1726 aaKnown RBP14.96□□□□□ -0.01
SMIM7-221ENST00000627144 NCOA2Q15596 1464 aa14.95□□□□□ -0.02
SMIM7-221ENST00000627144 CARMIL2Q6F5E8 1435 aa14.95□□□□□ -0.02
SMIM7-221ENST00000627144 MYOM3Q5VTT5 1437 aa14.94□□□□□ -0.02
SMIM7-221ENST00000627144 ARHGEF11O15085 1522 aa14.93□□□□□ -0.02
SMIM7-221ENST00000627144 SHROOM2Q13796 1616 aa14.93□□□□□ -0.02
SMIM7-221ENST00000627144 ERCC6L2Q5T890 1561 aa14.92□□□□□ -0.02
SMIM7-221ENST00000627144 EPRSP07814 1512 aaKnown RBP14.9□□□□□ -0.02
SMIM7-221ENST00000627144 RAPGEF6Q8TEU7 1601 aa14.9□□□□□ -0.02
SMIM7-221ENST00000627144 HFM1A2PYH4 1435 aa14.9□□□□□ -0.02
SMIM7-221ENST00000627144 MAGI3Q5TCQ9 1506 aa14.89□□□□□ -0.03
SMIM7-221ENST00000627144 ARID3CA6NKF2 412 aa14.88□□□□□ -0.03
SMIM7-221ENST00000627144 TIMELESSQ9UNS1 1208 aa14.88□□□□□ -0.03
SMIM7-221ENST00000627144 PTPRKQ15262 1439 aa14.87□□□□□ -0.03
SMIM7-221ENST00000627144 PTPN23Q9H3S7 1636 aa14.87□□□□□ -0.03
SMIM7-221ENST00000627144 GTF3C3Q9Y5Q9 886 aa14.87□□□□□ -0.03
SMIM7-221ENST00000627144 PTPRGP23470 1445 aa14.86□□□□□ -0.03
SMIM7-221ENST00000627144 PLB1Q6P1J6 1458 aa14.86□□□□□ -0.03
SMIM7-221ENST00000627144 TCOF1Q13428 1488 aaKnown RBP14.85□□□□□ -0.03
SMIM7-221ENST00000627144 YTHDC1Q96MU7 727 aaKnown RBP14.85□□□□□ -0.03
SMIM7-221ENST00000627144 UACAQ9BZF9 1416 aa14.84□□□□□ -0.03
SMIM7-221ENST00000627144 NAIPQ13075 1403 aa14.83□□□□□ -0.03
SMIM7-221ENST00000627144 SIN3AQ96ST3 1273 aa14.83□□□□□ -0.04
SMIM7-221ENST00000627144 CDK13Q14004 1512 aaKnown RBP14.83□□□□□ -0.04
SMIM7-221ENST00000627144 NUP153P49790 1475 aaKnown RBP14.82□□□□□ -0.04
SMIM7-221ENST00000627144 CDK11AQ9UQ88 783 aaPredicted RBP14.8□□□□□ -0.04
SMIM7-221ENST00000627144 MIA2Q96PC5 1412 aa14.8□□□□□ -0.04
SMIM7-221ENST00000627144 AKNAQ7Z591 1439 aa14.79□□□□□ -0.04
SMIM7-221ENST00000627144 GCC2Q8IWJ2 1684 aa14.78□□□□□ -0.04
SMIM7-221ENST00000627144 ABCA8O94911 1581 aa14.77□□□□□ -0.04
SMIM7-221ENST00000627144 PPP1R15AO75807 674 aaPredicted RBP14.75□□□□□ -0.05
SMIM7-221ENST00000627144 ATP10BO94823 1461 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms