RNA–Protein interactions for RNA: ENST00000624822.1

LINC01560-202, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

Gene LINC01560, Length 1,238 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-202ENST00000624822 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.21■□□□□ 0.19
LINC01560-202ENST00000624822 DNAJC5Q9H3Z4 198 aa16.21■□□□□ 0.19
LINC01560-202ENST00000624822 ERICH3Q5RHP9 1530 aa16.2■□□□□ 0.18
LINC01560-202ENST00000624822 OSCARQ8IYS5 282 aa16.2■□□□□ 0.18
LINC01560-202ENST00000624822 KIF27Q86VH2 1401 aa16.19■□□□□ 0.18
LINC01560-202ENST00000624822 ADAMTS12P58397 1594 aa16.19■□□□□ 0.18
LINC01560-202ENST00000624822 SYNJ2O15056 1496 aa16.18■□□□□ 0.18
LINC01560-202ENST00000624822 CHMP7Q8WUX9 453 aaPredicted RBP16.18■□□□□ 0.18
LINC01560-202ENST00000624822 CUL7Q14999 1698 aa16.14■□□□□ 0.17
LINC01560-202ENST00000624822 FHAD1B1AJZ9 1412 aa16.11■□□□□ 0.17
LINC01560-202ENST00000624822 GRIN2AQ12879 1464 aa16.1■□□□□ 0.17
LINC01560-202ENST00000624822 KCNA4P22459 653 aa16.1■□□□□ 0.17
LINC01560-202ENST00000624822 RUSC2Q8N2Y8 1516 aa16.07■□□□□ 0.16
LINC01560-202ENST00000624822 IGF1RP08069 1367 aa16.05■□□□□ 0.16
LINC01560-202ENST00000624822 CEP170Q5SW79 1584 aa16.04■□□□□ 0.16
LINC01560-202ENST00000624822 CLASP1Q7Z460 1538 aa16.04■□□□□ 0.16
LINC01560-202ENST00000624822 RIMBP3CA6NJZ7 1639 aa16.01■□□□□ 0.15
LINC01560-202ENST00000624822 RIMBP3BA6NNM3 1639 aa16.01■□□□□ 0.15
LINC01560-202ENST00000624822 RIMBP3Q9UFD9 1639 aa16.01■□□□□ 0.15
LINC01560-202ENST00000624822 CARMIL1Q5VZK9 1371 aa16■□□□□ 0.15
LINC01560-202ENST00000624822 NUP160Q12769 1436 aa15.98■□□□□ 0.15
LINC01560-202ENST00000624822 ARHGEF11O15085 1522 aa15.98■□□□□ 0.15
LINC01560-202ENST00000624822 RAPGEF2Q9Y4G8 1499 aa15.94■□□□□ 0.14
LINC01560-202ENST00000624822 FAM9AQ8IZU1 332 aaPredicted RBP15.93■□□□□ 0.14
LINC01560-202ENST00000624822 EEA1Q15075 1411 aa15.93■□□□□ 0.14
LINC01560-202ENST00000624822 CTTNBP2Q8WZ74 1663 aa15.92■□□□□ 0.14
LINC01560-202ENST00000624822 SHROOM2Q13796 1616 aa15.91■□□□□ 0.14
LINC01560-202ENST00000624822 U3KPZ7 1027 aaPredicted RBP15.9■□□□□ 0.14
LINC01560-202ENST00000624822 CSRNP3Q8WYN3 585 aa15.88■□□□□ 0.13
LINC01560-202ENST00000624822 KIAA0586Q9BVV6 1533 aa15.87■□□□□ 0.13
LINC01560-202ENST00000624822 PRXQ9BXM0 1461 aa15.86■□□□□ 0.13
LINC01560-202ENST00000624822 IQGAP2Q13576 1575 aa15.86■□□□□ 0.13
LINC01560-202ENST00000624822 ERCC6L2Q5T890 1561 aa15.85■□□□□ 0.13
LINC01560-202ENST00000624822 ARAP1Q96P48 1450 aa15.84■□□□□ 0.13
LINC01560-202ENST00000624822 JPH4Q96JJ6 628 aa15.82■□□□□ 0.12
LINC01560-202ENST00000624822 PRG4Q92954 1404 aaPredicted RBP15.82■□□□□ 0.12
LINC01560-202ENST00000624822 KIF21BO75037 1637 aa15.81■□□□□ 0.12
LINC01560-202ENST00000624822 CYB5RLQ6IPT4 315 aa15.81■□□□□ 0.12
LINC01560-202ENST00000624822 EHMT2Q96KQ7 1210 aa15.76■□□□□ 0.11
LINC01560-202ENST00000624822 SLC4A2P04920 1241 aa15.73■□□□□ 0.11
LINC01560-202ENST00000624822 SPINK5Q9NQ38 1064 aaPredicted RBP15.73■□□□□ 0.11
LINC01560-202ENST00000624822 CARMIL2Q6F5E8 1435 aa15.73■□□□□ 0.11
LINC01560-202ENST00000624822 UGGT2Q9NYU1 1516 aa15.72■□□□□ 0.11
LINC01560-202ENST00000624822 KIAA0556O60303 1618 aa15.71■□□□□ 0.11
LINC01560-202ENST00000624822 GOLGA3Q08378 1498 aa15.71■□□□□ 0.1
LINC01560-202ENST00000624822 TTBK1Q5TCY1 1321 aaPredicted RBP15.7■□□□□ 0.1
LINC01560-202ENST00000624822 DISP1Q96F81 1524 aa15.68■□□□□ 0.1
LINC01560-202ENST00000624822 UBTFP17480 764 aaKnown RBP15.67■□□□□ 0.1
LINC01560-202ENST00000624822 RANGAP1P46060 587 aaPredicted RBP15.66■□□□□ 0.1
LINC01560-202ENST00000624822 CAPN15O75808 1086 aa15.65■□□□□ 0.1
LINC01560-202ENST00000624822 TNIKQ9UKE5 1360 aa15.64■□□□□ 0.09
LINC01560-202ENST00000624822 PTPRGP23470 1445 aa15.63■□□□□ 0.09
LINC01560-202ENST00000624822 SAMD9Q5K651 1589 aa15.62■□□□□ 0.09
LINC01560-202ENST00000624822 ADCY10Q96PN6 1610 aa15.61■□□□□ 0.09
LINC01560-202ENST00000624822 P3H3Q8IVL6 736 aa15.59■□□□□ 0.09
LINC01560-202ENST00000624822 DSG3P32926 999 aa15.58■□□□□ 0.08
LINC01560-202ENST00000624822 EFCAB5A4FU69 1503 aa15.56■□□□□ 0.08
LINC01560-202ENST00000624822 NPM1P06748 294 aaKnown RBP eCLIP15.54■□□□□ 0.08
LINC01560-202ENST00000624822 ABCC2Q92887 1545 aa15.53■□□□□ 0.08
LINC01560-202ENST00000624822 UACAQ9BZF9 1416 aa15.53■□□□□ 0.08
LINC01560-202ENST00000624822 FHOD3Q2V2M9 1422 aa15.51■□□□□ 0.07
LINC01560-202ENST00000624822 TRHP20396 242 aaPredicted RBP15.51■□□□□ 0.07
LINC01560-202ENST00000624822 PLB1Q6P1J6 1458 aa15.51■□□□□ 0.07
LINC01560-202ENST00000624822 ZCCHC11Q5TAX3 1644 aaKnown RBP15.5■□□□□ 0.07
LINC01560-202ENST00000624822 ABCA8O94911 1581 aa15.49■□□□□ 0.07
LINC01560-202ENST00000624822 UHRF1BP1LA0JNW5 1464 aa15.49■□□□□ 0.07
LINC01560-202ENST00000624822 RAPGEF6Q8TEU7 1601 aa15.49■□□□□ 0.07
LINC01560-202ENST00000624822 ARHGAP35Q9NRY4 1499 aa15.46■□□□□ 0.07
LINC01560-202ENST00000624822 KIF13AQ9H1H9 1805 aa15.46■□□□□ 0.07
LINC01560-202ENST00000624822 MAPKBP1O60336 1514 aa15.45■□□□□ 0.06
LINC01560-202ENST00000624822 KDM5BQ9UGL1 1544 aa15.43■□□□□ 0.06
LINC01560-202ENST00000624822 CLIP1P30622 1438 aa15.42■□□□□ 0.06
LINC01560-202ENST00000624822 LOC105371045A0A1W2PR82 267 aa15.41■□□□□ 0.06
LINC01560-202ENST00000624822 ARID3CA6NKF2 412 aa15.4■□□□□ 0.06
LINC01560-202ENST00000624822 FMN1Q68DA7 1419 aa15.4■□□□□ 0.06
LINC01560-202ENST00000624822 DIP2BQ9P265 1576 aa15.4■□□□□ 0.06
LINC01560-202ENST00000624822 ASXL2Q76L83 1435 aa15.39■□□□□ 0.05
LINC01560-202ENST00000624822 HECW1Q76N89 1606 aa15.39■□□□□ 0.05
LINC01560-202ENST00000624822 TSPOAP1O95153 1857 aa15.37■□□□□ 0.05
LINC01560-202ENST00000624822 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.37■□□□□ 0.05
LINC01560-202ENST00000624822 HNRNPUL2Q1KMD3 747 aaKnown RBP15.37■□□□□ 0.05
LINC01560-202ENST00000624822 ATP1B4Q9UN42 357 aaPredicted RBP15.37■□□□□ 0.05
LINC01560-202ENST00000624822 CEP162Q5TB80 1403 aa15.36■□□□□ 0.05
LINC01560-202ENST00000624822 NUP153P49790 1475 aaKnown RBP15.36■□□□□ 0.05
LINC01560-202ENST00000624822 ABCC10Q5T3U5 1492 aa15.36■□□□□ 0.05
LINC01560-202ENST00000624822 PCF11O94913 1555 aaKnown RBP15.34■□□□□ 0.05
LINC01560-202ENST00000624822 ABCB7O75027 752 aa15.34■□□□□ 0.05
LINC01560-202ENST00000624822 FAM69CQ0P6D2 419 aa15.34■□□□□ 0.05
LINC01560-202ENST00000624822 LRRIQ1Q96JM4 1722 aa15.34■□□□□ 0.05
LINC01560-202ENST00000624822 ATP10BO94823 1461 aa15.33■□□□□ 0.05
LINC01560-202ENST00000624822 WDR7Q9Y4E6 1490 aa15.33■□□□□ 0.05
LINC01560-202ENST00000624822 CDK13Q14004 1512 aaKnown RBP15.31■□□□□ 0.04
LINC01560-202ENST00000624822 EPRSP07814 1512 aaKnown RBP15.29■□□□□ 0.04
LINC01560-202ENST00000624822 ZNF219Q9P2Y4 722 aaPredicted RBP15.29■□□□□ 0.04
LINC01560-202ENST00000624822 GLI2P10070 1586 aa15.28■□□□□ 0.04
LINC01560-202ENST00000624822 APLP2Q06481 763 aa15.28■□□□□ 0.04
LINC01560-202ENST00000624822 KCNH8Q96L42 1107 aa15.28■□□□□ 0.04
LINC01560-202ENST00000624822 CFAP43Q8NDM7 1665 aa15.28■□□□□ 0.04
LINC01560-202ENST00000624822 MAP3K4Q9Y6R4 1608 aa15.27■□□□□ 0.03
LINC01560-202ENST00000624822 FYCO1Q9BQS8 1478 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms