RNA–Protein interactions for RNA: ENST00000624686.1

SRGAP2-216, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

Gene SRGAP2, Length 4,342 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-216ENST00000624686 TDRD9Q8NDG6 1382 aaKnown RBP23.13■■□□□ 1.29
SRGAP2-216ENST00000624686 SENP3-EIF4A1A0A087X0R7 540 aa23.11■■□□□ 1.29
SRGAP2-216ENST00000624686 MYT1Q01538 1121 aa23.09■■□□□ 1.29
SRGAP2-216ENST00000624686 IRX6P78412 446 aaPredicted RBP23.08■■□□□ 1.29
SRGAP2-216ENST00000624686 SALL2Q9Y467 1007 aaPredicted RBP23.08■■□□□ 1.29
SRGAP2-216ENST00000624686 TSPY4P0CV99 314 aa23.04■■□□□ 1.28
SRGAP2-216ENST00000624686 TSPY10P0CW01 314 aa23.04■■□□□ 1.28
SRGAP2-216ENST00000624686 CADPSQ9ULU8 1353 aa23.03■■□□□ 1.28
SRGAP2-216ENST00000624686 CLSPNQ9HAW4 1339 aa23.01■■□□□ 1.27
SRGAP2-216ENST00000624686 EIF4G2P78344 907 aaKnown RBP eCLIP23.01■■□□□ 1.27
SRGAP2-216ENST00000624686 FHAD1B1AJZ9 1412 aa23.01■■□□□ 1.27
SRGAP2-216ENST00000624686 MRS2Q9HD23 443 aa23■■□□□ 1.27
SRGAP2-216ENST00000624686 RAB3GAP2Q9H2M9 1393 aa22.99■■□□□ 1.27
SRGAP2-216ENST00000624686 KCNH8Q96L42 1107 aa22.98■■□□□ 1.27
SRGAP2-216ENST00000624686 CFDP1Q9UEE9 299 aaPredicted RBP22.97■■□□□ 1.27
SRGAP2-216ENST00000624686 EIF4G1Q04637 1599 aaKnown RBP22.97■■□□□ 1.27
SRGAP2-216ENST00000624686 FHOD3Q2V2M9 1422 aa22.94■■□□□ 1.26
SRGAP2-216ENST00000624686 FOXD1Q16676 465 aa22.94■■□□□ 1.26
SRGAP2-216ENST00000624686 PLEKHD1A6NEE1 506 aa22.93■■□□□ 1.26
SRGAP2-216ENST00000624686 DAXXQ9UER7 740 aaPredicted RBP22.93■■□□□ 1.26
SRGAP2-216ENST00000624686 SETD5Q9C0A6 1442 aa22.92■■□□□ 1.26
SRGAP2-216ENST00000624686 RGL3Q3MIN7 710 aa22.91■■□□□ 1.26
SRGAP2-216ENST00000624686 CHGAP10645 457 aaKnown RBP22.9■■□□□ 1.26
SRGAP2-216ENST00000624686 TMC1Q8TDI8 760 aa22.87■■□□□ 1.25
SRGAP2-216ENST00000624686 SYNJ1O43426 1573 aa22.84■■□□□ 1.25
SRGAP2-216ENST00000624686 DHX57Q6P158 1386 aaKnown RBP22.83■■□□□ 1.25
SRGAP2-216ENST00000624686 ARHGAP35Q9NRY4 1499 aa22.82■■□□□ 1.24
SRGAP2-216ENST00000624686 IGF1RP08069 1367 aa22.81■■□□□ 1.24
SRGAP2-216ENST00000624686 SENP3Q9H4L4 574 aaPredicted RBP22.81■■□□□ 1.24
SRGAP2-216ENST00000624686 SUPT16HQ9Y5B9 1047 aaKnown RBP22.77■■□□□ 1.24
SRGAP2-216ENST00000624686 ERCC6Q03468 1493 aa22.76■■□□□ 1.23
SRGAP2-216ENST00000624686 FANCD2Q9BXW9 1451 aa22.74■■□□□ 1.23
SRGAP2-216ENST00000624686 KIF21BO75037 1637 aa22.73■■□□□ 1.23
SRGAP2-216ENST00000624686 PDS5BQ9NTI5 1447 aa22.72■■□□□ 1.23
SRGAP2-216ENST00000624686 RAD54L2Q9Y4B4 1467 aa22.72■■□□□ 1.23
SRGAP2-216ENST00000624686 PPP1R15AO75807 674 aaPredicted RBP22.7■■□□□ 1.22
SRGAP2-216ENST00000624686 FGD5Q6ZNL6 1462 aa22.7■■□□□ 1.22
SRGAP2-216ENST00000624686 NCAPD3P42695 1498 aa22.69■■□□□ 1.22
SRGAP2-216ENST00000624686 NPM2Q86SE8 214 aaKnown RBP22.69■■□□□ 1.22
SRGAP2-216ENST00000624686 FMN1Q68DA7 1419 aa22.69■■□□□ 1.22
SRGAP2-216ENST00000624686 CARD11Q9BXL7 1154 aa22.67■■□□□ 1.22
SRGAP2-216ENST00000624686 HSPA5P11021 654 aaKnown RBP22.67■■□□□ 1.22
SRGAP2-216ENST00000624686 BCL11AQ9H165 835 aa22.67■■□□□ 1.22
SRGAP2-216ENST00000624686 RTL5Q5HYW3 569 aaPredicted RBP22.66■■□□□ 1.22
SRGAP2-216ENST00000624686 ARAP1Q96P48 1450 aa22.64■■□□□ 1.22
SRGAP2-216ENST00000624686 NPM1P06748 294 aaKnown RBP eCLIP22.63■■□□□ 1.21
SRGAP2-216ENST00000624686 CCDC136Q96JN2 1154 aa22.63■■□□□ 1.21
SRGAP2-216ENST00000624686 MPHOSPH9Q99550 1183 aa22.63■■□□□ 1.21
SRGAP2-216ENST00000624686 TIMELESSQ9UNS1 1208 aa22.63■■□□□ 1.21
SRGAP2-216ENST00000624686 CANXP27824 592 aaKnown RBP22.62■■□□□ 1.21
SRGAP2-216ENST00000624686 BICRAQ9NZM4 1560 aa22.59■■□□□ 1.21
SRGAP2-216ENST00000624686 DCAF11Q8TEB1 546 aa22.58■■□□□ 1.21
SRGAP2-216ENST00000624686 PKD2Q13563 968 aa22.58■■□□□ 1.2
SRGAP2-216ENST00000624686 PHLDB1Q86UU1 1377 aa22.57■■□□□ 1.2
SRGAP2-216ENST00000624686 L3MBTL2Q969R5 705 aa22.56■■□□□ 1.2
SRGAP2-216ENST00000624686 CFTRP13569 1480 aa22.52■■□□□ 1.2
SRGAP2-216ENST00000624686 PLPPR3Q6T4P5 718 aa22.5■■□□□ 1.19
SRGAP2-216ENST00000624686 NESP48681 1621 aa22.5■■□□□ 1.19
SRGAP2-216ENST00000624686 ANP32AP39687 249 aaKnown RBP22.49■■□□□ 1.19
SRGAP2-216ENST00000624686 PRXQ9BXM0 1461 aa22.49■■□□□ 1.19
SRGAP2-216ENST00000624686 CUX1P39880 1505 aa22.49■■□□□ 1.19
SRGAP2-216ENST00000624686 STAG3Q9UJ98 1225 aa22.47■■□□□ 1.19
SRGAP2-216ENST00000624686 WDR43Q15061 677 aaKnown RBP eCLIP22.46■■□□□ 1.19
SRGAP2-216ENST00000624686 DNAJC5BQ9UF47 199 aa22.45■■□□□ 1.18
SRGAP2-216ENST00000624686 CCER2I3L3R5 266 aa22.44■■□□□ 1.18
SRGAP2-216ENST00000624686 HNRNPMP52272 730 aaKnown RBP eCLIP22.43■■□□□ 1.18
SRGAP2-216ENST00000624686 JPH4Q96JJ6 628 aa22.43■■□□□ 1.18
SRGAP2-216ENST00000624686 TOP2BQ02880 1626 aa22.42■■□□□ 1.18
SRGAP2-216ENST00000624686 CC2D1BQ5T0F9 858 aaKnown RBP22.42■■□□□ 1.18
SRGAP2-216ENST00000624686 B4GALNT3Q6L9W6 998 aa22.42■■□□□ 1.18
SRGAP2-216ENST00000624686 ZNF644Q9H582 1327 aaPredicted RBP22.41■■□□□ 1.18
SRGAP2-216ENST00000624686 GAPVD1Q14C86 1478 aa22.41■■□□□ 1.18
SRGAP2-216ENST00000624686 NUP155O75694 1391 aa22.39■■□□□ 1.18
SRGAP2-216ENST00000624686 LRRC9Q6ZRR7 1453 aa22.39■■□□□ 1.17
SRGAP2-216ENST00000624686 AQRO60306 1485 aaKnown RBP eCLIP22.37■■□□□ 1.17
SRGAP2-216ENST00000624686 ERICH3Q5RHP9 1530 aa22.35■■□□□ 1.17
SRGAP2-216ENST00000624686 NBR1Q14596 966 aa22.35■■□□□ 1.17
SRGAP2-216ENST00000624686 SLC24A1O60721 1099 aa22.35■■□□□ 1.17
SRGAP2-216ENST00000624686 CCDC18Q5T9S5 1454 aa22.34■■□□□ 1.17
SRGAP2-216ENST00000624686 CARMIL2Q6F5E8 1435 aa22.33■■□□□ 1.17
SRGAP2-216ENST00000624686 KNSTRNQ9Y448 316 aa22.31■■□□□ 1.16
SRGAP2-216ENST00000624686 ESF1Q9H501 851 aaKnown RBP22.31■■□□□ 1.16
SRGAP2-216ENST00000624686 UNC13AQ9UPW8 1703 aa22.31■■□□□ 1.16
SRGAP2-216ENST00000624686 FGD6Q6ZV73 1430 aa22.31■■□□□ 1.16
SRGAP2-216ENST00000624686 NEFMP07197 916 aa22.31■■□□□ 1.16
SRGAP2-216ENST00000624686 RRBP1Q9P2E9 1410 aaKnown RBP22.29■■□□□ 1.16
SRGAP2-216ENST00000624686 TNNT2P45379 298 aaPredicted RBP22.28■■□□□ 1.16
SRGAP2-216ENST00000624686 NEUROD2Q15784 382 aa22.27■■□□□ 1.15
SRGAP2-216ENST00000624686 PPP4R2Q9NY27 417 aa22.25■■□□□ 1.15
SRGAP2-216ENST00000624686 ANKRD30AQ9BXX3 1397 aa22.25■■□□□ 1.15
SRGAP2-216ENST00000624686 HMGXB3Q12766 1538 aa22.24■■□□□ 1.15
SRGAP2-216ENST00000624686 POLA1P09884 1462 aaPredicted RBP22.23■■□□□ 1.15
SRGAP2-216ENST00000624686 CC2D2AQ9P2K1 1620 aa22.22■■□□□ 1.15
SRGAP2-216ENST00000624686 ZBTB47Q9UFB7 747 aaPredicted RBP22.2■■□□□ 1.15
SRGAP2-216ENST00000624686 MYOM3Q5VTT5 1437 aa22.2■■□□□ 1.14
SRGAP2-216ENST00000624686 CASKIN1Q8WXD9 1431 aa22.19■■□□□ 1.14
SRGAP2-216ENST00000624686 TSHZ2Q9NRE2 1034 aa22.19■■□□□ 1.14
SRGAP2-216ENST00000624686 TOPBP1Q92547 1522 aa22.18■■□□□ 1.14
SRGAP2-216ENST00000624686 RBM19Q9Y4C8 960 aaKnown RBP22.17■■□□□ 1.14
SRGAP2-216ENST00000624686 NCOA2Q15596 1464 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms