RNA–Protein interactions for RNA: ENST00000624686.1

SRGAP2-216, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

Gene SRGAP2, Length 4,342 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-216ENST00000624686 NISCHQ9Y2I1 1504 aa31.02■■■□□ 2.56
SRGAP2-216ENST00000624686 DCAF8L2P0C7V8 631 aa29.82■■■□□ 2.36
SRGAP2-216ENST00000624686 SHROOM4Q9ULL8 1493 aa28.96■■■□□ 2.23
SRGAP2-216ENST00000624686 SUPT5HO00267 1087 aaKnown RBP28.94■■■□□ 2.22
SRGAP2-216ENST00000624686 EHMT2Q96KQ7 1210 aa27.62■■■□□ 2.01
SRGAP2-216ENST00000624686 FAM9AQ8IZU1 332 aaPredicted RBP27.14■■□□□ 1.94
SRGAP2-216ENST00000624686 PCGF6Q9BYE7 350 aa26.99■■□□□ 1.91
SRGAP2-216ENST00000624686 TRIM41Q8WV44 630 aa26.65■■□□□ 1.86
SRGAP2-216ENST00000624686 TTBK1Q5TCY1 1321 aaPredicted RBP26.61■■□□□ 1.85
SRGAP2-216ENST00000624686 CHIC1Q5VXU3 224 aa26.57■■□□□ 1.84
SRGAP2-216ENST00000624686 LOC105371045A0A1W2PR82 267 aa26.46■■□□□ 1.83
SRGAP2-216ENST00000624686 PPARGC1BQ86YN6 1023 aaKnown RBP26.25■■□□□ 1.79
SRGAP2-216ENST00000624686 RANGAP1P46060 587 aaPredicted RBP26.23■■□□□ 1.79
SRGAP2-216ENST00000624686 APLP2Q06481 763 aa26.02■■□□□ 1.76
SRGAP2-216ENST00000624686 ABCC9O60706 1549 aa26.02■■□□□ 1.76
SRGAP2-216ENST00000624686 UBTFP17480 764 aaKnown RBP25.97■■□□□ 1.75
SRGAP2-216ENST00000624686 HRCP23327 699 aa25.89■■□□□ 1.74
SRGAP2-216ENST00000624686 ZCCHC6Q5VYS8 1495 aaKnown RBP25.85■■□□□ 1.73
SRGAP2-216ENST00000624686 CCER1Q8TC90 406 aaPredicted RBP25.85■■□□□ 1.73
SRGAP2-216ENST00000624686 TRIM26Q12899 539 aaPredicted RBP25.83■■□□□ 1.73
SRGAP2-216ENST00000624686 PABPN1Q86U42 306 aaKnown RBP eCLIP25.67■■□□□ 1.7
SRGAP2-216ENST00000624686 ZEB1P37275 1124 aaPredicted RBP25.64■■□□□ 1.69
SRGAP2-216ENST00000624686 ATP1B4Q9UN42 357 aaPredicted RBP25.5■■□□□ 1.67
SRGAP2-216ENST00000624686 CCDC180Q9P1Z9 1646 aa25.41■■□□□ 1.66
SRGAP2-216ENST00000624686 SCRIBQ14160 1630 aa25.36■■□□□ 1.65
SRGAP2-216ENST00000624686 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.31■■□□□ 1.64
SRGAP2-216ENST00000624686 HNRNPUL2Q1KMD3 747 aaKnown RBP25.25■■□□□ 1.63
SRGAP2-216ENST00000624686 MYO15BQ96JP2 1530 aa25.24■■□□□ 1.63
SRGAP2-216ENST00000624686 YTHDC1Q96MU7 727 aaKnown RBP25.17■■□□□ 1.62
SRGAP2-216ENST00000624686 ITGAEP38570 1179 aa25.14■■□□□ 1.62
SRGAP2-216ENST00000624686 CENPBP07199 599 aaPredicted RBP25.06■■□□□ 1.6
SRGAP2-216ENST00000624686 RSF1Q96T23 1441 aaPredicted RBP24.89■■□□□ 1.58
SRGAP2-216ENST00000624686 CSRNP3Q8WYN3 585 aa24.81■■□□□ 1.56
SRGAP2-216ENST00000624686 DCAF1Q9Y4B6 1507 aa24.71■■□□□ 1.55
SRGAP2-216ENST00000624686 DIEXFQ68CQ4 756 aaKnown RBP24.69■■□□□ 1.54
SRGAP2-216ENST00000624686 PELP1Q8IZL8 1130 aaKnown RBP24.69■■□□□ 1.54
SRGAP2-216ENST00000624686 CECR2Q9BXF3 1484 aa24.6■■□□□ 1.53
SRGAP2-216ENST00000624686 FAM50AQ14320 339 aaKnown RBP24.49■■□□□ 1.51
SRGAP2-216ENST00000624686 P3H3Q8IVL6 736 aa24.47■■□□□ 1.51
SRGAP2-216ENST00000624686 NACADO15069 1562 aa24.37■■□□□ 1.49
SRGAP2-216ENST00000624686 RB1CC1Q8TDY2 1594 aa24.36■■□□□ 1.49
SRGAP2-216ENST00000624686 NEUROD1Q13562 356 aa24.33■■□□□ 1.49
SRGAP2-216ENST00000624686 CNGB1Q14028 1251 aaPredicted RBP24.3■■□□□ 1.48
SRGAP2-216ENST00000624686 MROH2BQ7Z745 1585 aa24.25■■□□□ 1.47
SRGAP2-216ENST00000624686 ZNF316A6NFI3 1004 aaPredicted RBP24.24■■□□□ 1.47
SRGAP2-216ENST00000624686 POLR3GLQ9BT43 218 aa24.22■■□□□ 1.47
SRGAP2-216ENST00000624686 ARID3CA6NKF2 412 aa24.2■■□□□ 1.47
SRGAP2-216ENST00000624686 GTF3C3Q9Y5Q9 886 aa24.19■■□□□ 1.46
SRGAP2-216ENST00000624686 NEFLP07196 543 aa24.17■■□□□ 1.46
SRGAP2-216ENST00000624686 CEP162Q5TB80 1403 aa24.11■■□□□ 1.45
SRGAP2-216ENST00000624686 BAZ1AQ9NRL2 1556 aaPredicted RBP24.07■■□□□ 1.44
SRGAP2-216ENST00000624686 TRIM52Q96A61 297 aa24.06■■□□□ 1.44
SRGAP2-216ENST00000624686 WRNQ14191 1432 aaPredicted RBP eCLIP24.05■■□□□ 1.44
SRGAP2-216ENST00000624686 SOGA1O94964 1423 aa24.04■■□□□ 1.44
SRGAP2-216ENST00000624686 CLIP1P30622 1438 aa24.03■■□□□ 1.44
SRGAP2-216ENST00000624686 FBLN2P98095 1184 aa24.02■■□□□ 1.44
SRGAP2-216ENST00000624686 ACIN1Q9UKV3 1341 aaKnown RBP23.98■■□□□ 1.43
SRGAP2-216ENST00000624686 ABCC8Q09428 1581 aa23.96■■□□□ 1.43
SRGAP2-216ENST00000624686 WIZO95785 1651 aa23.95■■□□□ 1.42
SRGAP2-216ENST00000624686 BAZ1BQ9UIG0 1483 aaKnown RBP23.92■■□□□ 1.42
SRGAP2-216ENST00000624686 CCDC88BA6NC98 1476 aa23.91■■□□□ 1.42
SRGAP2-216ENST00000624686 MYT1LQ9UL68 1186 aa23.89■■□□□ 1.42
SRGAP2-216ENST00000624686 GOLGA3Q08378 1498 aa23.88■■□□□ 1.41
SRGAP2-216ENST00000624686 TNIKQ9UKE5 1360 aa23.88■■□□□ 1.41
SRGAP2-216ENST00000624686 BCANQ96GW7 911 aa23.83■■□□□ 1.41
SRGAP2-216ENST00000624686 EEA1Q15075 1411 aa23.83■■□□□ 1.4
SRGAP2-216ENST00000624686 ERICH6Q7L0X2 663 aa23.8■■□□□ 1.4
SRGAP2-216ENST00000624686 ZNF326Q5BKZ1 582 aaKnown RBP23.8■■□□□ 1.4
SRGAP2-216ENST00000624686 SCAF1Q9H7N4 1312 aaKnown RBP23.76■■□□□ 1.39
SRGAP2-216ENST00000624686 MIER1Q8N108 512 aa23.75■■□□□ 1.39
SRGAP2-216ENST00000624686 HIRIP3Q9BW71 556 aaPredicted RBP23.7■■□□□ 1.38
SRGAP2-216ENST00000624686 CHIC2Q9UKJ5 165 aa23.69■■□□□ 1.38
SRGAP2-216ENST00000624686 CEP164Q9UPV0 1460 aa23.68■■□□□ 1.38
SRGAP2-216ENST00000624686 ZNF777Q9ULD5 760 aaPredicted RBP23.68■■□□□ 1.38
SRGAP2-216ENST00000624686 ANP32CO43423 234 aa23.67■■□□□ 1.38
SRGAP2-216ENST00000624686 DDX10Q13206 875 aaKnown RBP23.67■■□□□ 1.38
SRGAP2-216ENST00000624686 RUSC2Q8N2Y8 1516 aa23.59■■□□□ 1.37
SRGAP2-216ENST00000624686 KIF27Q86VH2 1401 aa23.57■■□□□ 1.36
SRGAP2-216ENST00000624686 TOP2AP11388 1531 aaKnown RBP23.53■■□□□ 1.36
SRGAP2-216ENST00000624686 KANK4Q5T7N3 995 aaPredicted RBP23.5■■□□□ 1.35
SRGAP2-216ENST00000624686 MTUS2Q5JR59 1369 aa23.5■■□□□ 1.35
SRGAP2-216ENST00000624686 TONSLQ96HA7 1378 aa23.49■■□□□ 1.35
SRGAP2-216ENST00000624686 RRP7BPQ9NSQ0 103 aa23.44■■□□□ 1.34
SRGAP2-216ENST00000624686 SMARCA4P51532 1647 aa23.43■■□□□ 1.34
SRGAP2-216ENST00000624686 SIN3AQ96ST3 1273 aa23.4■■□□□ 1.34
SRGAP2-216ENST00000624686 CUX2O14529 1486 aa23.38■■□□□ 1.33
SRGAP2-216ENST00000624686 CDK11AQ9UQ88 783 aaPredicted RBP23.38■■□□□ 1.33
SRGAP2-216ENST00000624686 VPS8Q8N3P4 1428 aa23.37■■□□□ 1.33
SRGAP2-216ENST00000624686 SLC4A1APQ9BWU0 796 aaKnown RBP23.36■■□□□ 1.33
SRGAP2-216ENST00000624686 ATAD2BQ9ULI0 1458 aa23.34■■□□□ 1.33
SRGAP2-216ENST00000624686 CARMIL1Q5VZK9 1371 aa23.33■■□□□ 1.33
SRGAP2-216ENST00000624686 RAPGEF2Q9Y4G8 1499 aa23.31■■□□□ 1.32
SRGAP2-216ENST00000624686 FKBP8Q14318 412 aa23.3■■□□□ 1.32
SRGAP2-216ENST00000624686 SMARCA2P51531 1590 aa23.28■■□□□ 1.32
SRGAP2-216ENST00000624686 CHMP7Q8WUX9 453 aaPredicted RBP23.26■■□□□ 1.31
SRGAP2-216ENST00000624686 CCNB3Q8WWL7 1395 aa23.25■■□□□ 1.31
SRGAP2-216ENST00000624686 HNRNPUQ00839 825 aaKnown RBP eCLIP23.25■■□□□ 1.31
SRGAP2-216ENST00000624686 FAM9BQ8IZU0 186 aa23.22■■□□□ 1.31
SRGAP2-216ENST00000624686 KDM2AQ9Y2K7 1162 aa23.15■■□□□ 1.3
SRGAP2-216ENST00000624686 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms