RNA–Protein interactions for RNA: ENST00000623935.1

SOX9-AS1-217, SOX9 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene SOX9-AS1, Length 1,563 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-217ENST00000623935 SNAPC4Q5SXM2 1469 aa13.76□□□□□ -0.21
SOX9-AS1-217ENST00000623935 ADAMTS12P58397 1594 aa13.75□□□□□ -0.21
SOX9-AS1-217ENST00000623935 CHMP7Q8WUX9 453 aaPredicted RBP13.74□□□□□ -0.21
SOX9-AS1-217ENST00000623935 FBLN2P98095 1184 aa13.72□□□□□ -0.21
SOX9-AS1-217ENST00000623935 SYNJ2O15056 1496 aa13.72□□□□□ -0.21
SOX9-AS1-217ENST00000623935 TNIKQ9UKE5 1360 aa13.71□□□□□ -0.22
SOX9-AS1-217ENST00000623935 GRIN2AQ12879 1464 aa13.67□□□□□ -0.22
SOX9-AS1-217ENST00000623935 CTTNBP2Q8WZ74 1663 aa13.64□□□□□ -0.23
SOX9-AS1-217ENST00000623935 CHD1O14646 1710 aa13.61□□□□□ -0.23
SOX9-AS1-217ENST00000623935 RANGAP1P46060 587 aaPredicted RBP13.61□□□□□ -0.23
SOX9-AS1-217ENST00000623935 CEP162Q5TB80 1403 aa13.6□□□□□ -0.23
SOX9-AS1-217ENST00000623935 KIAA0586Q9BVV6 1533 aa13.58□□□□□ -0.24
SOX9-AS1-217ENST00000623935 CLIP1P30622 1438 aa13.57□□□□□ -0.24
SOX9-AS1-217ENST00000623935 NUP160Q12769 1436 aa13.57□□□□□ -0.24
SOX9-AS1-217ENST00000623935 IQGAP2Q13576 1575 aa13.57□□□□□ -0.24
SOX9-AS1-217ENST00000623935 CEP170Q5SW79 1584 aa13.56□□□□□ -0.24
SOX9-AS1-217ENST00000623935 OSCARQ8IYS5 282 aa13.51□□□□□ -0.25
SOX9-AS1-217ENST00000623935 EFCAB5A4FU69 1503 aa13.51□□□□□ -0.25
SOX9-AS1-217ENST00000623935 JPH4Q96JJ6 628 aa13.49□□□□□ -0.25
SOX9-AS1-217ENST00000623935 UGGT2Q9NYU1 1516 aa13.48□□□□□ -0.25
SOX9-AS1-217ENST00000623935 CACNB1Q02641 598 aaPredicted RBP13.48□□□□□ -0.25
SOX9-AS1-217ENST00000623935 PLPPR3Q6T4P5 718 aa13.48□□□□□ -0.25
SOX9-AS1-217ENST00000623935 CARMIL2Q6F5E8 1435 aa13.47□□□□□ -0.25
SOX9-AS1-217ENST00000623935 ARHGAP35Q9NRY4 1499 aa13.47□□□□□ -0.25
SOX9-AS1-217ENST00000623935 P3H3Q8IVL6 736 aa13.46□□□□□ -0.25
SOX9-AS1-217ENST00000623935 SAMD9Q5K651 1589 aa13.45□□□□□ -0.26
SOX9-AS1-217ENST00000623935 CLASP1Q7Z460 1538 aa13.44□□□□□ -0.26
SOX9-AS1-217ENST00000623935 ARAP1Q96P48 1450 aa13.42□□□□□ -0.26
SOX9-AS1-217ENST00000623935 KIAA0556O60303 1618 aa13.41□□□□□ -0.26
SOX9-AS1-217ENST00000623935 FHOD3Q2V2M9 1422 aa13.41□□□□□ -0.26
SOX9-AS1-217ENST00000623935 FMN1Q68DA7 1419 aa13.41□□□□□ -0.26
SOX9-AS1-217ENST00000623935 VPS8Q8N3P4 1428 aa13.41□□□□□ -0.26
SOX9-AS1-217ENST00000623935 PRG4Q92954 1404 aaPredicted RBP13.41□□□□□ -0.26
SOX9-AS1-217ENST00000623935 SHROOM2Q13796 1616 aa13.41□□□□□ -0.26
SOX9-AS1-217ENST00000623935 DISP1Q96F81 1524 aa13.4□□□□□ -0.26
SOX9-AS1-217ENST00000623935 APLP2Q06481 763 aa13.4□□□□□ -0.26
SOX9-AS1-217ENST00000623935 SLC24A1O60721 1099 aa13.39□□□□□ -0.27
SOX9-AS1-217ENST00000623935 TTBK1Q5TCY1 1321 aaPredicted RBP13.37□□□□□ -0.27
SOX9-AS1-217ENST00000623935 ATP1B4Q9UN42 357 aaPredicted RBP13.36□□□□□ -0.27
SOX9-AS1-217ENST00000623935 PTPRGP23470 1445 aa13.33□□□□□ -0.28
SOX9-AS1-217ENST00000623935 CASKIN1Q8WXD9 1431 aa13.31□□□□□ -0.28
SOX9-AS1-217ENST00000623935 FYCO1Q9BQS8 1478 aa13.31□□□□□ -0.28
SOX9-AS1-217ENST00000623935 PCF11O94913 1555 aaKnown RBP13.29□□□□□ -0.28
SOX9-AS1-217ENST00000623935 ERCC6L2Q5T890 1561 aa13.28□□□□□ -0.28
SOX9-AS1-217ENST00000623935 HECW1Q76N89 1606 aa13.27□□□□□ -0.28
SOX9-AS1-217ENST00000623935 RAPGEF6Q8TEU7 1601 aa13.27□□□□□ -0.29
SOX9-AS1-217ENST00000623935 CCDC18Q5T9S5 1454 aa13.25□□□□□ -0.29
SOX9-AS1-217ENST00000623935 PLB1Q6P1J6 1458 aa13.24□□□□□ -0.29
SOX9-AS1-217ENST00000623935 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.24□□□□□ -0.29
SOX9-AS1-217ENST00000623935 HNRNPUL2Q1KMD3 747 aaKnown RBP13.24□□□□□ -0.29
SOX9-AS1-217ENST00000623935 UACAQ9BZF9 1416 aa13.23□□□□□ -0.29
SOX9-AS1-217ENST00000623935 MAP3K1Q13233 1512 aa13.23□□□□□ -0.29
SOX9-AS1-217ENST00000623935 ARHGEF11O15085 1522 aa13.23□□□□□ -0.29
SOX9-AS1-217ENST00000623935 ABCA8O94911 1581 aa13.22□□□□□ -0.29
SOX9-AS1-217ENST00000623935 TIAM1Q13009 1591 aa13.21□□□□□ -0.29
SOX9-AS1-217ENST00000623935 CDK11AQ9UQ88 783 aaPredicted RBP13.21□□□□□ -0.29
SOX9-AS1-217ENST00000623935 EPRSP07814 1512 aaKnown RBP13.2□□□□□ -0.3
SOX9-AS1-217ENST00000623935 NUP153P49790 1475 aaKnown RBP13.2□□□□□ -0.3
SOX9-AS1-217ENST00000623935 ARID3CA6NKF2 412 aa13.2□□□□□ -0.3
SOX9-AS1-217ENST00000623935 PPARGC1BQ86YN6 1023 aaKnown RBP13.2□□□□□ -0.3
SOX9-AS1-217ENST00000623935 CFAP43Q8NDM7 1665 aa13.19□□□□□ -0.3
SOX9-AS1-217ENST00000623935 ABCC2Q92887 1545 aa13.19□□□□□ -0.3
SOX9-AS1-217ENST00000623935 RIMBP3CA6NJZ7 1639 aa13.18□□□□□ -0.3
SOX9-AS1-217ENST00000623935 RIMBP3BA6NNM3 1639 aa13.18□□□□□ -0.3
SOX9-AS1-217ENST00000623935 RIMBP3Q9UFD9 1639 aa13.18□□□□□ -0.3
SOX9-AS1-217ENST00000623935 UHRF1BP1LA0JNW5 1464 aa13.18□□□□□ -0.3
SOX9-AS1-217ENST00000623935 MTUS2Q5JR59 1369 aa13.17□□□□□ -0.3
SOX9-AS1-217ENST00000623935 LRRIQ1Q96JM4 1722 aa13.17□□□□□ -0.3
SOX9-AS1-217ENST00000623935 NPM1P06748 294 aaKnown RBP eCLIP13.16□□□□□ -0.3
SOX9-AS1-217ENST00000623935 CDK13Q14004 1512 aaKnown RBP13.16□□□□□ -0.3
SOX9-AS1-217ENST00000623935 LRRC9Q6ZRR7 1453 aa13.16□□□□□ -0.3
SOX9-AS1-217ENST00000623935 KANK4Q5T7N3 995 aaPredicted RBP13.15□□□□□ -0.3
SOX9-AS1-217ENST00000623935 PLEKHD1A6NEE1 506 aa13.14□□□□□ -0.31
SOX9-AS1-217ENST00000623935 CYB5RLQ6IPT4 315 aa13.14□□□□□ -0.31
SOX9-AS1-217ENST00000623935 ATP10BO94823 1461 aa13.13□□□□□ -0.31
SOX9-AS1-217ENST00000623935 EHBP1L1Q8N3D4 1523 aa13.12□□□□□ -0.31
SOX9-AS1-217ENST00000623935 KDM5BQ9UGL1 1544 aa13.11□□□□□ -0.31
SOX9-AS1-217ENST00000623935 ADCY10Q96PN6 1610 aa13.11□□□□□ -0.31
SOX9-AS1-217ENST00000623935 SUPT6HQ7KZ85 1726 aaKnown RBP13.09□□□□□ -0.31
SOX9-AS1-217ENST00000623935 ZCCHC11Q5TAX3 1644 aaKnown RBP13.09□□□□□ -0.31
SOX9-AS1-217ENST00000623935 TROQ12816 1431 aaPredicted RBP13.08□□□□□ -0.32
SOX9-AS1-217ENST00000623935 TRIM26Q12899 539 aaPredicted RBP13.07□□□□□ -0.32
SOX9-AS1-217ENST00000623935 DMRT2Q9Y5R5 561 aa13.07□□□□□ -0.32
SOX9-AS1-217ENST00000623935 MAGI3Q5TCQ9 1506 aa13.06□□□□□ -0.32
SOX9-AS1-217ENST00000623935 KIF14Q15058 1648 aa13.04□□□□□ -0.32
SOX9-AS1-217ENST00000623935 NCOA2Q15596 1464 aa13.04□□□□□ -0.32
SOX9-AS1-217ENST00000623935 DNAJC5Q9H3Z4 198 aa13.03□□□□□ -0.32
SOX9-AS1-217ENST00000623935 KCNH8Q96L42 1107 aa13.02□□□□□ -0.33
SOX9-AS1-217ENST00000623935 CCNB3Q8WWL7 1395 aa13.01□□□□□ -0.33
SOX9-AS1-217ENST00000623935 WDR7Q9Y4E6 1490 aa13.01□□□□□ -0.33
SOX9-AS1-217ENST00000623935 ASXL2Q76L83 1435 aa13□□□□□ -0.33
SOX9-AS1-217ENST00000623935 MYOM3Q5VTT5 1437 aa12.99□□□□□ -0.33
SOX9-AS1-217ENST00000623935 PHLDB1Q86UU1 1377 aa12.99□□□□□ -0.33
SOX9-AS1-217ENST00000623935 ITSN2Q9NZM3 1697 aa12.97□□□□□ -0.33
SOX9-AS1-217ENST00000623935 MAPKBP1O60336 1514 aa12.97□□□□□ -0.33
SOX9-AS1-217ENST00000623935 PCGF6Q9BYE7 350 aa12.96□□□□□ -0.33
SOX9-AS1-217ENST00000623935 CFDP1Q9UEE9 299 aaPredicted RBP12.95□□□□□ -0.34
SOX9-AS1-217ENST00000623935 FGD6Q6ZV73 1430 aa12.95□□□□□ -0.34
SOX9-AS1-217ENST00000623935 MIA2Q96PC5 1412 aa12.95□□□□□ -0.34
SOX9-AS1-217ENST00000623935 RRBP1Q9P2E9 1410 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms