RNA–Protein interactions for RNA: ENST00000623693.3

SEM1-224, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 5 BASIC

Gene SEM1, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-224ENST00000623693 CLIP1P30622 1438 aa13.6□□□□□ -0.23
SEM1-224ENST00000623693 MAGI1Q96QZ7 1491 aaPredicted RBP13.59□□□□□ -0.23
SEM1-224ENST00000623693 SNAPC4Q5SXM2 1469 aa13.57□□□□□ -0.24
SEM1-224ENST00000623693 EFCAB5A4FU69 1503 aa13.52□□□□□ -0.25
SEM1-224ENST00000623693 SYNJ2O15056 1496 aa13.51□□□□□ -0.25
SEM1-224ENST00000623693 RANGAP1P46060 587 aaPredicted RBP13.5□□□□□ -0.25
SEM1-224ENST00000623693 GRIN2AQ12879 1464 aa13.49□□□□□ -0.25
SEM1-224ENST00000623693 IQGAP2Q13576 1575 aa13.49□□□□□ -0.25
SEM1-224ENST00000623693 VPS8Q8N3P4 1428 aa13.47□□□□□ -0.25
SEM1-224ENST00000623693 CHD1O14646 1710 aa13.45□□□□□ -0.26
SEM1-224ENST00000623693 ARAP1Q96P48 1450 aa13.45□□□□□ -0.26
SEM1-224ENST00000623693 ARHGAP35Q9NRY4 1499 aa13.45□□□□□ -0.26
SEM1-224ENST00000623693 CHMP7Q8WUX9 453 aaPredicted RBP13.45□□□□□ -0.26
SEM1-224ENST00000623693 SAMD9Q5K651 1589 aa13.43□□□□□ -0.26
SEM1-224ENST00000623693 CEP170Q5SW79 1584 aa13.41□□□□□ -0.26
SEM1-224ENST00000623693 KIAA0586Q9BVV6 1533 aa13.4□□□□□ -0.26
SEM1-224ENST00000623693 FBLN2P98095 1184 aa13.4□□□□□ -0.26
SEM1-224ENST00000623693 APLP2Q06481 763 aa13.4□□□□□ -0.26
SEM1-224ENST00000623693 UGGT2Q9NYU1 1516 aa13.38□□□□□ -0.27
SEM1-224ENST00000623693 NUP160Q12769 1436 aa13.37□□□□□ -0.27
SEM1-224ENST00000623693 FMN1Q68DA7 1419 aa13.36□□□□□ -0.27
SEM1-224ENST00000623693 FHOD3Q2V2M9 1422 aa13.35□□□□□ -0.27
SEM1-224ENST00000623693 KIAA0556O60303 1618 aa13.34□□□□□ -0.27
SEM1-224ENST00000623693 PCF11O94913 1555 aaKnown RBP13.33□□□□□ -0.28
SEM1-224ENST00000623693 FYCO1Q9BQS8 1478 aa13.32□□□□□ -0.28
SEM1-224ENST00000623693 CFAP43Q8NDM7 1665 aa13.31□□□□□ -0.28
SEM1-224ENST00000623693 P3H3Q8IVL6 736 aa13.31□□□□□ -0.28
SEM1-224ENST00000623693 CARMIL2Q6F5E8 1435 aa13.3□□□□□ -0.28
SEM1-224ENST00000623693 TRIM26Q12899 539 aaPredicted RBP13.29□□□□□ -0.28
SEM1-224ENST00000623693 MAP3K1Q13233 1512 aa13.29□□□□□ -0.28
SEM1-224ENST00000623693 CASKIN1Q8WXD9 1431 aa13.28□□□□□ -0.28
SEM1-224ENST00000623693 HECW1Q76N89 1606 aa13.28□□□□□ -0.28
SEM1-224ENST00000623693 TIAM1Q13009 1591 aa13.27□□□□□ -0.29
SEM1-224ENST00000623693 SHROOM2Q13796 1616 aa13.26□□□□□ -0.29
SEM1-224ENST00000623693 DISP1Q96F81 1524 aa13.26□□□□□ -0.29
SEM1-224ENST00000623693 PIAS4Q8N2W9 510 aaPredicted RBP13.25□□□□□ -0.29
SEM1-224ENST00000623693 PPARGC1BQ86YN6 1023 aaKnown RBP13.24□□□□□ -0.29
SEM1-224ENST00000623693 CCDC18Q5T9S5 1454 aa13.23□□□□□ -0.29
SEM1-224ENST00000623693 JPH4Q96JJ6 628 aa13.23□□□□□ -0.29
SEM1-224ENST00000623693 RAPGEF6Q8TEU7 1601 aa13.22□□□□□ -0.29
SEM1-224ENST00000623693 ATP1B4Q9UN42 357 aaPredicted RBP13.22□□□□□ -0.29
SEM1-224ENST00000623693 CLASP1Q7Z460 1538 aa13.22□□□□□ -0.29
SEM1-224ENST00000623693 LRRIQ1Q96JM4 1722 aa13.22□□□□□ -0.29
SEM1-224ENST00000623693 PCGF6Q9BYE7 350 aa13.21□□□□□ -0.29
SEM1-224ENST00000623693 TTBK1Q5TCY1 1321 aaPredicted RBP13.2□□□□□ -0.3
SEM1-224ENST00000623693 PRG4Q92954 1404 aaPredicted RBP13.19□□□□□ -0.3
SEM1-224ENST00000623693 LRRC9Q6ZRR7 1453 aa13.17□□□□□ -0.3
SEM1-224ENST00000623693 EHBP1L1Q8N3D4 1523 aa13.15□□□□□ -0.3
SEM1-224ENST00000623693 SUPT6HQ7KZ85 1726 aaKnown RBP13.14□□□□□ -0.31
SEM1-224ENST00000623693 EPRSP07814 1512 aaKnown RBP13.13□□□□□ -0.31
SEM1-224ENST00000623693 MTUS2Q5JR59 1369 aa13.12□□□□□ -0.31
SEM1-224ENST00000623693 ABCA8O94911 1581 aa13.11□□□□□ -0.31
SEM1-224ENST00000623693 KANK4Q5T7N3 995 aaPredicted RBP13.11□□□□□ -0.31
SEM1-224ENST00000623693 PTPRGP23470 1445 aa13.1□□□□□ -0.31
SEM1-224ENST00000623693 NUP153P49790 1475 aaKnown RBP13.1□□□□□ -0.31
SEM1-224ENST00000623693 OSCARQ8IYS5 282 aa13.09□□□□□ -0.31
SEM1-224ENST00000623693 PLB1Q6P1J6 1458 aa13.09□□□□□ -0.31
SEM1-224ENST00000623693 CDK13Q14004 1512 aaKnown RBP13.08□□□□□ -0.31
SEM1-224ENST00000623693 CDK11AQ9UQ88 783 aaPredicted RBP13.08□□□□□ -0.32
SEM1-224ENST00000623693 ERCC6L2Q5T890 1561 aa13.07□□□□□ -0.32
SEM1-224ENST00000623693 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.05□□□□□ -0.32
SEM1-224ENST00000623693 HNRNPUL2Q1KMD3 747 aaKnown RBP13.05□□□□□ -0.32
SEM1-224ENST00000623693 RRBP1Q9P2E9 1410 aaKnown RBP13.05□□□□□ -0.32
SEM1-224ENST00000623693 ABCC2Q92887 1545 aa13.04□□□□□ -0.32
SEM1-224ENST00000623693 UACAQ9BZF9 1416 aa13.04□□□□□ -0.32
SEM1-224ENST00000623693 ADCY10Q96PN6 1610 aa13.03□□□□□ -0.32
SEM1-224ENST00000623693 NCOA2Q15596 1464 aa13.02□□□□□ -0.33
SEM1-224ENST00000623693 MAGI3Q5TCQ9 1506 aa13.02□□□□□ -0.33
SEM1-224ENST00000623693 ITSN2Q9NZM3 1697 aa13.02□□□□□ -0.33
SEM1-224ENST00000623693 CCNB3Q8WWL7 1395 aa13.01□□□□□ -0.33
SEM1-224ENST00000623693 KIF14Q15058 1648 aa13.01□□□□□ -0.33
SEM1-224ENST00000623693 ARID3CA6NKF2 412 aa13□□□□□ -0.33
SEM1-224ENST00000623693 UHRF1BP1LA0JNW5 1464 aa12.99□□□□□ -0.33
SEM1-224ENST00000623693 TROQ12816 1431 aaPredicted RBP12.99□□□□□ -0.33
SEM1-224ENST00000623693 ARHGEF11O15085 1522 aa12.98□□□□□ -0.33
SEM1-224ENST00000623693 PHLDB1Q86UU1 1377 aa12.98□□□□□ -0.33
SEM1-224ENST00000623693 ZCCHC11Q5TAX3 1644 aaKnown RBP12.98□□□□□ -0.33
SEM1-224ENST00000623693 MYOM3Q5VTT5 1437 aa12.97□□□□□ -0.33
SEM1-224ENST00000623693 ATP10BO94823 1461 aa12.97□□□□□ -0.33
SEM1-224ENST00000623693 PLEKHD1A6NEE1 506 aa12.96□□□□□ -0.33
SEM1-224ENST00000623693 FGD6Q6ZV73 1430 aa12.96□□□□□ -0.34
SEM1-224ENST00000623693 PTPN23Q9H3S7 1636 aa12.95□□□□□ -0.34
SEM1-224ENST00000623693 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.94□□□□□ -0.34
SEM1-224ENST00000623693 FAM50AQ14320 339 aaKnown RBP12.92□□□□□ -0.34
SEM1-224ENST00000623693 MIA2Q96PC5 1412 aa12.92□□□□□ -0.34
SEM1-224ENST00000623693 KDM5BQ9UGL1 1544 aa12.92□□□□□ -0.34
SEM1-224ENST00000623693 CDC42BPAQ5VT25 1732 aa12.91□□□□□ -0.34
SEM1-224ENST00000623693 MYO5CQ9NQX4 1742 aa12.9□□□□□ -0.34
SEM1-224ENST00000623693 TCOF1Q13428 1488 aaKnown RBP12.88□□□□□ -0.35
SEM1-224ENST00000623693 RIMBP3CA6NJZ7 1639 aa12.88□□□□□ -0.35
SEM1-224ENST00000623693 RIMBP3BA6NNM3 1639 aa12.88□□□□□ -0.35
SEM1-224ENST00000623693 RIMBP3Q9UFD9 1639 aa12.88□□□□□ -0.35
SEM1-224ENST00000623693 PREX2Q70Z35 1606 aa12.87□□□□□ -0.35
SEM1-224ENST00000623693 ITGAEP38570 1179 aa12.86□□□□□ -0.35
SEM1-224ENST00000623693 NPM1P06748 294 aaKnown RBP eCLIP12.85□□□□□ -0.35
SEM1-224ENST00000623693 ABCC10Q5T3U5 1492 aa12.85□□□□□ -0.35
SEM1-224ENST00000623693 GPATCH8Q9UKJ3 1502 aaKnown RBP12.83□□□□□ -0.35
SEM1-224ENST00000623693 CDC42BPBQ9Y5S2 1711 aa12.83□□□□□ -0.36
SEM1-224ENST00000623693 TTC37Q6PGP7 1564 aa12.83□□□□□ -0.36
SEM1-224ENST00000623693 DNMT1P26358 1616 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms