RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 PRXQ9BXM0 1461 aa32.71■■■□□ 2.83
PDLIM2-221ENST00000622702 RAPGEF2Q9Y4G8 1499 aa32.63■■■□□ 2.81
PDLIM2-221ENST00000622702 KIF21BO75037 1637 aa32.59■■■□□ 2.81
PDLIM2-221ENST00000622702 SHROOM2Q13796 1616 aa32.55■■■□□ 2.8
PDLIM2-221ENST00000622702 KIAA0586Q9BVV6 1533 aa32.54■■■□□ 2.8
PDLIM2-221ENST00000622702 JPH4Q96JJ6 628 aa32.51■■■□□ 2.79
PDLIM2-221ENST00000622702 ARAP1Q96P48 1450 aa32.5■■■□□ 2.79
PDLIM2-221ENST00000622702 CYB5RLQ6IPT4 315 aa32.48■■■□□ 2.79
PDLIM2-221ENST00000622702 ERCC6L2Q5T890 1561 aa32.48■■■□□ 2.79
PDLIM2-221ENST00000622702 GOLGA3Q08378 1498 aa32.45■■■□□ 2.79
PDLIM2-221ENST00000622702 PRG4Q92954 1404 aaPredicted RBP32.44■■■□□ 2.78
PDLIM2-221ENST00000622702 IQGAP2Q13576 1575 aa32.39■■■□□ 2.78
PDLIM2-221ENST00000622702 CTTNBP2Q8WZ74 1663 aa32.33■■■□□ 2.77
PDLIM2-221ENST00000622702 EHMT2Q96KQ7 1210 aa32.3■■■□□ 2.76
PDLIM2-221ENST00000622702 UBTFP17480 764 aaKnown RBP32.27■■■□□ 2.76
PDLIM2-221ENST00000622702 LOC105371045A0A1W2PR82 267 aa32.24■■■□□ 2.75
PDLIM2-221ENST00000622702 UGGT2Q9NYU1 1516 aa32.21■■■□□ 2.75
PDLIM2-221ENST00000622702 CARMIL2Q6F5E8 1435 aa32.21■■■□□ 2.75
PDLIM2-221ENST00000622702 TNIKQ9UKE5 1360 aa32.19■■■□□ 2.74
PDLIM2-221ENST00000622702 DISP1Q96F81 1524 aa32.15■■■□□ 2.74
PDLIM2-221ENST00000622702 TTBK1Q5TCY1 1321 aaPredicted RBP32.07■■■□□ 2.73
PDLIM2-221ENST00000622702 KIAA0556O60303 1618 aa32.07■■■□□ 2.72
PDLIM2-221ENST00000622702 PTPRGP23470 1445 aa32.07■■■□□ 2.72
PDLIM2-221ENST00000622702 RANGAP1P46060 587 aaPredicted RBP31.96■■■□□ 2.71
PDLIM2-221ENST00000622702 ADCY10Q96PN6 1610 aa31.92■■■□□ 2.7
PDLIM2-221ENST00000622702 CEP162Q5TB80 1403 aa31.91■■■□□ 2.7
PDLIM2-221ENST00000622702 SAMD9Q5K651 1589 aa31.91■■■□□ 2.7
PDLIM2-221ENST00000622702 EFCAB5A4FU69 1503 aa31.91■■■□□ 2.7
PDLIM2-221ENST00000622702 P3H3Q8IVL6 736 aa31.91■■■□□ 2.7
PDLIM2-221ENST00000622702 CLIP1P30622 1438 aa31.88■■■□□ 2.69
PDLIM2-221ENST00000622702 ARHGAP35Q9NRY4 1499 aa31.85■■■□□ 2.69
PDLIM2-221ENST00000622702 NPM1P06748 294 aaKnown RBP eCLIP31.84■■■□□ 2.69
PDLIM2-221ENST00000622702 UACAQ9BZF9 1416 aa31.84■■■□□ 2.69
PDLIM2-221ENST00000622702 UHRF1BP1LA0JNW5 1464 aa31.79■■■□□ 2.68
PDLIM2-221ENST00000622702 TRHP20396 242 aaPredicted RBP31.79■■■□□ 2.68
PDLIM2-221ENST00000622702 ABCC2Q92887 1545 aa31.78■■■□□ 2.68
PDLIM2-221ENST00000622702 PLB1Q6P1J6 1458 aa31.76■■■□□ 2.68
PDLIM2-221ENST00000622702 FHOD3Q2V2M9 1422 aa31.74■■■□□ 2.67
PDLIM2-221ENST00000622702 ABCA8O94911 1581 aa31.71■■■□□ 2.67
PDLIM2-221ENST00000622702 MAPKBP1O60336 1514 aa31.68■■■□□ 2.66
PDLIM2-221ENST00000622702 KDM5BQ9UGL1 1544 aa31.65■■■□□ 2.66
PDLIM2-221ENST00000622702 ZCCHC11Q5TAX3 1644 aaKnown RBP31.61■■■□□ 2.65
PDLIM2-221ENST00000622702 FMN1Q68DA7 1419 aa31.6■■■□□ 2.65
PDLIM2-221ENST00000622702 RAPGEF6Q8TEU7 1601 aa31.59■■■□□ 2.65
PDLIM2-221ENST00000622702 ASXL2Q76L83 1435 aa31.55■■■□□ 2.64
PDLIM2-221ENST00000622702 KIF13AQ9H1H9 1805 aa31.54■■■□□ 2.64
PDLIM2-221ENST00000622702 ABCC10Q5T3U5 1492 aa31.52■■■□□ 2.64
PDLIM2-221ENST00000622702 ARID3CA6NKF2 412 aa31.52■■■□□ 2.64
PDLIM2-221ENST00000622702 VPS8Q8N3P4 1428 aa31.49■■■□□ 2.63
PDLIM2-221ENST00000622702 DIP2BQ9P265 1576 aa31.49■■■□□ 2.63
PDLIM2-221ENST00000622702 FAM69CQ0P6D2 419 aa31.48■■■□□ 2.63
PDLIM2-221ENST00000622702 ATP10BO94823 1461 aa31.47■■■□□ 2.63
PDLIM2-221ENST00000622702 NUP153P49790 1475 aaKnown RBP31.46■■■□□ 2.63
PDLIM2-221ENST00000622702 CASKIN1Q8WXD9 1431 aa31.43■■■□□ 2.62
PDLIM2-221ENST00000622702 PCF11O94913 1555 aaKnown RBP31.41■■■□□ 2.62
PDLIM2-221ENST00000622702 WDR7Q9Y4E6 1490 aa31.4■■■□□ 2.62
PDLIM2-221ENST00000622702 FYCO1Q9BQS8 1478 aa31.39■■■□□ 2.62
PDLIM2-221ENST00000622702 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.39■■■□□ 2.62
PDLIM2-221ENST00000622702 HNRNPUL2Q1KMD3 747 aaKnown RBP31.39■■■□□ 2.62
PDLIM2-221ENST00000622702 ATP1B4Q9UN42 357 aaPredicted RBP31.38■■■□□ 2.61
PDLIM2-221ENST00000622702 EPRSP07814 1512 aaKnown RBP31.35■■■□□ 2.61
PDLIM2-221ENST00000622702 HECW1Q76N89 1606 aa31.35■■■□□ 2.61
PDLIM2-221ENST00000622702 GLI2P10070 1586 aa31.33■■■□□ 2.61
PDLIM2-221ENST00000622702 KCNH8Q96L42 1107 aa31.32■■■□□ 2.6
PDLIM2-221ENST00000622702 CDK13Q14004 1512 aaKnown RBP31.28■■■□□ 2.6
PDLIM2-221ENST00000622702 TSPOAP1O95153 1857 aa31.27■■■□□ 2.6
PDLIM2-221ENST00000622702 CCDC18Q5T9S5 1454 aa31.23■■■□□ 2.59
PDLIM2-221ENST00000622702 PLEKHD1A6NEE1 506 aa31.22■■■□□ 2.59
PDLIM2-221ENST00000622702 LRRIQ1Q96JM4 1722 aa31.21■■■□□ 2.59
PDLIM2-221ENST00000622702 MAP3K4Q9Y6R4 1608 aa31.21■■■□□ 2.59
PDLIM2-221ENST00000622702 MAP3K1Q13233 1512 aa31.15■■■□□ 2.58
PDLIM2-221ENST00000622702 CFAP43Q8NDM7 1665 aa31.14■■■□□ 2.58
PDLIM2-221ENST00000622702 PPRC1Q5VV67 1664 aaKnown RBP31.14■■■□□ 2.57
PDLIM2-221ENST00000622702 CDK11AQ9UQ88 783 aaPredicted RBP31.12■■■□□ 2.57
PDLIM2-221ENST00000622702 CD109Q6YHK3 1445 aa31.11■■■□□ 2.57
PDLIM2-221ENST00000622702 TIAM1Q13009 1591 aa31.1■■■□□ 2.57
PDLIM2-221ENST00000622702 APLP2Q06481 763 aa31.09■■■□□ 2.57
PDLIM2-221ENST00000622702 ABCA9Q8IUA7 1624 aa31.09■■■□□ 2.57
PDLIM2-221ENST00000622702 TEX14Q8IWB6 1497 aa31.04■■■□□ 2.56
PDLIM2-221ENST00000622702 MAGI3Q5TCQ9 1506 aa31.02■■■□□ 2.56
PDLIM2-221ENST00000622702 TROQ12816 1431 aaPredicted RBP31.01■■■□□ 2.55
PDLIM2-221ENST00000622702 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31■■■□□ 2.55
PDLIM2-221ENST00000622702 LRRC9Q6ZRR7 1453 aa30.97■■■□□ 2.55
PDLIM2-221ENST00000622702 KDM6BO15054 1643 aa30.97■■■□□ 2.55
PDLIM2-221ENST00000622702 TTC37Q6PGP7 1564 aa30.96■■■□□ 2.55
PDLIM2-221ENST00000622702 MTUS2Q5JR59 1369 aa30.96■■■□□ 2.55
PDLIM2-221ENST00000622702 KIF14Q15058 1648 aa30.95■■■□□ 2.54
PDLIM2-221ENST00000622702 EHBP1L1Q8N3D4 1523 aa30.94■■■□□ 2.54
PDLIM2-221ENST00000622702 KANK4Q5T7N3 995 aaPredicted RBP30.94■■■□□ 2.54
PDLIM2-221ENST00000622702 COL17A1Q9UMD9 1497 aaPredicted RBP30.84■■■□□ 2.53
PDLIM2-221ENST00000622702 MYO5CQ9NQX4 1742 aa30.82■■■□□ 2.52
PDLIM2-221ENST00000622702 NEO1Q92859 1461 aa30.81■■■□□ 2.52
PDLIM2-221ENST00000622702 PLCH2O75038 1416 aa30.81■■■□□ 2.52
PDLIM2-221ENST00000622702 SUPT6HQ7KZ85 1726 aaKnown RBP30.79■■■□□ 2.52
PDLIM2-221ENST00000622702 PHLDB1Q86UU1 1377 aa30.79■■■□□ 2.52
PDLIM2-221ENST00000622702 FANCAO15360 1455 aa30.78■■■□□ 2.52
PDLIM2-221ENST00000622702 NCOA2Q15596 1464 aa30.76■■■□□ 2.52
PDLIM2-221ENST00000622702 CFAP74Q9C0B2 1584 aa30.76■■■□□ 2.51
PDLIM2-221ENST00000622702 ARAP3Q8WWN8 1544 aa30.75■■■□□ 2.51
PDLIM2-221ENST00000622702 PPARGC1BQ86YN6 1023 aaKnown RBP30.74■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms