RNA–Protein interactions for RNA: ENST00000622534.1

GTF3C2-214, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5 BASIC

Gene GTF3C2, Length 1,858 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-214ENST00000622534 CEP170Q5SW79 1584 aa23.44■■□□□ 1.34
GTF3C2-214ENST00000622534 CTTNBP2Q8WZ74 1663 aa23.43■■□□□ 1.34
GTF3C2-214ENST00000622534 KIAA0586Q9BVV6 1533 aa23.42■■□□□ 1.34
GTF3C2-214ENST00000622534 IQGAP2Q13576 1575 aa23.36■■□□□ 1.33
GTF3C2-214ENST00000622534 CLASP1Q7Z460 1538 aa23.32■■□□□ 1.32
GTF3C2-214ENST00000622534 OSCARQ8IYS5 282 aa23.3■■□□□ 1.32
GTF3C2-214ENST00000622534 CEP162Q5TB80 1403 aa23.3■■□□□ 1.32
GTF3C2-214ENST00000622534 UGGT2Q9NYU1 1516 aa23.28■■□□□ 1.32
GTF3C2-214ENST00000622534 CLIP1P30622 1438 aa23.25■■□□□ 1.31
GTF3C2-214ENST00000622534 EFCAB5A4FU69 1503 aa23.24■■□□□ 1.31
GTF3C2-214ENST00000622534 SHROOM2Q13796 1616 aa23.24■■□□□ 1.31
GTF3C2-214ENST00000622534 JPH4Q96JJ6 628 aa23.23■■□□□ 1.31
GTF3C2-214ENST00000622534 SAMD9Q5K651 1589 aa23.21■■□□□ 1.31
GTF3C2-214ENST00000622534 ARHGAP35Q9NRY4 1499 aa23.19■■□□□ 1.3
GTF3C2-214ENST00000622534 DISP1Q96F81 1524 aa23.16■■□□□ 1.3
GTF3C2-214ENST00000622534 RANGAP1P46060 587 aaPredicted RBP23.14■■□□□ 1.29
GTF3C2-214ENST00000622534 CARMIL2Q6F5E8 1435 aa23.14■■□□□ 1.29
GTF3C2-214ENST00000622534 KIAA0556O60303 1618 aa23.13■■□□□ 1.29
GTF3C2-214ENST00000622534 PRG4Q92954 1404 aaPredicted RBP23.12■■□□□ 1.29
GTF3C2-214ENST00000622534 ARAP1Q96P48 1450 aa23.09■■□□□ 1.29
GTF3C2-214ENST00000622534 FHOD3Q2V2M9 1422 aa23.05■■□□□ 1.28
GTF3C2-214ENST00000622534 P3H3Q8IVL6 736 aa23.02■■□□□ 1.28
GTF3C2-214ENST00000622534 ERCC6L2Q5T890 1561 aa23■■□□□ 1.27
GTF3C2-214ENST00000622534 FMN1Q68DA7 1419 aa23■■□□□ 1.27
GTF3C2-214ENST00000622534 VPS8Q8N3P4 1428 aa23■■□□□ 1.27
GTF3C2-214ENST00000622534 PTPRGP23470 1445 aa22.94■■□□□ 1.26
GTF3C2-214ENST00000622534 ARHGEF11O15085 1522 aa22.92■■□□□ 1.26
GTF3C2-214ENST00000622534 CASKIN1Q8WXD9 1431 aa22.89■■□□□ 1.26
GTF3C2-214ENST00000622534 FYCO1Q9BQS8 1478 aa22.87■■□□□ 1.25
GTF3C2-214ENST00000622534 ABCA8O94911 1581 aa22.85■■□□□ 1.25
GTF3C2-214ENST00000622534 PCF11O94913 1555 aaKnown RBP22.85■■□□□ 1.25
GTF3C2-214ENST00000622534 RIMBP3CA6NJZ7 1639 aa22.84■■□□□ 1.25
GTF3C2-214ENST00000622534 RIMBP3BA6NNM3 1639 aa22.84■■□□□ 1.25
GTF3C2-214ENST00000622534 RIMBP3Q9UFD9 1639 aa22.84■■□□□ 1.25
GTF3C2-214ENST00000622534 RAPGEF6Q8TEU7 1601 aa22.83■■□□□ 1.25
GTF3C2-214ENST00000622534 PLB1Q6P1J6 1458 aa22.82■■□□□ 1.24
GTF3C2-214ENST00000622534 UACAQ9BZF9 1416 aa22.82■■□□□ 1.24
GTF3C2-214ENST00000622534 HECW1Q76N89 1606 aa22.8■■□□□ 1.24
GTF3C2-214ENST00000622534 TTBK1Q5TCY1 1321 aaPredicted RBP22.8■■□□□ 1.24
GTF3C2-214ENST00000622534 UHRF1BP1LA0JNW5 1464 aa22.79■■□□□ 1.24
GTF3C2-214ENST00000622534 MAP3K1Q13233 1512 aa22.76■■□□□ 1.23
GTF3C2-214ENST00000622534 ABCC2Q92887 1545 aa22.76■■□□□ 1.23
GTF3C2-214ENST00000622534 NUP153P49790 1475 aaKnown RBP22.76■■□□□ 1.23
GTF3C2-214ENST00000622534 CCDC18Q5T9S5 1454 aa22.74■■□□□ 1.23
GTF3C2-214ENST00000622534 EPRSP07814 1512 aaKnown RBP22.72■■□□□ 1.23
GTF3C2-214ENST00000622534 APLP2Q06481 763 aa22.69■■□□□ 1.22
GTF3C2-214ENST00000622534 DNAJC5Q9H3Z4 198 aa22.69■■□□□ 1.22
GTF3C2-214ENST00000622534 ATP1B4Q9UN42 357 aaPredicted RBP22.69■■□□□ 1.22
GTF3C2-214ENST00000622534 LRRIQ1Q96JM4 1722 aa22.68■■□□□ 1.22
GTF3C2-214ENST00000622534 ADCY10Q96PN6 1610 aa22.68■■□□□ 1.22
GTF3C2-214ENST00000622534 TIAM1Q13009 1591 aa22.68■■□□□ 1.22
GTF3C2-214ENST00000622534 CFAP43Q8NDM7 1665 aa22.68■■□□□ 1.22
GTF3C2-214ENST00000622534 KDM5BQ9UGL1 1544 aa22.66■■□□□ 1.22
GTF3C2-214ENST00000622534 ATP10BO94823 1461 aa22.66■■□□□ 1.22
GTF3C2-214ENST00000622534 CYB5RLQ6IPT4 315 aa22.63■■□□□ 1.21
GTF3C2-214ENST00000622534 CDK13Q14004 1512 aaKnown RBP22.63■■□□□ 1.21
GTF3C2-214ENST00000622534 LRRC9Q6ZRR7 1453 aa22.58■■□□□ 1.21
GTF3C2-214ENST00000622534 ZCCHC11Q5TAX3 1644 aaKnown RBP22.58■■□□□ 1.21
GTF3C2-214ENST00000622534 CDK11AQ9UQ88 783 aaPredicted RBP22.58■■□□□ 1.2
GTF3C2-214ENST00000622534 ARID3CA6NKF2 412 aa22.56■■□□□ 1.2
GTF3C2-214ENST00000622534 KANK4Q5T7N3 995 aaPredicted RBP22.54■■□□□ 1.2
GTF3C2-214ENST00000622534 EHBP1L1Q8N3D4 1523 aa22.54■■□□□ 1.2
GTF3C2-214ENST00000622534 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.54■■□□□ 1.2
GTF3C2-214ENST00000622534 HNRNPUL2Q1KMD3 747 aaKnown RBP22.54■■□□□ 1.2
GTF3C2-214ENST00000622534 MAGI3Q5TCQ9 1506 aa22.53■■□□□ 1.2
GTF3C2-214ENST00000622534 NPM1P06748 294 aaKnown RBP eCLIP22.53■■□□□ 1.2
GTF3C2-214ENST00000622534 MTUS2Q5JR59 1369 aa22.52■■□□□ 1.2
GTF3C2-214ENST00000622534 TROQ12816 1431 aaPredicted RBP22.51■■□□□ 1.19
GTF3C2-214ENST00000622534 PLEKHD1A6NEE1 506 aa22.51■■□□□ 1.19
GTF3C2-214ENST00000622534 MAPKBP1O60336 1514 aa22.46■■□□□ 1.19
GTF3C2-214ENST00000622534 WDR7Q9Y4E6 1490 aa22.44■■□□□ 1.18
GTF3C2-214ENST00000622534 ASXL2Q76L83 1435 aa22.43■■□□□ 1.18
GTF3C2-214ENST00000622534 SUPT6HQ7KZ85 1726 aaKnown RBP22.42■■□□□ 1.18
GTF3C2-214ENST00000622534 PPARGC1BQ86YN6 1023 aaKnown RBP22.41■■□□□ 1.18
GTF3C2-214ENST00000622534 KIF14Q15058 1648 aa22.39■■□□□ 1.18
GTF3C2-214ENST00000622534 NCOA2Q15596 1464 aa22.39■■□□□ 1.17
GTF3C2-214ENST00000622534 ABCC10Q5T3U5 1492 aa22.35■■□□□ 1.17
GTF3C2-214ENST00000622534 PHLDB1Q86UU1 1377 aa22.32■■□□□ 1.16
GTF3C2-214ENST00000622534 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.31■■□□□ 1.162e-16■■□□□ 11.9
GTF3C2-214ENST00000622534 KCNH8Q96L42 1107 aa22.3■■□□□ 1.16
GTF3C2-214ENST00000622534 CCNB3Q8WWL7 1395 aa22.28■■□□□ 1.16
GTF3C2-214ENST00000622534 ABCA9Q8IUA7 1624 aa22.28■■□□□ 1.16
GTF3C2-214ENST00000622534 MYOM3Q5VTT5 1437 aa22.28■■□□□ 1.16
GTF3C2-214ENST00000622534 GLI2P10070 1586 aa22.27■■□□□ 1.16
GTF3C2-214ENST00000622534 GPATCH8Q9UKJ3 1502 aaKnown RBP22.26■■□□□ 1.15
GTF3C2-214ENST00000622534 TTC37Q6PGP7 1564 aa22.26■■□□□ 1.15
GTF3C2-214ENST00000622534 MIA2Q96PC5 1412 aa22.25■■□□□ 1.15
GTF3C2-214ENST00000622534 RRBP1Q9P2E9 1410 aaKnown RBP22.24■■□□□ 1.15
GTF3C2-214ENST00000622534 ITSN2Q9NZM3 1697 aa22.24■■□□□ 1.15
GTF3C2-214ENST00000622534 ARAP3Q8WWN8 1544 aa22.22■■□□□ 1.15
GTF3C2-214ENST00000622534 DIP2BQ9P265 1576 aa22.22■■□□□ 1.15
GTF3C2-214ENST00000622534 FGD6Q6ZV73 1430 aa22.22■■□□□ 1.15
GTF3C2-214ENST00000622534 CDC42BPAQ5VT25 1732 aa22.21■■□□□ 1.15
GTF3C2-214ENST00000622534 PLCH2O75038 1416 aa22.21■■□□□ 1.15
GTF3C2-214ENST00000622534 PREX2Q70Z35 1606 aa22.21■■□□□ 1.15
GTF3C2-214ENST00000622534 MYO5CQ9NQX4 1742 aa22.2■■□□□ 1.14
GTF3C2-214ENST00000622534 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.18■■□□□ 1.14
GTF3C2-214ENST00000622534 TCOF1Q13428 1488 aaKnown RBP22.17■■□□□ 1.14
GTF3C2-214ENST00000622534 TRIM26Q12899 539 aaPredicted RBP22.16■■□□□ 1.14
GTF3C2-214ENST00000622534 CFDP1Q9UEE9 299 aaPredicted RBP22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms