RNA–Protein interactions for RNA: ENST00000622433.4

MECP2-213, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 1,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-213ENST00000622433 RIMBP3CA6NJZ7 1639 aa22.46■■□□□ 1.19
MECP2-213ENST00000622433 RIMBP3BA6NNM3 1639 aa22.46■■□□□ 1.19
MECP2-213ENST00000622433 RIMBP3Q9UFD9 1639 aa22.46■■□□□ 1.19
MECP2-213ENST00000622433 FAM9AQ8IZU1 332 aaPredicted RBP22.42■■□□□ 1.18
MECP2-213ENST00000622433 KIF21BO75037 1637 aa22.39■■□□□ 1.18
MECP2-213ENST00000622433 JPH4Q96JJ6 628 aa22.37■■□□□ 1.17
MECP2-213ENST00000622433 IQGAP2Q13576 1575 aa22.37■■□□□ 1.17
MECP2-213ENST00000622433 CTTNBP2Q8WZ74 1663 aa22.33■■□□□ 1.17
MECP2-213ENST00000622433 PRG4Q92954 1404 aaPredicted RBP22.33■■□□□ 1.17
MECP2-213ENST00000622433 ARAP1Q96P48 1450 aa22.32■■□□□ 1.16
MECP2-213ENST00000622433 ERCC6L2Q5T890 1561 aa22.31■■□□□ 1.16
MECP2-213ENST00000622433 UGGT2Q9NYU1 1516 aa22.27■■□□□ 1.16
MECP2-213ENST00000622433 GOLGA3Q08378 1498 aa22.26■■□□□ 1.15
MECP2-213ENST00000622433 CARMIL2Q6F5E8 1435 aa22.23■■□□□ 1.15
MECP2-213ENST00000622433 CYB5RLQ6IPT4 315 aa22.21■■□□□ 1.15
MECP2-213ENST00000622433 DISP1Q96F81 1524 aa22.2■■□□□ 1.14
MECP2-213ENST00000622433 KIAA0556O60303 1618 aa22.16■■□□□ 1.14
MECP2-213ENST00000622433 TNIKQ9UKE5 1360 aa22.13■■□□□ 1.13
MECP2-213ENST00000622433 UBTFP17480 764 aaKnown RBP22.11■■□□□ 1.13
MECP2-213ENST00000622433 PTPRGP23470 1445 aa22.09■■□□□ 1.13
MECP2-213ENST00000622433 SAMD9Q5K651 1589 aa22.08■■□□□ 1.13
MECP2-213ENST00000622433 EHMT2Q96KQ7 1210 aa22.06■■□□□ 1.12
MECP2-213ENST00000622433 EFCAB5A4FU69 1503 aa22.04■■□□□ 1.12
MECP2-213ENST00000622433 ADCY10Q96PN6 1610 aa21.97■■□□□ 1.11
MECP2-213ENST00000622433 UHRF1BP1LA0JNW5 1464 aa21.96■■□□□ 1.11
MECP2-213ENST00000622433 UACAQ9BZF9 1416 aa21.96■■□□□ 1.11
MECP2-213ENST00000622433 TTBK1Q5TCY1 1321 aaPredicted RBP21.95■■□□□ 1.1
MECP2-213ENST00000622433 RANGAP1P46060 587 aaPredicted RBP21.94■■□□□ 1.1
MECP2-213ENST00000622433 P3H3Q8IVL6 736 aa21.93■■□□□ 1.1
MECP2-213ENST00000622433 ABCC2Q92887 1545 aa21.93■■□□□ 1.1
MECP2-213ENST00000622433 ARHGAP35Q9NRY4 1499 aa21.92■■□□□ 1.1
MECP2-213ENST00000622433 FHOD3Q2V2M9 1422 aa21.92■■□□□ 1.1
MECP2-213ENST00000622433 ABCA8O94911 1581 aa21.91■■□□□ 1.1
MECP2-213ENST00000622433 PLB1Q6P1J6 1458 aa21.89■■□□□ 1.09
MECP2-213ENST00000622433 NPM1P06748 294 aaKnown RBP eCLIP21.86■■□□□ 1.09
MECP2-213ENST00000622433 KDM5BQ9UGL1 1544 aa21.85■■□□□ 1.09
MECP2-213ENST00000622433 CLIP1P30622 1438 aa21.84■■□□□ 1.09
MECP2-213ENST00000622433 MAPKBP1O60336 1514 aa21.84■■□□□ 1.09
MECP2-213ENST00000622433 LOC105371045A0A1W2PR82 267 aa21.83■■□□□ 1.09
MECP2-213ENST00000622433 RAPGEF6Q8TEU7 1601 aa21.82■■□□□ 1.08
MECP2-213ENST00000622433 FMN1Q68DA7 1419 aa21.81■■□□□ 1.08
MECP2-213ENST00000622433 CEP162Q5TB80 1403 aa21.79■■□□□ 1.08
MECP2-213ENST00000622433 ZCCHC11Q5TAX3 1644 aaKnown RBP21.77■■□□□ 1.08
MECP2-213ENST00000622433 NUP153P49790 1475 aaKnown RBP21.74■■□□□ 1.07
MECP2-213ENST00000622433 ATP10BO94823 1461 aa21.71■■□□□ 1.07
MECP2-213ENST00000622433 ASXL2Q76L83 1435 aa21.71■■□□□ 1.07
MECP2-213ENST00000622433 ABCC10Q5T3U5 1492 aa21.69■■□□□ 1.06
MECP2-213ENST00000622433 HECW1Q76N89 1606 aa21.69■■□□□ 1.06
MECP2-213ENST00000622433 TRHP20396 242 aaPredicted RBP21.67■■□□□ 1.06
MECP2-213ENST00000622433 DIP2BQ9P265 1576 aa21.66■■□□□ 1.06
MECP2-213ENST00000622433 CASKIN1Q8WXD9 1431 aa21.66■■□□□ 1.06
MECP2-213ENST00000622433 WDR7Q9Y4E6 1490 aa21.64■■□□□ 1.06
MECP2-213ENST00000622433 PCF11O94913 1555 aaKnown RBP21.64■■□□□ 1.05
MECP2-213ENST00000622433 FYCO1Q9BQS8 1478 aa21.63■■□□□ 1.05
MECP2-213ENST00000622433 KIF13AQ9H1H9 1805 aa21.62■■□□□ 1.05
MECP2-213ENST00000622433 EPRSP07814 1512 aaKnown RBP21.61■■□□□ 1.05
MECP2-213ENST00000622433 ARID3CA6NKF2 412 aa21.61■■□□□ 1.05
MECP2-213ENST00000622433 GLI2P10070 1586 aa21.61■■□□□ 1.05
MECP2-213ENST00000622433 FAM69CQ0P6D2 419 aa21.58■■□□□ 1.05
MECP2-213ENST00000622433 CDK13Q14004 1512 aaKnown RBP21.58■■□□□ 1.04
MECP2-213ENST00000622433 CCDC18Q5T9S5 1454 aa21.57■■□□□ 1.04
MECP2-213ENST00000622433 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.56■■□□□ 1.04
MECP2-213ENST00000622433 HNRNPUL2Q1KMD3 747 aaKnown RBP21.56■■□□□ 1.04
MECP2-213ENST00000622433 ATP1B4Q9UN42 357 aaPredicted RBP21.56■■□□□ 1.04
MECP2-213ENST00000622433 LRRIQ1Q96JM4 1722 aa21.55■■□□□ 1.04
MECP2-213ENST00000622433 VPS8Q8N3P4 1428 aa21.53■■□□□ 1.04
MECP2-213ENST00000622433 PLEKHD1A6NEE1 506 aa21.51■■□□□ 1.03
MECP2-213ENST00000622433 MAP3K4Q9Y6R4 1608 aa21.49■■□□□ 1.03
MECP2-213ENST00000622433 CDK11AQ9UQ88 783 aaPredicted RBP21.49■■□□□ 1.03
MECP2-213ENST00000622433 KCNH8Q96L42 1107 aa21.48■■□□□ 1.03
MECP2-213ENST00000622433 CFAP43Q8NDM7 1665 aa21.47■■□□□ 1.03
MECP2-213ENST00000622433 ABCA9Q8IUA7 1624 aa21.46■■□□□ 1.03
MECP2-213ENST00000622433 TROQ12816 1431 aaPredicted RBP21.45■■□□□ 1.02
MECP2-213ENST00000622433 PPRC1Q5VV67 1664 aaKnown RBP21.41■■□□□ 1.02
MECP2-213ENST00000622433 CD109Q6YHK3 1445 aa21.41■■□□□ 1.02
MECP2-213ENST00000622433 MAGI3Q5TCQ9 1506 aa21.4■■□□□ 1.02
MECP2-213ENST00000622433 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.39■■□□□ 1.01
MECP2-213ENST00000622433 TSPOAP1O95153 1857 aa21.39■■□□□ 1.01
MECP2-213ENST00000622433 TEX14Q8IWB6 1497 aa21.39■■□□□ 1.01
MECP2-213ENST00000622433 KIF14Q15058 1648 aa21.38■■□□□ 1.01
MECP2-213ENST00000622433 MAP3K1Q13233 1512 aa21.36■■□□□ 1.01
MECP2-213ENST00000622433 TIAM1Q13009 1591 aa21.36■■□□□ 1.01
MECP2-213ENST00000622433 TTC37Q6PGP7 1564 aa21.35■■□□□ 1.01
MECP2-213ENST00000622433 EHBP1L1Q8N3D4 1523 aa21.33■■□□□ 1
MECP2-213ENST00000622433 MTUS2Q5JR59 1369 aa21.32■■□□□ 1
MECP2-213ENST00000622433 ARAP3Q8WWN8 1544 aa21.29■■□□□ 1
MECP2-213ENST00000622433 PLCH2O75038 1416 aa21.27■■□□□ 1
MECP2-213ENST00000622433 NEO1Q92859 1461 aa21.26■□□□□ 0.99
MECP2-213ENST00000622433 PHLDB1Q86UU1 1377 aa21.26■□□□□ 0.99
MECP2-213ENST00000622433 MYO5CQ9NQX4 1742 aa21.26■□□□□ 0.99
MECP2-213ENST00000622433 LRRC9Q6ZRR7 1453 aa21.26■□□□□ 0.99
MECP2-213ENST00000622433 KDM6BO15054 1643 aa21.25■□□□□ 0.99
MECP2-213ENST00000622433 CFAP74Q9C0B2 1584 aa21.24■□□□□ 0.99
MECP2-213ENST00000622433 APLP2Q06481 763 aa21.23■□□□□ 0.99
MECP2-213ENST00000622433 FANCAO15360 1455 aa21.22■□□□□ 0.99
MECP2-213ENST00000622433 PREX2Q70Z35 1606 aa21.21■□□□□ 0.99
MECP2-213ENST00000622433 SUPT6HQ7KZ85 1726 aaKnown RBP21.21■□□□□ 0.99
MECP2-213ENST00000622433 COL17A1Q9UMD9 1497 aaPredicted RBP21.19■□□□□ 0.98
MECP2-213ENST00000622433 AKNAQ7Z591 1439 aa21.18■□□□□ 0.98
MECP2-213ENST00000622433 NCOA2Q15596 1464 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms