RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 EFCAB5A4FU69 1503 aa14.17□□□□□ -0.14
IGHV3-54-201ENST00000622166 POLA1P09884 1462 aaPredicted RBP14.17□□□□□ -0.14
IGHV3-54-201ENST00000622166 LAMC3Q9Y6N6 1575 aa14.16□□□□□ -0.14
IGHV3-54-201ENST00000622166 WDR97A6NE52 1622 aa14.15□□□□□ -0.14
IGHV3-54-201ENST00000622166 AQRO60306 1485 aaKnown RBP eCLIP14.15□□□□□ -0.14
IGHV3-54-201ENST00000622166 CTTNBP2Q8WZ74 1663 aa14.14□□□□□ -0.15
IGHV3-54-201ENST00000622166 PCF11O94913 1555 aaKnown RBP14.13□□□□□ -0.15
IGHV3-54-201ENST00000622166 RAD54L2Q9Y4B4 1467 aa14.13□□□□□ -0.15
IGHV3-54-201ENST00000622166 MIER1Q8N108 512 aa14.12□□□□□ -0.15
IGHV3-54-201ENST00000622166 FYCO1Q9BQS8 1478 aa14.11□□□□□ -0.15
IGHV3-54-201ENST00000622166 NESP48681 1621 aa14.1□□□□□ -0.15
IGHV3-54-201ENST00000622166 CASKIN1Q8WXD9 1431 aa14.09□□□□□ -0.15
IGHV3-54-201ENST00000622166 GTF3C3Q9Y5Q9 886 aa14.08□□□□□ -0.16
IGHV3-54-201ENST00000622166 URB2Q14146 1524 aaKnown RBP14.08□□□□□ -0.16
IGHV3-54-201ENST00000622166 ABCA5Q8WWZ7 1642 aa14.08□□□□□ -0.16
IGHV3-54-201ENST00000622166 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.08□□□□□ -0.16
IGHV3-54-201ENST00000622166 SETD5Q9C0A6 1442 aa14.07□□□□□ -0.16
IGHV3-54-201ENST00000622166 PHLDB1Q86UU1 1377 aa14.07□□□□□ -0.16
IGHV3-54-201ENST00000622166 RAB3GAP2Q9H2M9 1393 aa14.07□□□□□ -0.16
IGHV3-54-201ENST00000622166 MAPKBP1O60336 1514 aa14.05□□□□□ -0.16
IGHV3-54-201ENST00000622166 FHOD3Q2V2M9 1422 aa14.04□□□□□ -0.16
IGHV3-54-201ENST00000622166 SAMD9Q5K651 1589 aa14.03□□□□□ -0.16
IGHV3-54-201ENST00000622166 FMN1Q68DA7 1419 aa14.02□□□□□ -0.16
IGHV3-54-201ENST00000622166 SNAPC4Q5SXM2 1469 aa14□□□□□ -0.17
IGHV3-54-201ENST00000622166 PDS5BQ9NTI5 1447 aa14□□□□□ -0.17
IGHV3-54-201ENST00000622166 THOC2Q8NI27 1593 aaKnown RBP13.99□□□□□ -0.17
IGHV3-54-201ENST00000622166 GAPVD1Q14C86 1478 aa13.98□□□□□ -0.17
IGHV3-54-201ENST00000622166 KIF21AQ7Z4S6 1674 aa13.98□□□□□ -0.17
IGHV3-54-201ENST00000622166 ITGAEP38570 1179 aa13.97□□□□□ -0.17
IGHV3-54-201ENST00000622166 P3H3Q8IVL6 736 aa13.97□□□□□ -0.17
IGHV3-54-201ENST00000622166 TIMELESSQ9UNS1 1208 aa13.96□□□□□ -0.17
IGHV3-54-201ENST00000622166 TARBP1Q13395 1621 aaKnown RBP13.96□□□□□ -0.17
IGHV3-54-201ENST00000622166 GRIN2BQ13224 1484 aa13.94□□□□□ -0.18
IGHV3-54-201ENST00000622166 LRRIQ1Q96JM4 1722 aa13.94□□□□□ -0.18
IGHV3-54-201ENST00000622166 YTHDC1Q96MU7 727 aaKnown RBP13.94□□□□□ -0.18
IGHV3-54-201ENST00000622166 FGD6Q6ZV73 1430 aa13.93□□□□□ -0.18
IGHV3-54-201ENST00000622166 FAM50AQ14320 339 aaKnown RBP13.93□□□□□ -0.18
IGHV3-54-201ENST00000622166 TDRD9Q8NDG6 1382 aaKnown RBP13.92□□□□□ -0.18
IGHV3-54-201ENST00000622166 EHBP1L1Q8N3D4 1523 aa13.9□□□□□ -0.19
IGHV3-54-201ENST00000622166 PBRM1Q86U86 1689 aa13.89□□□□□ -0.19
IGHV3-54-201ENST00000622166 SUPT6HQ7KZ85 1726 aaKnown RBP13.89□□□□□ -0.19
IGHV3-54-201ENST00000622166 ATP1B4Q9UN42 357 aaPredicted RBP13.88□□□□□ -0.19
IGHV3-54-201ENST00000622166 ARHGEF11O15085 1522 aa13.87□□□□□ -0.19
IGHV3-54-201ENST00000622166 MTUS2Q5JR59 1369 aa13.86□□□□□ -0.19
IGHV3-54-201ENST00000622166 MYOM3Q5VTT5 1437 aa13.86□□□□□ -0.19
IGHV3-54-201ENST00000622166 NCOA2Q15596 1464 aa13.86□□□□□ -0.19
IGHV3-54-201ENST00000622166 CCDC18Q5T9S5 1454 aa13.86□□□□□ -0.19
IGHV3-54-201ENST00000622166 HFM1A2PYH4 1435 aa13.85□□□□□ -0.19
IGHV3-54-201ENST00000622166 PTPN23Q9H3S7 1636 aa13.85□□□□□ -0.19
IGHV3-54-201ENST00000622166 UGGT2Q9NYU1 1516 aa13.85□□□□□ -0.19
IGHV3-54-201ENST00000622166 ADAMTS12P58397 1594 aa13.83□□□□□ -0.19
IGHV3-54-201ENST00000622166 HECW1Q76N89 1606 aa13.82□□□□□ -0.2
IGHV3-54-201ENST00000622166 UACAQ9BZF9 1416 aa13.82□□□□□ -0.2
IGHV3-54-201ENST00000622166 TCOF1Q13428 1488 aaKnown RBP13.82□□□□□ -0.2
IGHV3-54-201ENST00000622166 SIN3AQ96ST3 1273 aa13.82□□□□□ -0.2
IGHV3-54-201ENST00000622166 PTPRKQ15262 1439 aa13.81□□□□□ -0.2
IGHV3-54-201ENST00000622166 MRC2Q9UBG0 1479 aa13.81□□□□□ -0.2
IGHV3-54-201ENST00000622166 IQGAP2Q13576 1575 aa13.81□□□□□ -0.2
IGHV3-54-201ENST00000622166 PPP1R15AO75807 674 aaPredicted RBP13.81□□□□□ -0.2
IGHV3-54-201ENST00000622166 MAGI3Q5TCQ9 1506 aa13.8□□□□□ -0.2
IGHV3-54-201ENST00000622166 NAIPQ13075 1403 aa13.79□□□□□ -0.2
IGHV3-54-201ENST00000622166 AKNAQ7Z591 1439 aa13.78□□□□□ -0.2
IGHV3-54-201ENST00000622166 GCC2Q8IWJ2 1684 aa13.78□□□□□ -0.2
IGHV3-54-201ENST00000622166 DNAJC5BQ9UF47 199 aa13.77□□□□□ -0.21
IGHV3-54-201ENST00000622166 WDR62O43379 1518 aa13.76□□□□□ -0.21
IGHV3-54-201ENST00000622166 EPRSP07814 1512 aaKnown RBP13.74□□□□□ -0.21
IGHV3-54-201ENST00000622166 IFT140Q96RY7 1462 aa13.74□□□□□ -0.21
IGHV3-54-201ENST00000622166 MIA2Q96PC5 1412 aa13.73□□□□□ -0.21
IGHV3-54-201ENST00000622166 TONSLQ96HA7 1378 aa13.71□□□□□ -0.22
IGHV3-54-201ENST00000622166 KDM5BQ9UGL1 1544 aa13.7□□□□□ -0.22
IGHV3-54-201ENST00000622166 KIAA0586Q9BVV6 1533 aa13.69□□□□□ -0.22
IGHV3-54-201ENST00000622166 KIAA0556O60303 1618 aa13.68□□□□□ -0.22
IGHV3-54-201ENST00000622166 CCER2I3L3R5 266 aa13.67□□□□□ -0.22
IGHV3-54-201ENST00000622166 DDX10Q13206 875 aaKnown RBP13.67□□□□□ -0.22
IGHV3-54-201ENST00000622166 CDK13Q14004 1512 aaKnown RBP13.67□□□□□ -0.22
IGHV3-54-201ENST00000622166 DISP1Q96F81 1524 aa13.65□□□□□ -0.22
IGHV3-54-201ENST00000622166 DENND4BO75064 1496 aaPredicted RBP13.64□□□□□ -0.23
IGHV3-54-201ENST00000622166 SUPT16HQ9Y5B9 1047 aaKnown RBP13.64□□□□□ -0.23
IGHV3-54-201ENST00000622166 RAPGEF6Q8TEU7 1601 aa13.64□□□□□ -0.23
IGHV3-54-201ENST00000622166 ZNF608Q9ULD9 1512 aaPredicted RBP13.64□□□□□ -0.23
IGHV3-54-201ENST00000622166 ROCK1Q13464 1354 aa13.63□□□□□ -0.23
IGHV3-54-201ENST00000622166 KDM6BO15054 1643 aa13.63□□□□□ -0.23
IGHV3-54-201ENST00000622166 DNMT1P26358 1616 aaKnown RBP13.62□□□□□ -0.23
IGHV3-54-201ENST00000622166 GRIN2AQ12879 1464 aa13.61□□□□□ -0.23
IGHV3-54-201ENST00000622166 KCNH8Q96L42 1107 aa13.61□□□□□ -0.23
IGHV3-54-201ENST00000622166 EIF4G3O43432 1585 aaKnown RBP13.61□□□□□ -0.23
IGHV3-54-201ENST00000622166 NUP153P49790 1475 aaKnown RBP13.6□□□□□ -0.23
IGHV3-54-201ENST00000622166 DAPK1P53355 1430 aa13.59□□□□□ -0.23
IGHV3-54-201ENST00000622166 RRP7BPQ9NSQ0 103 aa13.59□□□□□ -0.23
IGHV3-54-201ENST00000622166 ANP32CO43423 234 aa13.58□□□□□ -0.24
IGHV3-54-201ENST00000622166 MAGI1Q96QZ7 1491 aaPredicted RBP13.58□□□□□ -0.24
IGHV3-54-201ENST00000622166 ADCY10Q96PN6 1610 aa13.57□□□□□ -0.24
IGHV3-54-201ENST00000622166 ABCC5O15440 1437 aa13.56□□□□□ -0.24
IGHV3-54-201ENST00000622166 MPHOSPH9Q99550 1183 aa13.55□□□□□ -0.24
IGHV3-54-201ENST00000622166 CHIC2Q9UKJ5 165 aa13.55□□□□□ -0.24
IGHV3-54-201ENST00000622166 ITSN2Q9NZM3 1697 aa13.55□□□□□ -0.24
IGHV3-54-201ENST00000622166 HIRIP3Q9BW71 556 aaPredicted RBP13.54□□□□□ -0.24
IGHV3-54-201ENST00000622166 TROQ12816 1431 aaPredicted RBP13.54□□□□□ -0.24
IGHV3-54-201ENST00000622166 ADGBQ8N7X0 1667 aa13.53□□□□□ -0.24
IGHV3-54-201ENST00000622166 TRIM52Q96A61 297 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms