RNA–Protein interactions for RNA: ENST00000622142.5

PRDM11-206, Transcript of PR/SET domain 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM11, Length 10,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM11-206ENST00000622142 USP35Q9P2H5 1018 aa12.14□□□□□ -0.47
PRDM11-206ENST00000622142 LAS1LQ9Y4W2 734 aaKnown RBP12.12□□□□□ -0.47
PRDM11-206ENST00000622142 SCRIBQ14160 1630 aa12.11□□□□□ -0.47
PRDM11-206ENST00000622142 CLIP1P30622 1438 aa12.11□□□□□ -0.47
PRDM11-206ENST00000622142 NRDCO43847 1150 aa12.09□□□□□ -0.47
PRDM11-206ENST00000622142 GOLGA6L6A8MZA4 724 aa12.09□□□□□ -0.47
PRDM11-206ENST00000622142 WDR43Q15061 677 aaKnown RBP eCLIP12.09□□□□□ -0.47
PRDM11-206ENST00000622142 RTN4Q9NQC3 1192 aaKnown RBP12.08□□□□□ -0.48
PRDM11-206ENST00000622142 DNTTIP2Q5QJE6 756 aaKnown RBP12.08□□□□□ -0.48
PRDM11-206ENST00000622142 GOLGA3Q08378 1498 aa12.07□□□□□ -0.48
PRDM11-206ENST00000622142 IRX6P78412 446 aaPredicted RBP12.07□□□□□ -0.48
PRDM11-206ENST00000622142 CALRP27797 417 aaKnown RBP12.07□□□□□ -0.48
PRDM11-206ENST00000622142 MSNP26038 577 aaKnown RBP12.05□□□□□ -0.48
PRDM11-206ENST00000622142 CEP162Q5TB80 1403 aa12.05□□□□□ -0.48
PRDM11-206ENST00000622142 CASC1Q6TDU7 716 aa12.04□□□□□ -0.48
PRDM11-206ENST00000622142 RBM19Q9Y4C8 960 aaKnown RBP12.04□□□□□ -0.48
PRDM11-206ENST00000622142 MTERF4Q7Z6M4 381 aaKnown RBP12.02□□□□□ -0.48
PRDM11-206ENST00000622142 A0A0U1RQG5 324 aaPredicted RBP12.02□□□□□ -0.48
PRDM11-206ENST00000622142 EIF4G2P78344 907 aaKnown RBP eCLIP12.02□□□□□ -0.49
PRDM11-206ENST00000622142 HSP90AA2PQ14568 343 aaPredicted RBP12.01□□□□□ -0.49
PRDM11-206ENST00000622142 CCER2I3L3R5 266 aa12□□□□□ -0.49
PRDM11-206ENST00000622142 ZRSR1Q15695 479 aaKnown RBP11.99□□□□□ -0.49
PRDM11-206ENST00000622142 PNNQ9H307 717 aaKnown RBP11.99□□□□□ -0.49
PRDM11-206ENST00000622142 CFAP44Q96MT7 982 aa11.99□□□□□ -0.49
PRDM11-206ENST00000622142 TNNT3P45378 269 aaPredicted RBP11.97□□□□□ -0.49
PRDM11-206ENST00000622142 CHMP4BQ9H444 224 aaKnown RBP11.95□□□□□ -0.5
PRDM11-206ENST00000622142 GOLGA6L3A6NEY3 463 aa11.94□□□□□ -0.5
PRDM11-206ENST00000622142 HSCBQ8IWL3 235 aa11.94□□□□□ -0.5
PRDM11-206ENST00000622142 MAP7D2Q96T17 732 aa11.94□□□□□ -0.5
PRDM11-206ENST00000622142 RSF1Q96T23 1441 aaPredicted RBP11.93□□□□□ -0.5
PRDM11-206ENST00000622142 CEP164Q9UPV0 1460 aa11.93□□□□□ -0.5
PRDM11-206ENST00000622142 MS4A1P11836 297 aa11.91□□□□□ -0.5
PRDM11-206ENST00000622142 RB1CC1Q8TDY2 1594 aa11.9□□□□□ -0.5
PRDM11-206ENST00000622142 TSHZ2Q9NRE2 1034 aa11.9□□□□□ -0.5
PRDM11-206ENST00000622142 TNIKQ9UKE5 1360 aa11.9□□□□□ -0.5
PRDM11-206ENST00000622142 HSP90AB1P08238 724 aaKnown RBP11.9□□□□□ -0.51
PRDM11-206ENST00000622142 FTSJ3Q8IY81 847 aaKnown RBP11.9□□□□□ -0.51
PRDM11-206ENST00000622142 GBP4Q96PP9 640 aa11.9□□□□□ -0.51
PRDM11-206ENST00000622142 TAF3Q5VWG9 929 aa11.89□□□□□ -0.51
PRDM11-206ENST00000622142 SETQ01105 290 aaPredicted RBP11.89□□□□□ -0.51
PRDM11-206ENST00000622142 KIAA2012Q0VF49 1180 aa11.89□□□□□ -0.51
PRDM11-206ENST00000622142 IPO9Q96P70 1041 aaKnown RBP11.89□□□□□ -0.51
PRDM11-206ENST00000622142 MTUS2Q5JR59 1369 aa11.88□□□□□ -0.51
PRDM11-206ENST00000622142 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.88□□□□□ -0.51
PRDM11-206ENST00000622142 TCERG1O14776 1098 aaKnown RBP11.88□□□□□ -0.51
PRDM11-206ENST00000622142 TIMELESSQ9UNS1 1208 aa11.87□□□□□ -0.51
PRDM11-206ENST00000622142 CDCA8Q53HL2 280 aa11.87□□□□□ -0.51
PRDM11-206ENST00000622142 SALL2Q9Y467 1007 aaPredicted RBP11.86□□□□□ -0.51
PRDM11-206ENST00000622142 GOLGA6L1Q8N7Z2 621 aa11.85□□□□□ -0.51
PRDM11-206ENST00000622142 FANCIQ9NVI1 1328 aa11.85□□□□□ -0.51
PRDM11-206ENST00000622142 PKNOX2Q96KN3 472 aa11.84□□□□□ -0.51
PRDM11-206ENST00000622142 SYAP1Q96A49 352 aaPredicted RBP11.84□□□□□ -0.51
PRDM11-206ENST00000622142 B4GALNT3Q6L9W6 998 aa11.83□□□□□ -0.52
PRDM11-206ENST00000622142 RGS3P49796 1198 aa11.82□□□□□ -0.52
PRDM11-206ENST00000622142 CFAP53Q96M91 514 aa11.81□□□□□ -0.52
PRDM11-206ENST00000622142 PHF14O94880 888 aa11.8□□□□□ -0.52
PRDM11-206ENST00000622142 ABCC9O60706 1549 aa11.79□□□□□ -0.52
PRDM11-206ENST00000622142 KNSTRNQ9Y448 316 aa11.79□□□□□ -0.52
PRDM11-206ENST00000622142 NOM1Q5C9Z4 860 aaKnown RBP11.79□□□□□ -0.52
PRDM11-206ENST00000622142 ZNF777Q9ULD5 760 aaPredicted RBP11.78□□□□□ -0.52
PRDM11-206ENST00000622142 DDX11L8A8MPP1 907 aa11.77□□□□□ -0.53
PRDM11-206ENST00000622142 P3H3Q8IVL6 736 aa11.77□□□□□ -0.53
PRDM11-206ENST00000622142 CCNB3Q8WWL7 1395 aa11.77□□□□□ -0.53
PRDM11-206ENST00000622142 MCCP23508 829 aa11.76□□□□□ -0.53
PRDM11-206ENST00000622142 HTATSF1O43719 755 aaKnown RBP11.76□□□□□ -0.53
PRDM11-206ENST00000622142 PODXL2Q9NZ53 605 aa11.75□□□□□ -0.53
PRDM11-206ENST00000622142 FHAD1B1AJZ9 1412 aa11.75□□□□□ -0.53
PRDM11-206ENST00000622142 GOLGA6L4A6NEF3 574 aa11.74□□□□□ -0.53
PRDM11-206ENST00000622142 CSPP1Q1MSJ5 1256 aa11.74□□□□□ -0.53
PRDM11-206ENST00000622142 DRC7Q8IY82 874 aa11.74□□□□□ -0.53
PRDM11-206ENST00000622142 PRKCSHP14314 528 aaPredicted RBP11.74□□□□□ -0.53
PRDM11-206ENST00000622142 CCDC66A2RUB6 948 aa11.73□□□□□ -0.53
PRDM11-206ENST00000622142 VSIG10Q8N0Z9 540 aa11.72□□□□□ -0.53
PRDM11-206ENST00000622142 GPS2Q13227 327 aa11.72□□□□□ -0.53
PRDM11-206ENST00000622142 GSE1Q14687 1217 aa11.72□□□□□ -0.53
PRDM11-206ENST00000622142 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.72□□□□□ -0.53
PRDM11-206ENST00000622142 APPP05067 770 aa11.71□□□□□ -0.53
PRDM11-206ENST00000622142 HIRIP3Q9BW71 556 aaPredicted RBP11.71□□□□□ -0.53
PRDM11-206ENST00000622142 RRP9O43818 475 aaKnown RBP11.71□□□□□ -0.53
PRDM11-206ENST00000622142 VPS8Q8N3P4 1428 aa11.71□□□□□ -0.54
PRDM11-206ENST00000622142 PHLDB1Q86UU1 1377 aa11.71□□□□□ -0.54
PRDM11-206ENST00000622142 SETD5Q9C0A6 1442 aa11.71□□□□□ -0.54
PRDM11-206ENST00000622142 PLCB2Q00722 1185 aa11.7□□□□□ -0.54
PRDM11-206ENST00000622142 TEX35Q5T0J7 233 aa11.7□□□□□ -0.54
PRDM11-206ENST00000622142 KTN1Q86UP2 1357 aaKnown RBP11.7□□□□□ -0.54
PRDM11-206ENST00000622142 SKOR2Q2VWA4 1001 aaPredicted RBP11.68□□□□□ -0.54
PRDM11-206ENST00000622142 WRNQ14191 1432 aaPredicted RBP eCLIP11.68□□□□□ -0.54
PRDM11-206ENST00000622142 KIF27Q86VH2 1401 aa11.68□□□□□ -0.54
PRDM11-206ENST00000622142 ARHGAP35Q9NRY4 1499 aa11.68□□□□□ -0.54
PRDM11-206ENST00000622142 CWC15Q9P013 229 aaKnown RBP11.68□□□□□ -0.54
PRDM11-206ENST00000622142 BAZ1AQ9NRL2 1556 aaPredicted RBP11.68□□□□□ -0.54
PRDM11-206ENST00000622142 HMGB1P09429 215 aaKnown RBP11.68□□□□□ -0.54
PRDM11-206ENST00000622142 CHIC2Q9UKJ5 165 aa11.68□□□□□ -0.54
PRDM11-206ENST00000622142 TPM2P07951 284 aa11.67□□□□□ -0.54
PRDM11-206ENST00000622142 TSPYL1Q9H0U9 437 aa11.67□□□□□ -0.54
PRDM11-206ENST00000622142 ROCK2O75116 1388 aaKnown RBP11.67□□□□□ -0.54
PRDM11-206ENST00000622142 MAPK8IP3Q9UPT6 1336 aa11.66□□□□□ -0.54
PRDM11-206ENST00000622142 AMER1Q5JTC6 1135 aaPredicted RBP11.66□□□□□ -0.54
PRDM11-206ENST00000622142 RCAN3Q9UKA8 241 aa11.66□□□□□ -0.54
PRDM11-206ENST00000622142 TSPY4P0CV99 314 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms