RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-231ENST00000622045 P3H3Q8IVL6 736 aa20.29■□□□□ 0.84
SYNRG-231ENST00000622045 IRX6P78412 446 aaPredicted RBP20.27■□□□□ 0.84
SYNRG-231ENST00000622045 ARHGAP35Q9NRY4 1499 aa20.26■□□□□ 0.83
SYNRG-231ENST00000622045 BIVM-ERCC5R4GMW8 1640 aa20.23■□□□□ 0.83
SYNRG-231ENST00000622045 CUX1P39880 1505 aa20.23■□□□□ 0.83
SYNRG-231ENST00000622045 SETD5Q9C0A6 1442 aa20.22■□□□□ 0.83
SYNRG-231ENST00000622045 CUX2O14529 1486 aa20.2■□□□□ 0.82
SYNRG-231ENST00000622045 ANP32CO43423 234 aa20.19■□□□□ 0.82
SYNRG-231ENST00000622045 IGF1RP08069 1367 aa20.14■□□□□ 0.81
SYNRG-231ENST00000622045 CARMIL1Q5VZK9 1371 aa20.13■□□□□ 0.81
SYNRG-231ENST00000622045 CDK11AQ9UQ88 783 aaPredicted RBP20.13■□□□□ 0.81
SYNRG-231ENST00000622045 PHLDB1Q86UU1 1377 aa20.11■□□□□ 0.81
SYNRG-231ENST00000622045 PPP1R15AO75807 674 aaPredicted RBP20.1■□□□□ 0.81
SYNRG-231ENST00000622045 MAPKBP1O60336 1514 aa20.1■□□□□ 0.81
SYNRG-231ENST00000622045 NCAPD3P42695 1498 aa20.1■□□□□ 0.81
SYNRG-231ENST00000622045 WDR97A6NE52 1622 aa20.06■□□□□ 0.8
SYNRG-231ENST00000622045 TIMELESSQ9UNS1 1208 aa20.06■□□□□ 0.8
SYNRG-231ENST00000622045 CFTRP13569 1480 aa20.06■□□□□ 0.8
SYNRG-231ENST00000622045 LRRC9Q6ZRR7 1453 aa20.06■□□□□ 0.8
SYNRG-231ENST00000622045 HNRNPUQ00839 825 aaKnown RBP eCLIP20.04■□□□□ 0.8
SYNRG-231ENST00000622045 TIAM1Q13009 1591 aa20.04■□□□□ 0.8
SYNRG-231ENST00000622045 TONSLQ96HA7 1378 aa20.03■□□□□ 0.8
SYNRG-231ENST00000622045 FHAD1B1AJZ9 1412 aa20.03■□□□□ 0.8
SYNRG-231ENST00000622045 FANCIQ9NVI1 1328 aa20.03■□□□□ 0.8
SYNRG-231ENST00000622045 DEKP35659 375 aaKnown RBP20.02■□□□□ 0.8
SYNRG-231ENST00000622045 CCER2I3L3R5 266 aa20.02■□□□□ 0.8
SYNRG-231ENST00000622045 PRKCSHP14314 528 aaPredicted RBP20■□□□□ 0.79
SYNRG-231ENST00000622045 HMGXB3Q12766 1538 aa19.99■□□□□ 0.79
SYNRG-231ENST00000622045 NBR1Q14596 966 aa19.97■□□□□ 0.79
SYNRG-231ENST00000622045 MAP3K1Q13233 1512 aa19.95■□□□□ 0.78
SYNRG-231ENST00000622045 FHOD3Q2V2M9 1422 aa19.93■□□□□ 0.78
SYNRG-231ENST00000622045 FGD5Q6ZNL6 1462 aa19.91■□□□□ 0.78
SYNRG-231ENST00000622045 CADPSQ9ULU8 1353 aa19.9■□□□□ 0.78
SYNRG-231ENST00000622045 B4GALNT3Q6L9W6 998 aa19.89■□□□□ 0.77
SYNRG-231ENST00000622045 MTUS2Q5JR59 1369 aa19.87■□□□□ 0.77
SYNRG-231ENST00000622045 PCF11O94913 1555 aaKnown RBP19.81■□□□□ 0.76
SYNRG-231ENST00000622045 PPP4R2Q9NY27 417 aa19.81■□□□□ 0.76
SYNRG-231ENST00000622045 ANO8Q9HCE9 1232 aaPredicted RBP19.8■□□□□ 0.76
SYNRG-231ENST00000622045 CHIC2Q9UKJ5 165 aa19.8■□□□□ 0.76
SYNRG-231ENST00000622045 PAK3O75914 559 aaPredicted RBP19.79■□□□□ 0.76
SYNRG-231ENST00000622045 RRP7BPQ9NSQ0 103 aa19.78■□□□□ 0.76
SYNRG-231ENST00000622045 CCDC18Q5T9S5 1454 aa19.78■□□□□ 0.76
SYNRG-231ENST00000622045 FGD6Q6ZV73 1430 aa19.77■□□□□ 0.76
SYNRG-231ENST00000622045 MYT1LQ9UL68 1186 aa19.77■□□□□ 0.76
SYNRG-231ENST00000622045 NOP58Q9Y2X3 529 aaKnown RBP19.77■□□□□ 0.76
SYNRG-231ENST00000622045 CASKIN1Q8WXD9 1431 aa19.76■□□□□ 0.75
SYNRG-231ENST00000622045 FAM9BQ8IZU0 186 aa19.75■□□□□ 0.75
SYNRG-231ENST00000622045 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.75■□□□□ 0.75
SYNRG-231ENST00000622045 FYCO1Q9BQS8 1478 aa19.74■□□□□ 0.75
SYNRG-231ENST00000622045 RAD54L2Q9Y4B4 1467 aa19.74■□□□□ 0.75
SYNRG-231ENST00000622045 CCDC184Q52MB2 194 aa19.74■□□□□ 0.75
SYNRG-231ENST00000622045 HSPA5P11021 654 aaKnown RBP19.73■□□□□ 0.75
SYNRG-231ENST00000622045 UACAQ9BZF9 1416 aa19.73■□□□□ 0.75
SYNRG-231ENST00000622045 FMN1Q68DA7 1419 aa19.72■□□□□ 0.75
SYNRG-231ENST00000622045 EIF4G2P78344 907 aaKnown RBP eCLIP19.71■□□□□ 0.75
SYNRG-231ENST00000622045 CNGB1Q14028 1251 aaPredicted RBP19.7■□□□□ 0.74
SYNRG-231ENST00000622045 FANCD2Q9BXW9 1451 aa19.69■□□□□ 0.74
SYNRG-231ENST00000622045 CFAP43Q8NDM7 1665 aa19.69■□□□□ 0.74
SYNRG-231ENST00000622045 PTPRKQ15262 1439 aa19.68■□□□□ 0.74
SYNRG-231ENST00000622045 HFM1A2PYH4 1435 aa19.68■□□□□ 0.74
SYNRG-231ENST00000622045 RTN4Q9NQC3 1192 aaKnown RBP19.68■□□□□ 0.74
SYNRG-231ENST00000622045 SENP3-EIF4A1A0A087X0R7 540 aa19.66■□□□□ 0.74
SYNRG-231ENST00000622045 WASHC2AQ641Q2 1341 aa19.66■□□□□ 0.74
SYNRG-231ENST00000622045 ARID3CA6NKF2 412 aa19.65■□□□□ 0.74
SYNRG-231ENST00000622045 SALL2Q9Y467 1007 aaPredicted RBP19.65■□□□□ 0.74
SYNRG-231ENST00000622045 RTL5Q5HYW3 569 aaPredicted RBP19.64■□□□□ 0.73
SYNRG-231ENST00000622045 EFCAB5A4FU69 1503 aa19.64■□□□□ 0.73
SYNRG-231ENST00000622045 NAIPQ13075 1403 aa19.63■□□□□ 0.73
SYNRG-231ENST00000622045 MRS2Q9HD23 443 aa19.63■□□□□ 0.73
SYNRG-231ENST00000622045 AQRO60306 1485 aaKnown RBP eCLIP19.62■□□□□ 0.733e-7■■■■■ 29
SYNRG-231ENST00000622045 CCDC136Q96JN2 1154 aa19.62■□□□□ 0.73
SYNRG-231ENST00000622045 FOXD1Q16676 465 aa19.61■□□□□ 0.73
SYNRG-231ENST00000622045 ERICH6BQ5W0A0 696 aa19.6■□□□□ 0.73
SYNRG-231ENST00000622045 MYOM3Q5VTT5 1437 aa19.6■□□□□ 0.73
SYNRG-231ENST00000622045 TDRD9Q8NDG6 1382 aaKnown RBP19.6■□□□□ 0.73
SYNRG-231ENST00000622045 NCOA2Q15596 1464 aa19.6■□□□□ 0.73
SYNRG-231ENST00000622045 IL27Q8NEV9 243 aa19.59■□□□□ 0.73
SYNRG-231ENST00000622045 POLA1P09884 1462 aaPredicted RBP19.59■□□□□ 0.73
SYNRG-231ENST00000622045 L3MBTL2Q969R5 705 aa19.58■□□□□ 0.73
SYNRG-231ENST00000622045 POLR3GLQ9BT43 218 aa19.58■□□□□ 0.72
SYNRG-231ENST00000622045 ANP32AP39687 249 aaKnown RBP19.57■□□□□ 0.72
SYNRG-231ENST00000622045 MPHOSPH9Q99550 1183 aa19.57■□□□□ 0.72
SYNRG-231ENST00000622045 ABCA10Q8WWZ4 1543 aa19.56■□□□□ 0.72
SYNRG-231ENST00000622045 PTPN23Q9H3S7 1636 aa19.56■□□□□ 0.72
SYNRG-231ENST00000622045 PRDM2Q13029 1718 aa19.55■□□□□ 0.72
SYNRG-231ENST00000622045 ZBTB47Q9UFB7 747 aaPredicted RBP19.55■□□□□ 0.72
SYNRG-231ENST00000622045 PRKRIP1Q9H875 184 aaPredicted RBP19.54■□□□□ 0.72
SYNRG-231ENST00000622045 NPM2Q86SE8 214 aaKnown RBP19.53■□□□□ 0.72
SYNRG-231ENST00000622045 TOPBP1Q92547 1522 aa19.53■□□□□ 0.72
SYNRG-231ENST00000622045 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.51■□□□□ 0.71
SYNRG-231ENST00000622045 SNAPC4Q5SXM2 1469 aa19.51■□□□□ 0.71
SYNRG-231ENST00000622045 C11orf95C9JLR9 678 aaPredicted RBP19.51■□□□□ 0.71
SYNRG-231ENST00000622045 IPO9Q96P70 1041 aaKnown RBP19.51■□□□□ 0.71
SYNRG-231ENST00000622045 DNMBPQ6XZF7 1577 aa19.5■□□□□ 0.71
SYNRG-231ENST00000622045 NESP48681 1621 aa19.47■□□□□ 0.71
SYNRG-231ENST00000622045 CNTLNQ9NXG0 1405 aa19.47■□□□□ 0.71
SYNRG-231ENST00000622045 ZNF326Q5BKZ1 582 aaKnown RBP19.46■□□□□ 0.71
SYNRG-231ENST00000622045 LAS1LQ9Y4W2 734 aaKnown RBP19.46■□□□□ 0.71
SYNRG-231ENST00000622045 SLC4A1APQ9BWU0 796 aaKnown RBP19.46■□□□□ 0.71
SYNRG-231ENST00000622045 CCDC7Q96M83 1385 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms