RNA–Protein interactions for RNA: ENST00000621987.4

FMR1-220, Transcript of fragile X mental retardation 1, humanhuman

TSL 5 BASIC

Gene FMR1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-220ENST00000621987 CHMP7Q8WUX9 453 aaPredicted RBP20.47■□□□□ 0.87
FMR1-220ENST00000621987 PHF23Q9BUL5 403 aaPredicted RBP20.46■□□□□ 0.87
FMR1-220ENST00000621987 ARHGAP35Q9NRY4 1499 aa20.46■□□□□ 0.87
FMR1-220ENST00000621987 CEP170Q5SW79 1584 aa20.45■□□□□ 0.86
FMR1-220ENST00000621987 NUP160Q12769 1436 aa20.44■□□□□ 0.86
FMR1-220ENST00000621987 IQGAP2Q13576 1575 aa20.44■□□□□ 0.86
FMR1-220ENST00000621987 KIAA0586Q9BVV6 1533 aa20.44■□□□□ 0.86
FMR1-220ENST00000621987 ARAP1Q96P48 1450 aa20.43■□□□□ 0.86
FMR1-220ENST00000621987 CHD1O14646 1710 aa20.43■□□□□ 0.86
FMR1-220ENST00000621987 EFCAB5A4FU69 1503 aa20.42■□□□□ 0.86
FMR1-220ENST00000621987 RANGAP1P46060 587 aaPredicted RBP20.42■□□□□ 0.86
FMR1-220ENST00000621987 SENP3Q9H4L4 574 aaPredicted RBP20.41■□□□□ 0.86
FMR1-220ENST00000621987 FBLN2P98095 1184 aa20.4■□□□□ 0.86
FMR1-220ENST00000621987 SAMD9Q5K651 1589 aa20.4■□□□□ 0.86
FMR1-220ENST00000621987 VPS8Q8N3P4 1428 aa20.38■□□□□ 0.85
FMR1-220ENST00000621987 UGGT2Q9NYU1 1516 aa20.37■□□□□ 0.85
FMR1-220ENST00000621987 FHOD3Q2V2M9 1422 aa20.28■□□□□ 0.84
FMR1-220ENST00000621987 DISP1Q96F81 1524 aa20.27■□□□□ 0.83
FMR1-220ENST00000621987 P3H3Q8IVL6 736 aa20.24■□□□□ 0.83
FMR1-220ENST00000621987 KIAA0556O60303 1618 aa20.24■□□□□ 0.83
FMR1-220ENST00000621987 CLASP1Q7Z460 1538 aa20.23■□□□□ 0.83
FMR1-220ENST00000621987 SHROOM2Q13796 1616 aa20.22■□□□□ 0.83
FMR1-220ENST00000621987 JPH4Q96JJ6 628 aa20.21■□□□□ 0.83
FMR1-220ENST00000621987 FMN1Q68DA7 1419 aa20.2■□□□□ 0.82
FMR1-220ENST00000621987 PCF11O94913 1555 aaKnown RBP20.18■□□□□ 0.82
FMR1-220ENST00000621987 CARMIL2Q6F5E8 1435 aa20.16■□□□□ 0.82
FMR1-220ENST00000621987 CASKIN1Q8WXD9 1431 aa20.16■□□□□ 0.82
FMR1-220ENST00000621987 FYCO1Q9BQS8 1478 aa20.15■□□□□ 0.82
FMR1-220ENST00000621987 PRG4Q92954 1404 aaPredicted RBP20.12■□□□□ 0.81
FMR1-220ENST00000621987 MAP3K1Q13233 1512 aa20.11■□□□□ 0.81
FMR1-220ENST00000621987 CFAP43Q8NDM7 1665 aa20.07■□□□□ 0.8
FMR1-220ENST00000621987 APLP2Q06481 763 aa20.07■□□□□ 0.8
FMR1-220ENST00000621987 TIAM1Q13009 1591 aa20.06■□□□□ 0.8
FMR1-220ENST00000621987 OSCARQ8IYS5 282 aa20.05■□□□□ 0.8
FMR1-220ENST00000621987 ERCC6L2Q5T890 1561 aa20.04■□□□□ 0.8
FMR1-220ENST00000621987 LRRIQ1Q96JM4 1722 aa20.04■□□□□ 0.8
FMR1-220ENST00000621987 PPARGC1BQ86YN6 1023 aaKnown RBP20.04■□□□□ 0.8
FMR1-220ENST00000621987 HECW1Q76N89 1606 aa20.03■□□□□ 0.8
FMR1-220ENST00000621987 RAPGEF6Q8TEU7 1601 aa20.02■□□□□ 0.79
FMR1-220ENST00000621987 ABCA8O94911 1581 aa19.98■□□□□ 0.79
FMR1-220ENST00000621987 CCDC18Q5T9S5 1454 aa19.97■□□□□ 0.79
FMR1-220ENST00000621987 KANK4Q5T7N3 995 aaPredicted RBP19.97■□□□□ 0.79
FMR1-220ENST00000621987 PTPRGP23470 1445 aa19.97■□□□□ 0.79
FMR1-220ENST00000621987 PLB1Q6P1J6 1458 aa19.97■□□□□ 0.79
FMR1-220ENST00000621987 NUP153P49790 1475 aaKnown RBP19.96■□□□□ 0.79
FMR1-220ENST00000621987 LRRC9Q6ZRR7 1453 aa19.96■□□□□ 0.79
FMR1-220ENST00000621987 EPRSP07814 1512 aaKnown RBP19.96■□□□□ 0.79
FMR1-220ENST00000621987 ATP1B4Q9UN42 357 aaPredicted RBP19.95■□□□□ 0.79
FMR1-220ENST00000621987 TRIM26Q12899 539 aaPredicted RBP19.95■□□□□ 0.78
FMR1-220ENST00000621987 TTBK1Q5TCY1 1321 aaPredicted RBP19.93■□□□□ 0.78
FMR1-220ENST00000621987 CDK13Q14004 1512 aaKnown RBP19.89■□□□□ 0.78
FMR1-220ENST00000621987 UACAQ9BZF9 1416 aa19.87■□□□□ 0.77
FMR1-220ENST00000621987 MAGI3Q5TCQ9 1506 aa19.85■□□□□ 0.77
FMR1-220ENST00000621987 EHBP1L1Q8N3D4 1523 aa19.85■□□□□ 0.77
FMR1-220ENST00000621987 ABCC2Q92887 1545 aa19.84■□□□□ 0.77
FMR1-220ENST00000621987 UHRF1BP1LA0JNW5 1464 aa19.83■□□□□ 0.77
FMR1-220ENST00000621987 MTUS2Q5JR59 1369 aa19.82■□□□□ 0.76
FMR1-220ENST00000621987 PCGF6Q9BYE7 350 aa19.82■□□□□ 0.76
FMR1-220ENST00000621987 ATP10BO94823 1461 aa19.81■□□□□ 0.76
FMR1-220ENST00000621987 SUPT6HQ7KZ85 1726 aaKnown RBP19.78■□□□□ 0.76
FMR1-220ENST00000621987 ARID3CA6NKF2 412 aa19.78■□□□□ 0.76
FMR1-220ENST00000621987 ARHGEF11O15085 1522 aa19.77■□□□□ 0.76
FMR1-220ENST00000621987 RRBP1Q9P2E9 1410 aaKnown RBP19.75■□□□□ 0.75
FMR1-220ENST00000621987 NCOA2Q15596 1464 aa19.74■□□□□ 0.75
FMR1-220ENST00000621987 PHLDB1Q86UU1 1377 aa19.74■□□□□ 0.75
FMR1-220ENST00000621987 CDK11AQ9UQ88 783 aaPredicted RBP19.74■□□□□ 0.75
FMR1-220ENST00000621987 ADCY10Q96PN6 1610 aa19.74■□□□□ 0.75
FMR1-220ENST00000621987 KDM5BQ9UGL1 1544 aa19.74■□□□□ 0.75
FMR1-220ENST00000621987 TROQ12816 1431 aaPredicted RBP19.74■□□□□ 0.75
FMR1-220ENST00000621987 ZCCHC11Q5TAX3 1644 aaKnown RBP19.71■□□□□ 0.75
FMR1-220ENST00000621987 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.7■□□□□ 0.74
FMR1-220ENST00000621987 HNRNPUL2Q1KMD3 747 aaKnown RBP19.7■□□□□ 0.74
FMR1-220ENST00000621987 RIMBP3CA6NJZ7 1639 aa19.69■□□□□ 0.74
FMR1-220ENST00000621987 RIMBP3BA6NNM3 1639 aa19.69■□□□□ 0.74
FMR1-220ENST00000621987 RIMBP3Q9UFD9 1639 aa19.69■□□□□ 0.74
FMR1-220ENST00000621987 CCNB3Q8WWL7 1395 aa19.66■□□□□ 0.74
FMR1-220ENST00000621987 PLEKHD1A6NEE1 506 aa19.66■□□□□ 0.74
FMR1-220ENST00000621987 MYOM3Q5VTT5 1437 aa19.65■□□□□ 0.74
FMR1-220ENST00000621987 KIF14Q15058 1648 aa19.65■□□□□ 0.74
FMR1-220ENST00000621987 FGD6Q6ZV73 1430 aa19.63■□□□□ 0.73
FMR1-220ENST00000621987 ABCC10Q5T3U5 1492 aa19.61■□□□□ 0.73
FMR1-220ENST00000621987 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.6■□□□□ 0.73
FMR1-220ENST00000621987 MIA2Q96PC5 1412 aa19.58■□□□□ 0.73
FMR1-220ENST00000621987 ITSN2Q9NZM3 1697 aa19.57■□□□□ 0.72
FMR1-220ENST00000621987 TCOF1Q13428 1488 aaKnown RBP19.56■□□□□ 0.72
FMR1-220ENST00000621987 PTPN23Q9H3S7 1636 aa19.56■□□□□ 0.72
FMR1-220ENST00000621987 GPATCH8Q9UKJ3 1502 aaKnown RBP19.55■□□□□ 0.72
FMR1-220ENST00000621987 CDC42BPAQ5VT25 1732 aa19.53■□□□□ 0.72
FMR1-220ENST00000621987 WDR7Q9Y4E6 1490 aa19.53■□□□□ 0.72
FMR1-220ENST00000621987 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.52■□□□□ 0.72
FMR1-220ENST00000621987 TTC37Q6PGP7 1564 aa19.51■□□□□ 0.71
FMR1-220ENST00000621987 CYB5RLQ6IPT4 315 aa19.5■□□□□ 0.71
FMR1-220ENST00000621987 ASXL2Q76L83 1435 aa19.5■□□□□ 0.71
FMR1-220ENST00000621987 FAM50AQ14320 339 aaKnown RBP19.49■□□□□ 0.71
FMR1-220ENST00000621987 PREX2Q70Z35 1606 aa19.48■□□□□ 0.71
FMR1-220ENST00000621987 NPM1P06748 294 aaKnown RBP eCLIP19.48■□□□□ 0.71
FMR1-220ENST00000621987 CDC42BPBQ9Y5S2 1711 aa19.45■□□□□ 0.7
FMR1-220ENST00000621987 MYO5CQ9NQX4 1742 aa19.44■□□□□ 0.7
FMR1-220ENST00000621987 MAPKBP1O60336 1514 aa19.44■□□□□ 0.7
FMR1-220ENST00000621987 KCNH8Q96L42 1107 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms