RNA–Protein interactions for RNA: ENST00000621936.1

PCCA-210, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

Gene PCCA, Length 1,850 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-210ENST00000621936 CCNB3Q8WWL7 1395 aa17.37■□□□□ 0.37
PCCA-210ENST00000621936 WDR97A6NE52 1622 aa17.36■□□□□ 0.37
PCCA-210ENST00000621936 AQRO60306 1485 aaKnown RBP eCLIP17.34■□□□□ 0.37
PCCA-210ENST00000621936 DHX57Q6P158 1386 aaKnown RBP17.33■□□□□ 0.36
PCCA-210ENST00000621936 CFAP43Q8NDM7 1665 aa17.32■□□□□ 0.36
PCCA-210ENST00000621936 LRRC9Q6ZRR7 1453 aa17.3■□□□□ 0.36
PCCA-210ENST00000621936 CTTNBP2Q8WZ74 1663 aa17.28■□□□□ 0.36
PCCA-210ENST00000621936 ABCA5Q8WWZ7 1642 aa17.28■□□□□ 0.36
PCCA-210ENST00000621936 FYCO1Q9BQS8 1478 aa17.28■□□□□ 0.36
PCCA-210ENST00000621936 KIF21AQ7Z4S6 1674 aa17.27■□□□□ 0.36
PCCA-210ENST00000621936 CENPBP07199 599 aaPredicted RBP17.27■□□□□ 0.35
PCCA-210ENST00000621936 ACIN1Q9UKV3 1341 aaKnown RBP17.25■□□□□ 0.35
PCCA-210ENST00000621936 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.25■□□□□ 0.35
PCCA-210ENST00000621936 CASKIN1Q8WXD9 1431 aa17.25■□□□□ 0.35
PCCA-210ENST00000621936 GAPVD1Q14C86 1478 aa17.24■□□□□ 0.35
PCCA-210ENST00000621936 PCF11O94913 1555 aaKnown RBP17.22■□□□□ 0.35
PCCA-210ENST00000621936 SCAF1Q9H7N4 1312 aaKnown RBP17.21■□□□□ 0.35
PCCA-210ENST00000621936 FMN1Q68DA7 1419 aa17.21■□□□□ 0.34
PCCA-210ENST00000621936 TARBP1Q13395 1621 aaKnown RBP17.19■□□□□ 0.34
PCCA-210ENST00000621936 DNAJC5BQ9UF47 199 aa17.17■□□□□ 0.34
PCCA-210ENST00000621936 TDRD9Q8NDG6 1382 aaKnown RBP17.17■□□□□ 0.34
PCCA-210ENST00000621936 MRC2Q9UBG0 1479 aa17.17■□□□□ 0.34
PCCA-210ENST00000621936 SAMD9Q5K651 1589 aa17.17■□□□□ 0.34
PCCA-210ENST00000621936 THOC2Q8NI27 1593 aaKnown RBP17.16■□□□□ 0.34
PCCA-210ENST00000621936 SETD5Q9C0A6 1442 aa17.15■□□□□ 0.34
PCCA-210ENST00000621936 PHLDB1Q86UU1 1377 aa17.14■□□□□ 0.33
PCCA-210ENST00000621936 FHOD3Q2V2M9 1422 aa17.13■□□□□ 0.33
PCCA-210ENST00000621936 RAB3GAP2Q9H2M9 1393 aa17.11■□□□□ 0.33
PCCA-210ENST00000621936 SNAPC4Q5SXM2 1469 aa17.11■□□□□ 0.33
PCCA-210ENST00000621936 NEUROD1Q13562 356 aa17.1■□□□□ 0.33
PCCA-210ENST00000621936 PBRM1Q86U86 1689 aa17.09■□□□□ 0.33
PCCA-210ENST00000621936 TIMELESSQ9UNS1 1208 aa17.08■□□□□ 0.33
PCCA-210ENST00000621936 P3H3Q8IVL6 736 aa17.07■□□□□ 0.32
PCCA-210ENST00000621936 PELP1Q8IZL8 1130 aaKnown RBP17.07■□□□□ 0.32
PCCA-210ENST00000621936 IFT140Q96RY7 1462 aa17.06■□□□□ 0.32
PCCA-210ENST00000621936 MAPKBP1O60336 1514 aa17.06■□□□□ 0.32
PCCA-210ENST00000621936 GRIN2BQ13224 1484 aa17.05■□□□□ 0.32
PCCA-210ENST00000621936 WDR62O43379 1518 aa17.04■□□□□ 0.32
PCCA-210ENST00000621936 ADAMTS12P58397 1594 aa17.02■□□□□ 0.32
PCCA-210ENST00000621936 MIER1Q8N108 512 aa17.02■□□□□ 0.32
PCCA-210ENST00000621936 FGD6Q6ZV73 1430 aa17.01■□□□□ 0.31
PCCA-210ENST00000621936 ATP1B4Q9UN42 357 aaPredicted RBP17.01■□□□□ 0.31
PCCA-210ENST00000621936 CCDC18Q5T9S5 1454 aa17■□□□□ 0.31
PCCA-210ENST00000621936 EHBP1L1Q8N3D4 1523 aa17■□□□□ 0.31
PCCA-210ENST00000621936 SUPT6HQ7KZ85 1726 aaKnown RBP16.97■□□□□ 0.31
PCCA-210ENST00000621936 MTUS2Q5JR59 1369 aa16.97■□□□□ 0.31
PCCA-210ENST00000621936 ITGAEP38570 1179 aa16.97■□□□□ 0.31
PCCA-210ENST00000621936 FAM50AQ14320 339 aaKnown RBP16.97■□□□□ 0.31
PCCA-210ENST00000621936 IQGAP2Q13576 1575 aa16.97■□□□□ 0.31
PCCA-210ENST00000621936 ARHGEF11O15085 1522 aa16.96■□□□□ 0.31
PCCA-210ENST00000621936 LRRIQ1Q96JM4 1722 aa16.95■□□□□ 0.3
PCCA-210ENST00000621936 MYOM3Q5VTT5 1437 aa16.94■□□□□ 0.3
PCCA-210ENST00000621936 HECW1Q76N89 1606 aa16.93■□□□□ 0.3
PCCA-210ENST00000621936 HFM1A2PYH4 1435 aa16.93■□□□□ 0.3
PCCA-210ENST00000621936 NCOA2Q15596 1464 aa16.92■□□□□ 0.3
PCCA-210ENST00000621936 GTF3C3Q9Y5Q9 886 aa16.92■□□□□ 0.3
PCCA-210ENST00000621936 UGGT2Q9NYU1 1516 aa16.91■□□□□ 0.3
PCCA-210ENST00000621936 ERCC6Q03468 1493 aa16.9■□□□□ 0.3
PCCA-210ENST00000621936 TCOF1Q13428 1488 aaKnown RBP16.89■□□□□ 0.29
PCCA-210ENST00000621936 UACAQ9BZF9 1416 aa16.87■□□□□ 0.29
PCCA-210ENST00000621936 KIAA0586Q9BVV6 1533 aa16.87■□□□□ 0.29
PCCA-210ENST00000621936 ZNF608Q9ULD9 1512 aaPredicted RBP16.87■□□□□ 0.29
PCCA-210ENST00000621936 AKNAQ7Z591 1439 aa16.87■□□□□ 0.29
PCCA-210ENST00000621936 PTPN23Q9H3S7 1636 aa16.87■□□□□ 0.29
PCCA-210ENST00000621936 MIA2Q96PC5 1412 aa16.85■□□□□ 0.29
PCCA-210ENST00000621936 EIF4G3O43432 1585 aaKnown RBP16.84■□□□□ 0.29
PCCA-210ENST00000621936 MAGI1Q96QZ7 1491 aaPredicted RBP16.84■□□□□ 0.29
PCCA-210ENST00000621936 EPRSP07814 1512 aaKnown RBP16.83■□□□□ 0.28
PCCA-210ENST00000621936 GRIN2AQ12879 1464 aa16.82■□□□□ 0.28
PCCA-210ENST00000621936 NAIPQ13075 1403 aa16.82■□□□□ 0.28
PCCA-210ENST00000621936 PTPRKQ15262 1439 aa16.81■□□□□ 0.28
PCCA-210ENST00000621936 MAGI3Q5TCQ9 1506 aa16.8■□□□□ 0.28
PCCA-210ENST00000621936 PPP1R15AO75807 674 aaPredicted RBP16.8■□□□□ 0.28
PCCA-210ENST00000621936 GCC2Q8IWJ2 1684 aa16.78■□□□□ 0.28
PCCA-210ENST00000621936 KIAA0556O60303 1618 aa16.77■□□□□ 0.28
PCCA-210ENST00000621936 SYNJ2O15056 1496 aa16.76■□□□□ 0.27
PCCA-210ENST00000621936 YTHDC1Q96MU7 727 aaKnown RBP16.76■□□□□ 0.27
PCCA-210ENST00000621936 SIN3AQ96ST3 1273 aa16.76■□□□□ 0.27
PCCA-210ENST00000621936 DISP1Q96F81 1524 aa16.74■□□□□ 0.27
PCCA-210ENST00000621936 CHMP7Q8WUX9 453 aaPredicted RBP16.71■□□□□ 0.27
PCCA-210ENST00000621936 ROCK1Q13464 1354 aa16.7■□□□□ 0.26
PCCA-210ENST00000621936 TONSLQ96HA7 1378 aa16.7■□□□□ 0.26
PCCA-210ENST00000621936 RAPGEF6Q8TEU7 1601 aa16.69■□□□□ 0.26
PCCA-210ENST00000621936 CDK11AQ9UQ88 783 aaPredicted RBP16.68■□□□□ 0.26
PCCA-210ENST00000621936 CDK13Q14004 1512 aaKnown RBP16.67■□□□□ 0.26
PCCA-210ENST00000621936 NUP160Q12769 1436 aa16.67■□□□□ 0.26
PCCA-210ENST00000621936 CEP170Q5SW79 1584 aa16.67■□□□□ 0.26
PCCA-210ENST00000621936 CARMIL2Q6F5E8 1435 aa16.66■□□□□ 0.26
PCCA-210ENST00000621936 NUP153P49790 1475 aaKnown RBP16.65■□□□□ 0.26
PCCA-210ENST00000621936 DNMT1P26358 1616 aaKnown RBP16.64■□□□□ 0.25
PCCA-210ENST00000621936 CCER2I3L3R5 266 aa16.62■□□□□ 0.25
PCCA-210ENST00000621936 KDM5BQ9UGL1 1544 aa16.62■□□□□ 0.25
PCCA-210ENST00000621936 ADCY10Q96PN6 1610 aa16.61■□□□□ 0.25
PCCA-210ENST00000621936 PLPPR3Q6T4P5 718 aa16.61■□□□□ 0.25
PCCA-210ENST00000621936 DAPK1P53355 1430 aa16.6■□□□□ 0.25
PCCA-210ENST00000621936 TROQ12816 1431 aaPredicted RBP16.59■□□□□ 0.25
PCCA-210ENST00000621936 JPH4Q96JJ6 628 aa16.59■□□□□ 0.25
PCCA-210ENST00000621936 ITSN2Q9NZM3 1697 aa16.58■□□□□ 0.25
PCCA-210ENST00000621936 DENND4BO75064 1496 aaPredicted RBP16.58■□□□□ 0.24
PCCA-210ENST00000621936 ABCC5O15440 1437 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms