RNA–Protein interactions for RNA: ENST00000621861.1

LINC01517-204, Transcript of long intergenic non-protein coding RNA 1517, humanhuman

TSL 5

Gene LINC01517, Length 1,051 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01517-204ENST00000621861 FANCD2Q9BXW9 1451 aa8.41□□□□□ -1.06
LINC01517-204ENST00000621861 URB2Q14146 1524 aaKnown RBP8.39□□□□□ -1.07
LINC01517-204ENST00000621861 CAPN15O75808 1086 aa8.38□□□□□ -1.07
LINC01517-204ENST00000621861 CLASP1Q7Z460 1538 aa8.37□□□□□ -1.07
LINC01517-204ENST00000621861 IFT140Q96RY7 1462 aa8.37□□□□□ -1.07
LINC01517-204ENST00000621861 DCAF1Q9Y4B6 1507 aa8.36□□□□□ -1.07
LINC01517-204ENST00000621861 SYNJ1O43426 1573 aa8.33□□□□□ -1.08
LINC01517-204ENST00000621861 SLC4A2P04920 1241 aa8.33□□□□□ -1.08
LINC01517-204ENST00000621861 AQRO60306 1485 aaKnown RBP eCLIP8.32□□□□□ -1.08
LINC01517-204ENST00000621861 ZBTB22O15209 634 aa8.31□□□□□ -1.08
LINC01517-204ENST00000621861 TOP2BQ02880 1626 aa8.31□□□□□ -1.08
LINC01517-204ENST00000621861 ABCC10Q5T3U5 1492 aa8.3□□□□□ -1.08
LINC01517-204ENST00000621861 CHMP7Q8WUX9 453 aaPredicted RBP8.29□□□□□ -1.08
LINC01517-204ENST00000621861 ZCCHC6Q5VYS8 1495 aaKnown RBP8.27□□□□□ -1.09
LINC01517-204ENST00000621861 DIP2BQ9P265 1576 aa8.26□□□□□ -1.09
LINC01517-204ENST00000621861 ABCB7O75027 752 aa8.25□□□□□ -1.09
LINC01517-204ENST00000621861 NPM1P06748 294 aaKnown RBP eCLIP8.25□□□□□ -1.09
LINC01517-204ENST00000621861 PCF11O94913 1555 aaKnown RBP8.2□□□□□ -1.1
LINC01517-204ENST00000621861 HSPA2P54652 639 aa8.2□□□□□ -1.1
LINC01517-204ENST00000621861 IFFO2Q5TF58 517 aa8.19□□□□□ -1.1
LINC01517-204ENST00000621861 FOXD4L1Q9NU39 408 aa8.17□□□□□ -1.1
LINC01517-204ENST00000621861 SNAPC4Q5SXM2 1469 aa8.17□□□□□ -1.1
LINC01517-204ENST00000621861 MED1Q15648 1581 aaPredicted RBP8.17□□□□□ -1.1
LINC01517-204ENST00000621861 PEG3Q9GZU2 1588 aa8.17□□□□□ -1.1
LINC01517-204ENST00000621861 ZNF219Q9P2Y4 722 aaPredicted RBP8.12□□□□□ -1.11
LINC01517-204ENST00000621861 MAPKBP1O60336 1514 aa8.12□□□□□ -1.11
LINC01517-204ENST00000621861 PTPRMP28827 1452 aa8.12□□□□□ -1.11
LINC01517-204ENST00000621861 TARBP1Q13395 1621 aaKnown RBP8.11□□□□□ -1.11
LINC01517-204ENST00000621861 TOPBP1Q92547 1522 aa8.11□□□□□ -1.11
LINC01517-204ENST00000621861 CFTRP13569 1480 aa8.1□□□□□ -1.11
LINC01517-204ENST00000621861 MROH2BQ7Z745 1585 aa8.09□□□□□ -1.11
LINC01517-204ENST00000621861 TDRD9Q8NDG6 1382 aaKnown RBP8.09□□□□□ -1.12
LINC01517-204ENST00000621861 COL17A1Q9UMD9 1497 aaPredicted RBP8.08□□□□□ -1.12
LINC01517-204ENST00000621861 KIF21BO75037 1637 aa8.07□□□□□ -1.12
LINC01517-204ENST00000621861 CEP170Q5SW79 1584 aa8.07□□□□□ -1.12
LINC01517-204ENST00000621861 PPRC1Q5VV67 1664 aaKnown RBP8.07□□□□□ -1.12
LINC01517-204ENST00000621861 MAGI1Q96QZ7 1491 aaPredicted RBP8.05□□□□□ -1.12
LINC01517-204ENST00000621861 PRDM2Q13029 1718 aa8.04□□□□□ -1.12
LINC01517-204ENST00000621861 UBAP1LF5GYI3 381 aa8.04□□□□□ -1.12
LINC01517-204ENST00000621861 SLC24A1O60721 1099 aa8.02□□□□□ -1.13
LINC01517-204ENST00000621861 ABCC8Q09428 1581 aa8.01□□□□□ -1.13
LINC01517-204ENST00000621861 CHRDL2Q6WN34 429 aa8□□□□□ -1.13
LINC01517-204ENST00000621861 RAD54L2Q9Y4B4 1467 aa8□□□□□ -1.13
LINC01517-204ENST00000621861 ADAMTSL3P82987 1691 aa7.99□□□□□ -1.13
LINC01517-204ENST00000621861 HSPA1LP34931 641 aa7.99□□□□□ -1.13
LINC01517-204ENST00000621861 APLP2Q06481 763 aa7.99□□□□□ -1.13
LINC01517-204ENST00000621861 RTN4Q9NQC3 1192 aaKnown RBP7.99□□□□□ -1.13
LINC01517-204ENST00000621861 AMER1Q5JTC6 1135 aaPredicted RBP7.98□□□□□ -1.13
LINC01517-204ENST00000621861 ADCY10Q96PN6 1610 aa7.98□□□□□ -1.13
LINC01517-204ENST00000621861 SRCAPQ6ZRS2 3230 aa7.98□□□□□ -1.13
LINC01517-204ENST00000621861 DNMBPQ6XZF7 1577 aa7.97□□□□□ -1.13
LINC01517-204ENST00000621861 GRIN2BQ13224 1484 aa7.96□□□□□ -1.13
LINC01517-204ENST00000621861 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.96□□□□□ -1.14
LINC01517-204ENST00000621861 HNRNPUL2Q1KMD3 747 aaKnown RBP7.96□□□□□ -1.14
LINC01517-204ENST00000621861 SAMD1Q6SPF0 538 aaPredicted RBP7.96□□□□□ -1.14
LINC01517-204ENST00000621861 MADDQ8WXG6 1647 aa7.96□□□□□ -1.14
LINC01517-204ENST00000621861 RBM42Q9BTD8 480 aaKnown RBP7.95□□□□□ -1.14
LINC01517-204ENST00000621861 RIMS1Q86UR5 1692 aaKnown RBP7.95□□□□□ -1.14
LINC01517-204ENST00000621861 POLA1P09884 1462 aaPredicted RBP7.94□□□□□ -1.14
LINC01517-204ENST00000621861 IQSEC2Q5JU85 1478 aa7.94□□□□□ -1.14
LINC01517-204ENST00000621861 SHROOM2Q13796 1616 aa7.94□□□□□ -1.14
LINC01517-204ENST00000621861 SETD1AO15047 1707 aaKnown RBP7.94□□□□□ -1.14
LINC01517-204ENST00000621861 SOGA1O94964 1423 aa7.94□□□□□ -1.14
LINC01517-204ENST00000621861 PRG4Q92954 1404 aaPredicted RBP7.94□□□□□ -1.14
LINC01517-204ENST00000621861 TEX14Q8IWB6 1497 aa7.94□□□□□ -1.14
LINC01517-204ENST00000621861 LTBP4Q8N2S1 1624 aa7.93□□□□□ -1.14
LINC01517-204ENST00000621861 PBRM1Q86U86 1689 aa7.93□□□□□ -1.14
LINC01517-204ENST00000621861 PIP4K2BP78356 416 aa7.93□□□□□ -1.14
LINC01517-204ENST00000621861 POLA2Q14181 598 aa7.93□□□□□ -1.14
LINC01517-204ENST00000621861 ARID4BQ4LE39 1312 aaPredicted RBP7.93□□□□□ -1.14
LINC01517-204ENST00000621861 STRCQ7RTU9 1775 aa7.92□□□□□ -1.14
LINC01517-204ENST00000621861 PTPRTO14522 1441 aa7.91□□□□□ -1.14
LINC01517-204ENST00000621861 CFAP43Q8NDM7 1665 aa7.91□□□□□ -1.14
LINC01517-204ENST00000621861 GLI2P10070 1586 aa7.9□□□□□ -1.14
LINC01517-204ENST00000621861 YEATS2Q9ULM3 1422 aa7.9□□□□□ -1.14
LINC01517-204ENST00000621861 WIZO95785 1651 aa7.89□□□□□ -1.15
LINC01517-204ENST00000621861 WDR97A6NE52 1622 aa7.89□□□□□ -1.15
LINC01517-204ENST00000621861 RGS17Q9UGC6 210 aaPredicted RBP7.89□□□□□ -1.15
LINC01517-204ENST00000621861 BCORL1Q5H9F3 1711 aa7.89□□□□□ -1.15
LINC01517-204ENST00000621861 ATF5Q9Y2D1 282 aaPredicted RBP7.88□□□□□ -1.15
LINC01517-204ENST00000621861 MAP3K4Q9Y6R4 1608 aa7.86□□□□□ -1.15
LINC01517-204ENST00000621861 UPF1Q92900 1129 aaKnown RBP eCLIP7.86□□□□□ -1.15
LINC01517-204ENST00000621861 GRIN2AQ12879 1464 aa7.86□□□□□ -1.15
LINC01517-204ENST00000621861 TTBK1Q5TCY1 1321 aaPredicted RBP7.85□□□□□ -1.15
LINC01517-204ENST00000621861 MYCNP04198 464 aaPredicted RBP7.85□□□□□ -1.15
LINC01517-204ENST00000621861 SP7Q8TDD2 431 aaPredicted RBP7.85□□□□□ -1.15
LINC01517-204ENST00000621861 ATXN8OSP0DMR3 200 aa7.84□□□□□ -1.15
LINC01517-204ENST00000621861 POTEAQ6S8J7 498 aa7.84□□□□□ -1.15
LINC01517-204ENST00000621861 RBM33Q96EV2 1170 aaKnown RBP7.84□□□□□ -1.15
LINC01517-204ENST00000621861 JPH4Q96JJ6 628 aa7.84□□□□□ -1.15
LINC01517-204ENST00000621861 ASXL2Q76L83 1435 aa7.84□□□□□ -1.15
LINC01517-204ENST00000621861 PLB1Q6P1J6 1458 aa7.83□□□□□ -1.16
LINC01517-204ENST00000621861 FKBP8Q14318 412 aa7.83□□□□□ -1.16
LINC01517-204ENST00000621861 PREX1Q8TCU6 1659 aa7.82□□□□□ -1.16
LINC01517-204ENST00000621861 NUP160Q12769 1436 aa7.81□□□□□ -1.16
LINC01517-204ENST00000621861 CUL7Q14999 1698 aa7.8□□□□□ -1.16
LINC01517-204ENST00000621861 KIAA0586Q9BVV6 1533 aa7.8□□□□□ -1.16
LINC01517-204ENST00000621861 PIP4P2Q8N4L2 257 aa7.79□□□□□ -1.16
LINC01517-204ENST00000621861 TOM1O60784 492 aa7.78□□□□□ -1.16
LINC01517-204ENST00000621861 AKT1S1Q96B36 256 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms