RNA–Protein interactions for RNA: ENST00000621323.4

PDE4D-227, Transcript of phosphodiesterase 4D, humanhuman

TSL 3

Gene PDE4D, Length 709 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-227ENST00000621323 RAD54L2Q9Y4B4 1467 aa12.45□□□□□ -0.42
PDE4D-227ENST00000621323 TDRD9Q8NDG6 1382 aaKnown RBP12.44□□□□□ -0.42
PDE4D-227ENST00000621323 KDM4FA0A1W2PPD8 638 aa12.44□□□□□ -0.42
PDE4D-227ENST00000621323 MAGI1Q96QZ7 1491 aaPredicted RBP12.41□□□□□ -0.42
PDE4D-227ENST00000621323 ERCC6L2Q5T890 1561 aa12.41□□□□□ -0.42
PDE4D-227ENST00000621323 CCDC88BA6NC98 1476 aa12.4□□□□□ -0.42
PDE4D-227ENST00000621323 CHMP7Q8WUX9 453 aaPredicted RBP12.39□□□□□ -0.43
PDE4D-227ENST00000621323 SYNJ2O15056 1496 aa12.39□□□□□ -0.43
PDE4D-227ENST00000621323 KIF13AQ9H1H9 1805 aa12.38□□□□□ -0.43
PDE4D-227ENST00000621323 WDR97A6NE52 1622 aa12.36□□□□□ -0.43
PDE4D-227ENST00000621323 ZBTB22O15209 634 aa12.35□□□□□ -0.43
PDE4D-227ENST00000621323 SOGA1O94964 1423 aa12.35□□□□□ -0.43
PDE4D-227ENST00000621323 GRIN2BQ13224 1484 aa12.34□□□□□ -0.43
PDE4D-227ENST00000621323 FOXD4L1Q9NU39 408 aa12.32□□□□□ -0.44
PDE4D-227ENST00000621323 FGD5Q6ZNL6 1462 aa12.3□□□□□ -0.44
PDE4D-227ENST00000621323 CEP170Q5SW79 1584 aa12.27□□□□□ -0.44
PDE4D-227ENST00000621323 ABCC10Q5T3U5 1492 aa12.25□□□□□ -0.45
PDE4D-227ENST00000621323 PBRM1Q86U86 1689 aa12.23□□□□□ -0.45
PDE4D-227ENST00000621323 KDM6BO15054 1643 aa12.22□□□□□ -0.45
PDE4D-227ENST00000621323 HECW2Q9P2P5 1572 aa12.22□□□□□ -0.45
PDE4D-227ENST00000621323 NUP160Q12769 1436 aa12.22□□□□□ -0.45
PDE4D-227ENST00000621323 SHROOM2Q13796 1616 aa12.22□□□□□ -0.45
PDE4D-227ENST00000621323 DIP2BQ9P265 1576 aa12.22□□□□□ -0.45
PDE4D-227ENST00000621323 CUX1P39880 1505 aa12.21□□□□□ -0.45
PDE4D-227ENST00000621323 FAM69CQ0P6D2 419 aa12.21□□□□□ -0.45
PDE4D-227ENST00000621323 GRIN2AQ12879 1464 aa12.21□□□□□ -0.46
PDE4D-227ENST00000621323 ADGRL1O94910 1474 aa12.18□□□□□ -0.46
PDE4D-227ENST00000621323 ABCA5Q8WWZ7 1642 aa12.18□□□□□ -0.46
PDE4D-227ENST00000621323 MAPKBP1O60336 1514 aa12.17□□□□□ -0.46
PDE4D-227ENST00000621323 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.17□□□□□ -0.46
PDE4D-227ENST00000621323 ADAMTS12P58397 1594 aa12.14□□□□□ -0.47
PDE4D-227ENST00000621323 FBXO41Q8TF61 875 aa12.13□□□□□ -0.47
PDE4D-227ENST00000621323 ABCA10Q8WWZ4 1543 aa12.12□□□□□ -0.47
PDE4D-227ENST00000621323 PRG4Q92954 1404 aaPredicted RBP12.1□□□□□ -0.47
PDE4D-227ENST00000621323 ADCY10Q96PN6 1610 aa12.09□□□□□ -0.47
PDE4D-227ENST00000621323 TSPOAP1O95153 1857 aa12.06□□□□□ -0.48
PDE4D-227ENST00000621323 DSG3P32926 999 aa12.06□□□□□ -0.48
PDE4D-227ENST00000621323 FHAD1B1AJZ9 1412 aa12.03□□□□□ -0.48
PDE4D-227ENST00000621323 PPRC1Q5VV67 1664 aaKnown RBP12.03□□□□□ -0.48
PDE4D-227ENST00000621323 LMTK3Q96Q04 1460 aa12.02□□□□□ -0.48
PDE4D-227ENST00000621323 COL17A1Q9UMD9 1497 aaPredicted RBP12.02□□□□□ -0.49
PDE4D-227ENST00000621323 NPM1P06748 294 aaKnown RBP eCLIP11.99□□□□□ -0.49
PDE4D-227ENST00000621323 JPH4Q96JJ6 628 aa11.99□□□□□ -0.49
PDE4D-227ENST00000621323 RUSC2Q8N2Y8 1516 aa11.99□□□□□ -0.49
PDE4D-227ENST00000621323 CAPN15O75808 1086 aa11.97□□□□□ -0.49
PDE4D-227ENST00000621323 SPINK5Q9NQ38 1064 aaPredicted RBP11.97□□□□□ -0.49
PDE4D-227ENST00000621323 ILDR2Q71H61 639 aa11.94□□□□□ -0.5
PDE4D-227ENST00000621323 ERICH3Q5RHP9 1530 aa11.93□□□□□ -0.5
PDE4D-227ENST00000621323 GLI2P10070 1586 aa11.92□□□□□ -0.5
PDE4D-227ENST00000621323 SOCS7O14512 581 aa11.92□□□□□ -0.5
PDE4D-227ENST00000621323 SLC4A2P04920 1241 aa11.92□□□□□ -0.5
PDE4D-227ENST00000621323 MYCNP04198 464 aaPredicted RBP11.91□□□□□ -0.5
PDE4D-227ENST00000621323 WRNQ14191 1432 aaPredicted RBP eCLIP11.9□□□□□ -0.5
PDE4D-227ENST00000621323 ASXL2Q76L83 1435 aa11.89□□□□□ -0.51
PDE4D-227ENST00000621323 TOP2BQ02880 1626 aa11.87□□□□□ -0.51
PDE4D-227ENST00000621323 ABCC2Q92887 1545 aa11.86□□□□□ -0.51
PDE4D-227ENST00000621323 PLB1Q6P1J6 1458 aa11.85□□□□□ -0.51
PDE4D-227ENST00000621323 MAP3K4Q9Y6R4 1608 aa11.84□□□□□ -0.51
PDE4D-227ENST00000621323 U3KPZ7 1027 aaPredicted RBP11.83□□□□□ -0.52
PDE4D-227ENST00000621323 EPRSP07814 1512 aaKnown RBP11.82□□□□□ -0.52
PDE4D-227ENST00000621323 BIVM-ERCC5R4GMW8 1640 aa11.81□□□□□ -0.52
PDE4D-227ENST00000621323 KIAA0586Q9BVV6 1533 aa11.81□□□□□ -0.52
PDE4D-227ENST00000621323 DISP3Q9P2K9 1392 aa11.8□□□□□ -0.52
PDE4D-227ENST00000621323 TEX14Q8IWB6 1497 aa11.8□□□□□ -0.52
PDE4D-227ENST00000621323 PTPRGP23470 1445 aa11.79□□□□□ -0.52
PDE4D-227ENST00000621323 ATXN8OSP0DMR3 200 aa11.77□□□□□ -0.53
PDE4D-227ENST00000621323 KIF21BO75037 1637 aa11.77□□□□□ -0.53
PDE4D-227ENST00000621323 CUL7Q14999 1698 aa11.77□□□□□ -0.53
PDE4D-227ENST00000621323 UHRF1BP1LA0JNW5 1464 aa11.76□□□□□ -0.53
PDE4D-227ENST00000621323 PTPRMP28827 1452 aa11.76□□□□□ -0.53
PDE4D-227ENST00000621323 PCF11O94913 1555 aaKnown RBP11.76□□□□□ -0.53
PDE4D-227ENST00000621323 KDM5BQ9UGL1 1544 aa11.73□□□□□ -0.53
PDE4D-227ENST00000621323 TNIKQ9UKE5 1360 aa11.73□□□□□ -0.53
PDE4D-227ENST00000621323 ADAMTSL3P82987 1691 aa11.72□□□□□ -0.53
PDE4D-227ENST00000621323 TTBK1Q5TCY1 1321 aaPredicted RBP11.72□□□□□ -0.53
PDE4D-227ENST00000621323 SPATA31D1Q6ZQQ2 1576 aa11.71□□□□□ -0.53
PDE4D-227ENST00000621323 UACAQ9BZF9 1416 aa11.7□□□□□ -0.54
PDE4D-227ENST00000621323 CERKQ8TCT0 537 aa11.69□□□□□ -0.54
PDE4D-227ENST00000621323 SP7Q8TDD2 431 aaPredicted RBP11.69□□□□□ -0.54
PDE4D-227ENST00000621323 ZCCHC11Q5TAX3 1644 aaKnown RBP11.68□□□□□ -0.54
PDE4D-227ENST00000621323 MAGI3Q5TCQ9 1506 aa11.68□□□□□ -0.54
PDE4D-227ENST00000621323 WDR7Q9Y4E6 1490 aa11.66□□□□□ -0.54
PDE4D-227ENST00000621323 ABCB7O75027 752 aa11.66□□□□□ -0.54
PDE4D-227ENST00000621323 IGF1RP08069 1367 aa11.65□□□□□ -0.55
PDE4D-227ENST00000621323 DISP1Q96F81 1524 aa11.65□□□□□ -0.55
PDE4D-227ENST00000621323 CARMIL2Q6F5E8 1435 aa11.64□□□□□ -0.55
PDE4D-227ENST00000621323 CHRDL2Q6WN34 429 aa11.64□□□□□ -0.55
PDE4D-227ENST00000621323 MADDQ8WXG6 1647 aa11.64□□□□□ -0.55
PDE4D-227ENST00000621323 CD109Q6YHK3 1445 aa11.63□□□□□ -0.55
PDE4D-227ENST00000621323 HSPA2P54652 639 aa11.63□□□□□ -0.55
PDE4D-227ENST00000621323 FKBP8Q14318 412 aa11.63□□□□□ -0.55
PDE4D-227ENST00000621323 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.62□□□□□ -0.55
PDE4D-227ENST00000621323 HNRNPUL2Q1KMD3 747 aaKnown RBP11.62□□□□□ -0.55
PDE4D-227ENST00000621323 BCORL1Q5H9F3 1711 aa11.61□□□□□ -0.55
PDE4D-227ENST00000621323 ARAP3Q8WWN8 1544 aa11.6□□□□□ -0.55
PDE4D-227ENST00000621323 CFAP43Q8NDM7 1665 aa11.6□□□□□ -0.55
PDE4D-227ENST00000621323 IQGAP2Q13576 1575 aa11.59□□□□□ -0.55
PDE4D-227ENST00000621323 SAMD1Q6SPF0 538 aaPredicted RBP11.58□□□□□ -0.56
PDE4D-227ENST00000621323 RIMS1Q86UR5 1692 aaKnown RBP11.54□□□□□ -0.56
PDE4D-227ENST00000621323 FRMPD1Q5SYB0 1578 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms