RNA–Protein interactions for RNA: ENST00000619707.4

C9orf72-206, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-206ENST00000619707 RBM19Q9Y4C8 960 aaKnown RBP12.31□□□□□ -0.44
C9orf72-206ENST00000619707 KIF27Q86VH2 1401 aa12.27□□□□□ -0.44
C9orf72-206ENST00000619707 ARHGAP35Q9NRY4 1499 aa12.27□□□□□ -0.45
C9orf72-206ENST00000619707 WDR97A6NE52 1622 aa12.27□□□□□ -0.45
C9orf72-206ENST00000619707 SETD5Q9C0A6 1442 aa12.27□□□□□ -0.45
C9orf72-206ENST00000619707 CCER2I3L3R5 266 aa12.25□□□□□ -0.45
C9orf72-206ENST00000619707 PPP1R15AO75807 674 aaPredicted RBP12.25□□□□□ -0.45
C9orf72-206ENST00000619707 ANP32CO43423 234 aa12.24□□□□□ -0.45
C9orf72-206ENST00000619707 TRIM52Q96A61 297 aa12.24□□□□□ -0.45
C9orf72-206ENST00000619707 SIN3AQ96ST3 1273 aa12.24□□□□□ -0.45
C9orf72-206ENST00000619707 PLPPR3Q6T4P5 718 aa12.22□□□□□ -0.45
C9orf72-206ENST00000619707 TIMELESSQ9UNS1 1208 aa12.22□□□□□ -0.45
C9orf72-206ENST00000619707 TIAM1Q13009 1591 aa12.21□□□□□ -0.45
C9orf72-206ENST00000619707 CUX1P39880 1505 aa12.21□□□□□ -0.46
C9orf72-206ENST00000619707 MAP3K1Q13233 1512 aa12.2□□□□□ -0.46
C9orf72-206ENST00000619707 FAM50AQ14320 339 aaKnown RBP12.19□□□□□ -0.46
C9orf72-206ENST00000619707 HIRIP3Q9BW71 556 aaPredicted RBP12.19□□□□□ -0.46
C9orf72-206ENST00000619707 LRRC9Q6ZRR7 1453 aa12.17□□□□□ -0.46
C9orf72-206ENST00000619707 PHLDB1Q86UU1 1377 aa12.16□□□□□ -0.46
C9orf72-206ENST00000619707 MSH5O43196 834 aa12.14□□□□□ -0.47
C9orf72-206ENST00000619707 CDK11AQ9UQ88 783 aaPredicted RBP12.13□□□□□ -0.47
C9orf72-206ENST00000619707 FANCIQ9NVI1 1328 aa12.13□□□□□ -0.47
C9orf72-206ENST00000619707 TONSLQ96HA7 1378 aa12.11□□□□□ -0.47
C9orf72-206ENST00000619707 FHAD1B1AJZ9 1412 aa12.1□□□□□ -0.47
C9orf72-206ENST00000619707 HNRNPUQ00839 825 aaKnown RBP eCLIP12.09□□□□□ -0.47
C9orf72-206ENST00000619707 CFAP43Q8NDM7 1665 aa12.08□□□□□ -0.47
C9orf72-206ENST00000619707 IGF1RP08069 1367 aa12.08□□□□□ -0.48
C9orf72-206ENST00000619707 ATP1B4Q9UN42 357 aaPredicted RBP12.08□□□□□ -0.48
C9orf72-206ENST00000619707 IRX6P78412 446 aaPredicted RBP12.06□□□□□ -0.48
C9orf72-206ENST00000619707 HMGXB3Q12766 1538 aa12.06□□□□□ -0.48
C9orf72-206ENST00000619707 CARMIL1Q5VZK9 1371 aa12.06□□□□□ -0.48
C9orf72-206ENST00000619707 PCF11O94913 1555 aaKnown RBP12.05□□□□□ -0.48
C9orf72-206ENST00000619707 CFTRP13569 1480 aa12.05□□□□□ -0.48
C9orf72-206ENST00000619707 RTN4Q9NQC3 1192 aaKnown RBP12.04□□□□□ -0.48
C9orf72-206ENST00000619707 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.04□□□□□ -0.48
C9orf72-206ENST00000619707 NCAPD3P42695 1498 aa12.04□□□□□ -0.48
C9orf72-206ENST00000619707 ERICH6BQ5W0A0 696 aa12.03□□□□□ -0.48
C9orf72-206ENST00000619707 P3H3Q8IVL6 736 aa12.03□□□□□ -0.48
C9orf72-206ENST00000619707 MYT1LQ9UL68 1186 aa12.03□□□□□ -0.48
C9orf72-206ENST00000619707 CCDC18Q5T9S5 1454 aa12.01□□□□□ -0.49
C9orf72-206ENST00000619707 PPP4R2Q9NY27 417 aa12.01□□□□□ -0.49
C9orf72-206ENST00000619707 UACAQ9BZF9 1416 aa11.99□□□□□ -0.49
C9orf72-206ENST00000619707 FYCO1Q9BQS8 1478 aa11.99□□□□□ -0.49
C9orf72-206ENST00000619707 NCBP3Q53F19 620 aaKnown RBP11.98□□□□□ -0.49
C9orf72-206ENST00000619707 FGD6Q6ZV73 1430 aa11.98□□□□□ -0.49
C9orf72-206ENST00000619707 FHOD3Q2V2M9 1422 aa11.97□□□□□ -0.49
C9orf72-206ENST00000619707 KLHL34Q8N239 644 aa11.97□□□□□ -0.49
C9orf72-206ENST00000619707 HFM1A2PYH4 1435 aa11.96□□□□□ -0.49
C9orf72-206ENST00000619707 CASKIN1Q8WXD9 1431 aa11.96□□□□□ -0.49
C9orf72-206ENST00000619707 FGD5Q6ZNL6 1462 aa11.96□□□□□ -0.49
C9orf72-206ENST00000619707 PRDM2Q13029 1718 aa11.96□□□□□ -0.5
C9orf72-206ENST00000619707 PODXL2Q9NZ53 605 aa11.96□□□□□ -0.5
C9orf72-206ENST00000619707 PTPN23Q9H3S7 1636 aa11.95□□□□□ -0.5
C9orf72-206ENST00000619707 WASHC2AQ641Q2 1341 aa11.94□□□□□ -0.5
C9orf72-206ENST00000619707 AQRO60306 1485 aaKnown RBP eCLIP11.94□□□□□ -0.5
C9orf72-206ENST00000619707 EFCAB5A4FU69 1503 aa11.94□□□□□ -0.5
C9orf72-206ENST00000619707 HSPA5P11021 654 aaKnown RBP11.93□□□□□ -0.5
C9orf72-206ENST00000619707 DEKP35659 375 aaKnown RBP11.93□□□□□ -0.5
C9orf72-206ENST00000619707 AEBP2Q6ZN18 517 aaPredicted RBP11.93□□□□□ -0.5
C9orf72-206ENST00000619707 MTUS2Q5JR59 1369 aa11.92□□□□□ -0.5
C9orf72-206ENST00000619707 B4GALNT3Q6L9W6 998 aa11.91□□□□□ -0.5
C9orf72-206ENST00000619707 KDM5BQ9UGL1 1544 aa11.91□□□□□ -0.5
C9orf72-206ENST00000619707 PTPRKQ15262 1439 aa11.91□□□□□ -0.5
C9orf72-206ENST00000619707 NAIPQ13075 1403 aa11.91□□□□□ -0.5
C9orf72-206ENST00000619707 EIF4G2P78344 907 aaKnown RBP eCLIP11.91□□□□□ -0.5
C9orf72-206ENST00000619707 CNTLNQ9NXG0 1405 aa11.91□□□□□ -0.5
C9orf72-206ENST00000619707 FMN1Q68DA7 1419 aa11.9□□□□□ -0.51
C9orf72-206ENST00000619707 FAM9BQ8IZU0 186 aa11.89□□□□□ -0.51
C9orf72-206ENST00000619707 NCOA2Q15596 1464 aa11.89□□□□□ -0.51
C9orf72-206ENST00000619707 NOP58Q9Y2X3 529 aaKnown RBP11.89□□□□□ -0.51
C9orf72-206ENST00000619707 ZBED9Q6R2W3 1325 aa11.89□□□□□ -0.51
C9orf72-206ENST00000619707 CCDC184Q52MB2 194 aa11.88□□□□□ -0.51
C9orf72-206ENST00000619707 MRS2Q9HD23 443 aa11.88□□□□□ -0.51
C9orf72-206ENST00000619707 PRKRIP1Q9H875 184 aaPredicted RBP11.86□□□□□ -0.51
C9orf72-206ENST00000619707 MYOM3Q5VTT5 1437 aa11.86□□□□□ -0.51
C9orf72-206ENST00000619707 CADPSQ9ULU8 1353 aa11.86□□□□□ -0.51
C9orf72-206ENST00000619707 SNAPC4Q5SXM2 1469 aa11.84□□□□□ -0.51
C9orf72-206ENST00000619707 NBR1Q14596 966 aa11.84□□□□□ -0.51
C9orf72-206ENST00000619707 CTTNBP2Q8WZ74 1663 aa11.84□□□□□ -0.51
C9orf72-206ENST00000619707 CCDC7Q96M83 1385 aa11.83□□□□□ -0.52
C9orf72-206ENST00000619707 NCOA1Q15788 1441 aa11.82□□□□□ -0.52
C9orf72-206ENST00000619707 RRP7BPQ9NSQ0 103 aa11.82□□□□□ -0.52
C9orf72-206ENST00000619707 SUPT6HQ7KZ85 1726 aaKnown RBP11.82□□□□□ -0.52
C9orf72-206ENST00000619707 HECW1Q76N89 1606 aa11.81□□□□□ -0.52
C9orf72-206ENST00000619707 CC2D2AQ9P2K1 1620 aa11.81□□□□□ -0.52
C9orf72-206ENST00000619707 CUL7Q14999 1698 aa11.81□□□□□ -0.52
C9orf72-206ENST00000619707 PAK3O75914 559 aaPredicted RBP11.81□□□□□ -0.52
C9orf72-206ENST00000619707 ANP32AP39687 249 aaKnown RBP11.81□□□□□ -0.52
C9orf72-206ENST00000619707 C11orf95C9JLR9 678 aaPredicted RBP11.8□□□□□ -0.52
C9orf72-206ENST00000619707 CHIC2Q9UKJ5 165 aa11.8□□□□□ -0.52
C9orf72-206ENST00000619707 L3MBTL2Q969R5 705 aa11.8□□□□□ -0.52
C9orf72-206ENST00000619707 EHBP1L1Q8N3D4 1523 aa11.79□□□□□ -0.52
C9orf72-206ENST00000619707 ABCA10Q8WWZ4 1543 aa11.79□□□□□ -0.52
C9orf72-206ENST00000619707 RAD54L2Q9Y4B4 1467 aa11.79□□□□□ -0.52
C9orf72-206ENST00000619707 RTL5Q5HYW3 569 aaPredicted RBP11.78□□□□□ -0.52
C9orf72-206ENST00000619707 GCC2Q8IWJ2 1684 aa11.78□□□□□ -0.52
C9orf72-206ENST00000619707 CCDC136Q96JN2 1154 aa11.78□□□□□ -0.52
C9orf72-206ENST00000619707 DENND4BO75064 1496 aaPredicted RBP11.78□□□□□ -0.52
C9orf72-206ENST00000619707 SMG6Q86US8 1419 aaKnown RBP11.77□□□□□ -0.53
C9orf72-206ENST00000619707 LRRIQ1Q96JM4 1722 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms