RNA–Protein interactions for RNA: ENST00000619138.4

CNTNAP3B-215, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 3,840 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-215ENST00000619138 CLIP1P30622 1438 aa19.81■□□□□ 0.76
CNTNAP3B-215ENST00000619138 CARMIL1Q5VZK9 1371 aa19.81■□□□□ 0.76
CNTNAP3B-215ENST00000619138 DNMBPQ6XZF7 1577 aa19.8■□□□□ 0.76
CNTNAP3B-215ENST00000619138 FKBP8Q14318 412 aa19.79■□□□□ 0.76
CNTNAP3B-215ENST00000619138 IGF1RP08069 1367 aa19.79■□□□□ 0.76
CNTNAP3B-215ENST00000619138 FBLN2P98095 1184 aa19.78■□□□□ 0.76
CNTNAP3B-215ENST00000619138 KIF21AQ7Z4S6 1674 aa19.77■□□□□ 0.76
CNTNAP3B-215ENST00000619138 KCNH8Q96L42 1107 aa19.76■□□□□ 0.75
CNTNAP3B-215ENST00000619138 NEFLP07196 543 aa19.7■□□□□ 0.74
CNTNAP3B-215ENST00000619138 KIF21BO75037 1637 aa19.69■□□□□ 0.74
CNTNAP3B-215ENST00000619138 MRC2Q9UBG0 1479 aa19.69■□□□□ 0.74
CNTNAP3B-215ENST00000619138 PRXQ9BXM0 1461 aa19.67■□□□□ 0.74
CNTNAP3B-215ENST00000619138 AQRO60306 1485 aaKnown RBP eCLIP19.67■□□□□ 0.74
CNTNAP3B-215ENST00000619138 HIRIP3Q9BW71 556 aaPredicted RBP19.64■□□□□ 0.74
CNTNAP3B-215ENST00000619138 TRIM52Q96A61 297 aa19.63■□□□□ 0.73
CNTNAP3B-215ENST00000619138 GAPVD1Q14C86 1478 aa19.63■□□□□ 0.73
CNTNAP3B-215ENST00000619138 ABCA10Q8WWZ4 1543 aa19.61■□□□□ 0.73
CNTNAP3B-215ENST00000619138 DDX10Q13206 875 aaKnown RBP19.59■□□□□ 0.73
CNTNAP3B-215ENST00000619138 IRX6P78412 446 aaPredicted RBP19.55■□□□□ 0.72
CNTNAP3B-215ENST00000619138 CHMP7Q8WUX9 453 aaPredicted RBP19.55■□□□□ 0.72
CNTNAP3B-215ENST00000619138 ERICH3Q5RHP9 1530 aa19.54■□□□□ 0.72
CNTNAP3B-215ENST00000619138 ARID3CA6NKF2 412 aa19.54■□□□□ 0.72
CNTNAP3B-215ENST00000619138 ZNF608Q9ULD9 1512 aaPredicted RBP19.52■□□□□ 0.72
CNTNAP3B-215ENST00000619138 VPS8Q8N3P4 1428 aa19.49■□□□□ 0.71
CNTNAP3B-215ENST00000619138 RBM19Q9Y4C8 960 aaKnown RBP19.48■□□□□ 0.71
CNTNAP3B-215ENST00000619138 CNGB1Q14028 1251 aaPredicted RBP19.46■□□□□ 0.71
CNTNAP3B-215ENST00000619138 IFT140Q96RY7 1462 aa19.43■□□□□ 0.7
CNTNAP3B-215ENST00000619138 ARAP1Q96P48 1450 aa19.42■□□□□ 0.7
CNTNAP3B-215ENST00000619138 CLSPNQ9HAW4 1339 aa19.42■□□□□ 0.7
CNTNAP3B-215ENST00000619138 KANK4Q5T7N3 995 aaPredicted RBP19.41■□□□□ 0.7
CNTNAP3B-215ENST00000619138 FHOD3Q2V2M9 1422 aa19.41■□□□□ 0.7
CNTNAP3B-215ENST00000619138 ARHGAP35Q9NRY4 1499 aa19.39■□□□□ 0.69
CNTNAP3B-215ENST00000619138 GRIN2BQ13224 1484 aa19.39■□□□□ 0.69
CNTNAP3B-215ENST00000619138 WDR62O43379 1518 aa19.38■□□□□ 0.69
CNTNAP3B-215ENST00000619138 TARBP1Q13395 1621 aaKnown RBP19.37■□□□□ 0.69
CNTNAP3B-215ENST00000619138 SNAPC4Q5SXM2 1469 aa19.34■□□□□ 0.69
CNTNAP3B-215ENST00000619138 FHAD1B1AJZ9 1412 aa19.34■□□□□ 0.69
CNTNAP3B-215ENST00000619138 ABCA5Q8WWZ7 1642 aa19.32■□□□□ 0.68
CNTNAP3B-215ENST00000619138 CUL7Q14999 1698 aa19.32■□□□□ 0.68
CNTNAP3B-215ENST00000619138 SIN3AQ96ST3 1273 aa19.3■□□□□ 0.68
CNTNAP3B-215ENST00000619138 FAM50AQ14320 339 aaKnown RBP19.28■□□□□ 0.68
CNTNAP3B-215ENST00000619138 WDR97A6NE52 1622 aa19.27■□□□□ 0.68
CNTNAP3B-215ENST00000619138 THOC2Q8NI27 1593 aaKnown RBP19.27■□□□□ 0.68
CNTNAP3B-215ENST00000619138 ANP32CO43423 234 aa19.26■□□□□ 0.67
CNTNAP3B-215ENST00000619138 NBR1Q14596 966 aa19.26■□□□□ 0.67
CNTNAP3B-215ENST00000619138 DHX57Q6P158 1386 aaKnown RBP19.26■□□□□ 0.67
CNTNAP3B-215ENST00000619138 CDK11AQ9UQ88 783 aaPredicted RBP19.24■□□□□ 0.67
CNTNAP3B-215ENST00000619138 EIF4G3O43432 1585 aaKnown RBP19.23■□□□□ 0.67
CNTNAP3B-215ENST00000619138 PBRM1Q86U86 1689 aa19.22■□□□□ 0.67
CNTNAP3B-215ENST00000619138 HNRNPUQ00839 825 aaKnown RBP eCLIP19.21■□□□□ 0.67
CNTNAP3B-215ENST00000619138 SENP3-EIF4A1A0A087X0R7 540 aa19.19■□□□□ 0.66
CNTNAP3B-215ENST00000619138 MSH5O43196 834 aa19.19■□□□□ 0.66
CNTNAP3B-215ENST00000619138 JPH4Q96JJ6 628 aa19.17■□□□□ 0.66
CNTNAP3B-215ENST00000619138 ADAMTS12P58397 1594 aa19.16■□□□□ 0.66
CNTNAP3B-215ENST00000619138 MTUS2Q5JR59 1369 aa19.15■□□□□ 0.66
CNTNAP3B-215ENST00000619138 FMN1Q68DA7 1419 aa19.14■□□□□ 0.65
CNTNAP3B-215ENST00000619138 GRIN2AQ12879 1464 aa19.14■□□□□ 0.65
CNTNAP3B-215ENST00000619138 CTTNBP2Q8WZ74 1663 aa19.12■□□□□ 0.65
CNTNAP3B-215ENST00000619138 SYNJ2O15056 1496 aa19.1■□□□□ 0.65
CNTNAP3B-215ENST00000619138 MAGI1Q96QZ7 1491 aaPredicted RBP19.09■□□□□ 0.65
CNTNAP3B-215ENST00000619138 IQGAP2Q13576 1575 aa19.09■□□□□ 0.65
CNTNAP3B-215ENST00000619138 EFCAB5A4FU69 1503 aa19.07■□□□□ 0.64
CNTNAP3B-215ENST00000619138 PCF11O94913 1555 aaKnown RBP19.06■□□□□ 0.64
CNTNAP3B-215ENST00000619138 KIAA0586Q9BVV6 1533 aa19.05■□□□□ 0.64
CNTNAP3B-215ENST00000619138 DEKP35659 375 aaKnown RBP19.05■□□□□ 0.64
CNTNAP3B-215ENST00000619138 B4GALNT3Q6L9W6 998 aa19.04■□□□□ 0.64
CNTNAP3B-215ENST00000619138 CASKIN1Q8WXD9 1431 aa19.02■□□□□ 0.64
CNTNAP3B-215ENST00000619138 POLR3GLQ9BT43 218 aa19.02■□□□□ 0.64
CNTNAP3B-215ENST00000619138 RTN4Q9NQC3 1192 aaKnown RBP19.02■□□□□ 0.64
CNTNAP3B-215ENST00000619138 FAM9BQ8IZU0 186 aa19.01■□□□□ 0.63
CNTNAP3B-215ENST00000619138 CARMIL2Q6F5E8 1435 aa19■□□□□ 0.63
CNTNAP3B-215ENST00000619138 CCNB3Q8WWL7 1395 aa19■□□□□ 0.63
CNTNAP3B-215ENST00000619138 LRRC9Q6ZRR7 1453 aa18.99■□□□□ 0.63
CNTNAP3B-215ENST00000619138 TIAM1Q13009 1591 aa18.98■□□□□ 0.63
CNTNAP3B-215ENST00000619138 ZNF777Q9ULD5 760 aaPredicted RBP18.98■□□□□ 0.63
CNTNAP3B-215ENST00000619138 FYCO1Q9BQS8 1478 aa18.97■□□□□ 0.63
CNTNAP3B-215ENST00000619138 PHLDB1Q86UU1 1377 aa18.96■□□□□ 0.63
CNTNAP3B-215ENST00000619138 EIF5BO60841 1220 aaKnown RBP18.95■□□□□ 0.62
CNTNAP3B-215ENST00000619138 RAB3GAP2Q9H2M9 1393 aa18.95■□□□□ 0.62
CNTNAP3B-215ENST00000619138 CHIC2Q9UKJ5 165 aa18.95■□□□□ 0.62
CNTNAP3B-215ENST00000619138 CEP170Q5SW79 1584 aa18.93■□□□□ 0.62
CNTNAP3B-215ENST00000619138 PRG4Q92954 1404 aaPredicted RBP18.93■□□□□ 0.62
CNTNAP3B-215ENST00000619138 RTL5Q5HYW3 569 aaPredicted RBP18.92■□□□□ 0.62
CNTNAP3B-215ENST00000619138 NPM2Q86SE8 214 aaKnown RBP18.92■□□□□ 0.62
CNTNAP3B-215ENST00000619138 CDK13Q14004 1512 aaKnown RBP18.9■□□□□ 0.62
CNTNAP3B-215ENST00000619138 SAMD9Q5K651 1589 aa18.89■□□□□ 0.61
CNTNAP3B-215ENST00000619138 PLEKHD1A6NEE1 506 aa18.88■□□□□ 0.61
CNTNAP3B-215ENST00000619138 PRKCSHP14314 528 aaPredicted RBP18.88■□□□□ 0.61
CNTNAP3B-215ENST00000619138 PTPRGP23470 1445 aa18.88■□□□□ 0.61
CNTNAP3B-215ENST00000619138 PLB1Q6P1J6 1458 aa18.88■□□□□ 0.61
CNTNAP3B-215ENST00000619138 DISP1Q96F81 1524 aa18.87■□□□□ 0.61
CNTNAP3B-215ENST00000619138 CCDC136Q96JN2 1154 aa18.87■□□□□ 0.61
CNTNAP3B-215ENST00000619138 NUP160Q12769 1436 aa18.86■□□□□ 0.61
CNTNAP3B-215ENST00000619138 UGGT2Q9NYU1 1516 aa18.86■□□□□ 0.61
CNTNAP3B-215ENST00000619138 ANO8Q9HCE9 1232 aaPredicted RBP18.86■□□□□ 0.61
CNTNAP3B-215ENST00000619138 PPP1R15AO75807 674 aaPredicted RBP18.85■□□□□ 0.61
CNTNAP3B-215ENST00000619138 TONSLQ96HA7 1378 aa18.84■□□□□ 0.61
CNTNAP3B-215ENST00000619138 KIAA0556O60303 1618 aa18.83■□□□□ 0.61
CNTNAP3B-215ENST00000619138 RRP7BPQ9NSQ0 103 aa18.83■□□□□ 0.6
CNTNAP3B-215ENST00000619138 EPRSP07814 1512 aaKnown RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms