RNA–Protein interactions for RNA: ENST00000618855.4

TMPRSS4-220, Transcript of transmembrane serine protease 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMPRSS4, Length 3,531 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPRSS4-220ENST00000618855 DEKP35659 375 aaKnown RBP13.27□□□□□ -0.29
TMPRSS4-220ENST00000618855 ZNF326Q5BKZ1 582 aaKnown RBP13.26□□□□□ -0.29
TMPRSS4-220ENST00000618855 VPS8Q8N3P4 1428 aa13.26□□□□□ -0.29
TMPRSS4-220ENST00000618855 SMARCA2P51531 1590 aa13.25□□□□□ -0.29
TMPRSS4-220ENST00000618855 CUX2O14529 1486 aa13.25□□□□□ -0.29
TMPRSS4-220ENST00000618855 RAPGEF2Q9Y4G8 1499 aa13.23□□□□□ -0.29
TMPRSS4-220ENST00000618855 BICRAQ9NZM4 1560 aa13.22□□□□□ -0.29
TMPRSS4-220ENST00000618855 CEP164Q9UPV0 1460 aa13.22□□□□□ -0.29
TMPRSS4-220ENST00000618855 SENP3Q9H4L4 574 aaPredicted RBP13.22□□□□□ -0.29
TMPRSS4-220ENST00000618855 NESP48681 1621 aa13.19□□□□□ -0.3
TMPRSS4-220ENST00000618855 CHMP7Q8WUX9 453 aaPredicted RBP13.19□□□□□ -0.3
TMPRSS4-220ENST00000618855 B4GALNT3Q6L9W6 998 aa13.18□□□□□ -0.3
TMPRSS4-220ENST00000618855 FAM9BQ8IZU0 186 aa13.18□□□□□ -0.3
TMPRSS4-220ENST00000618855 RRP7BPQ9NSQ0 103 aa13.18□□□□□ -0.3
TMPRSS4-220ENST00000618855 RTN4Q9NQC3 1192 aaKnown RBP13.17□□□□□ -0.3
TMPRSS4-220ENST00000618855 KIF27Q86VH2 1401 aa13.17□□□□□ -0.3
TMPRSS4-220ENST00000618855 SENP3-EIF4A1A0A087X0R7 540 aa13.17□□□□□ -0.3
TMPRSS4-220ENST00000618855 CARMIL1Q5VZK9 1371 aa13.14□□□□□ -0.31
TMPRSS4-220ENST00000618855 NPM2Q86SE8 214 aaKnown RBP13.14□□□□□ -0.31
TMPRSS4-220ENST00000618855 ANP32AP39687 249 aaKnown RBP13.13□□□□□ -0.31
TMPRSS4-220ENST00000618855 CADPSQ9ULU8 1353 aa13.13□□□□□ -0.31
TMPRSS4-220ENST00000618855 EIF4G1Q04637 1599 aaKnown RBP13.13□□□□□ -0.31
TMPRSS4-220ENST00000618855 CCER2I3L3R5 266 aa13.12□□□□□ -0.31
TMPRSS4-220ENST00000618855 CCNB3Q8WWL7 1395 aa13.12□□□□□ -0.31
TMPRSS4-220ENST00000618855 RAD54L2Q9Y4B4 1467 aa13.12□□□□□ -0.31
TMPRSS4-220ENST00000618855 CCDC136Q96JN2 1154 aa13.11□□□□□ -0.31
TMPRSS4-220ENST00000618855 FANCIQ9NVI1 1328 aa13.11□□□□□ -0.31
TMPRSS4-220ENST00000618855 TONSLQ96HA7 1378 aa13.11□□□□□ -0.31
TMPRSS4-220ENST00000618855 SALL2Q9Y467 1007 aaPredicted RBP13.11□□□□□ -0.31
TMPRSS4-220ENST00000618855 NOP58Q9Y2X3 529 aaKnown RBP13.1□□□□□ -0.31
TMPRSS4-220ENST00000618855 RAB3GAP2Q9H2M9 1393 aa13.1□□□□□ -0.31
TMPRSS4-220ENST00000618855 PPP4R2Q9NY27 417 aa13.1□□□□□ -0.31
TMPRSS4-220ENST00000618855 UNC13AQ9UPW8 1703 aa13.08□□□□□ -0.31
TMPRSS4-220ENST00000618855 ZBTB47Q9UFB7 747 aaPredicted RBP13.08□□□□□ -0.32
TMPRSS4-220ENST00000618855 SYNJ1O43426 1573 aa13.07□□□□□ -0.32
TMPRSS4-220ENST00000618855 MTUS2Q5JR59 1369 aa13.06□□□□□ -0.32
TMPRSS4-220ENST00000618855 EIF5BO60841 1220 aaKnown RBP13.06□□□□□ -0.32
TMPRSS4-220ENST00000618855 FOXD1Q16676 465 aa13.05□□□□□ -0.32
TMPRSS4-220ENST00000618855 PPP1R15AO75807 674 aaPredicted RBP13.05□□□□□ -0.32
TMPRSS4-220ENST00000618855 MRS2Q9HD23 443 aa13.05□□□□□ -0.32
TMPRSS4-220ENST00000618855 ERCC6Q03468 1493 aa13.04□□□□□ -0.32
TMPRSS4-220ENST00000618855 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.02□□□□□ -0.32
TMPRSS4-220ENST00000618855 FHOD3Q2V2M9 1422 aa13.02□□□□□ -0.32
TMPRSS4-220ENST00000618855 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.01□□□□□ -0.33
TMPRSS4-220ENST00000618855 FANCD2Q9BXW9 1451 aa13□□□□□ -0.33
TMPRSS4-220ENST00000618855 PAK3O75914 559 aaPredicted RBP12.99□□□□□ -0.33
TMPRSS4-220ENST00000618855 PLPPR3Q6T4P5 718 aa12.99□□□□□ -0.33
TMPRSS4-220ENST00000618855 LAS1LQ9Y4W2 734 aaKnown RBP12.98□□□□□ -0.33
TMPRSS4-220ENST00000618855 KIF21BO75037 1637 aa12.98□□□□□ -0.33
TMPRSS4-220ENST00000618855 IGF1RP08069 1367 aa12.98□□□□□ -0.33
TMPRSS4-220ENST00000618855 SETD5Q9C0A6 1442 aa12.98□□□□□ -0.33
TMPRSS4-220ENST00000618855 NCAPD3P42695 1498 aa12.97□□□□□ -0.33
TMPRSS4-220ENST00000618855 DAXXQ9UER7 740 aaPredicted RBP12.97□□□□□ -0.33
TMPRSS4-220ENST00000618855 FGD5Q6ZNL6 1462 aa12.96□□□□□ -0.33
TMPRSS4-220ENST00000618855 KDM2AQ9Y2K7 1162 aa12.95□□□□□ -0.34
TMPRSS4-220ENST00000618855 CC2D2AQ9P2K1 1620 aa12.95□□□□□ -0.34
TMPRSS4-220ENST00000618855 IL27Q8NEV9 243 aa12.95□□□□□ -0.34
TMPRSS4-220ENST00000618855 AQRO60306 1485 aaKnown RBP eCLIP12.94□□□□□ -0.34
TMPRSS4-220ENST00000618855 NEFMP07197 916 aa12.92□□□□□ -0.34
TMPRSS4-220ENST00000618855 WDR97A6NE52 1622 aa12.92□□□□□ -0.34
TMPRSS4-220ENST00000618855 TIMELESSQ9UNS1 1208 aa12.91□□□□□ -0.34
TMPRSS4-220ENST00000618855 PDS5BQ9NTI5 1447 aa12.9□□□□□ -0.34
TMPRSS4-220ENST00000618855 EIF4G2P78344 907 aaKnown RBP eCLIP12.9□□□□□ -0.34
TMPRSS4-220ENST00000618855 SLC4A1APQ9BWU0 796 aaKnown RBP12.9□□□□□ -0.34
TMPRSS4-220ENST00000618855 CUX1P39880 1505 aa12.89□□□□□ -0.35
TMPRSS4-220ENST00000618855 ERICH6BQ5W0A0 696 aa12.89□□□□□ -0.35
TMPRSS4-220ENST00000618855 IPO9Q96P70 1041 aaKnown RBP12.89□□□□□ -0.35
TMPRSS4-220ENST00000618855 RGL3Q3MIN7 710 aa12.88□□□□□ -0.35
TMPRSS4-220ENST00000618855 HSPA5P11021 654 aaKnown RBP12.88□□□□□ -0.35
TMPRSS4-220ENST00000618855 RRBP1Q9P2E9 1410 aaKnown RBP12.86□□□□□ -0.35
TMPRSS4-220ENST00000618855 CCDC184Q52MB2 194 aa12.86□□□□□ -0.35
TMPRSS4-220ENST00000618855 CFTRP13569 1480 aa12.86□□□□□ -0.35
TMPRSS4-220ENST00000618855 ARAP1Q96P48 1450 aa12.85□□□□□ -0.35
TMPRSS4-220ENST00000618855 CFDP1Q9UEE9 299 aaPredicted RBP12.85□□□□□ -0.35
TMPRSS4-220ENST00000618855 ZNF644Q9H582 1327 aaPredicted RBP12.84□□□□□ -0.35
TMPRSS4-220ENST00000618855 CHGAP10645 457 aaKnown RBP12.82□□□□□ -0.36
TMPRSS4-220ENST00000618855 UBE2Q2Q8WVN8 375 aa12.82□□□□□ -0.36
TMPRSS4-220ENST00000618855 PLEKHD1A6NEE1 506 aa12.8□□□□□ -0.36
TMPRSS4-220ENST00000618855 TMC1Q8TDI8 760 aa12.8□□□□□ -0.36
TMPRSS4-220ENST00000618855 JPH4Q96JJ6 628 aa12.78□□□□□ -0.36
TMPRSS4-220ENST00000618855 PHLDB1Q86UU1 1377 aa12.77□□□□□ -0.36
TMPRSS4-220ENST00000618855 PRKRIP1Q9H875 184 aaPredicted RBP12.77□□□□□ -0.36
TMPRSS4-220ENST00000618855 WASHC2AQ641Q2 1341 aa12.77□□□□□ -0.37
TMPRSS4-220ENST00000618855 TSPY4P0CV99 314 aa12.76□□□□□ -0.37
TMPRSS4-220ENST00000618855 TSPY10P0CW01 314 aa12.76□□□□□ -0.37
TMPRSS4-220ENST00000618855 MAPKBP1O60336 1514 aa12.76□□□□□ -0.37
TMPRSS4-220ENST00000618855 POLA1P09884 1462 aaPredicted RBP12.75□□□□□ -0.37
TMPRSS4-220ENST00000618855 ZBED9Q6R2W3 1325 aa12.74□□□□□ -0.37
TMPRSS4-220ENST00000618855 HNRNPMP52272 730 aaKnown RBP eCLIP12.74□□□□□ -0.37
TMPRSS4-220ENST00000618855 PPM1GO15355 546 aaPredicted RBP12.74□□□□□ -0.37
TMPRSS4-220ENST00000618855 ARHGAP35Q9NRY4 1499 aa12.73□□□□□ -0.37
TMPRSS4-220ENST00000618855 GAPVD1Q14C86 1478 aa12.73□□□□□ -0.37
TMPRSS4-220ENST00000618855 ARXQ96QS3 562 aa12.73□□□□□ -0.37
TMPRSS4-220ENST00000618855 NUDCQ9Y266 331 aa12.71□□□□□ -0.37
TMPRSS4-220ENST00000618855 AKNAQ7Z591 1439 aa12.7□□□□□ -0.38
TMPRSS4-220ENST00000618855 TOPBP1Q92547 1522 aa12.7□□□□□ -0.38
TMPRSS4-220ENST00000618855 PRXQ9BXM0 1461 aa12.7□□□□□ -0.38
TMPRSS4-220ENST00000618855 BRPF3Q9ULD4 1205 aa12.7□□□□□ -0.38
TMPRSS4-220ENST00000618855 SLC4A3P48751 1232 aa12.7□□□□□ -0.38
TMPRSS4-220ENST00000618855 L3MBTL2Q969R5 705 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms