RNA–Protein interactions for RNA: ENST00000618829.4

SYNRG-224, Transcript of synergin gamma, humanhuman

TSL 2

Gene SYNRG, Length 3,649 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-224ENST00000618829 BCORL1Q5H9F3 1711 aa10.84□□□□□ -0.67
SYNRG-224ENST00000618829 EFCAB5A4FU69 1503 aa10.82□□□□□ -0.68
SYNRG-224ENST00000618829 AQRO60306 1485 aaKnown RBP eCLIP10.8□□□□□ -0.68
SYNRG-224ENST00000618829 RANGAP1P46060 587 aaPredicted RBP10.8□□□□□ -0.68
SYNRG-224ENST00000618829 SNAPC4Q5SXM2 1469 aa10.8□□□□□ -0.68
SYNRG-224ENST00000618829 TNIKQ9UKE5 1360 aa10.8□□□□□ -0.68
SYNRG-224ENST00000618829 IFT140Q96RY7 1462 aa10.78□□□□□ -0.68
SYNRG-224ENST00000618829 KDM5BQ9UGL1 1544 aa10.77□□□□□ -0.69
SYNRG-224ENST00000618829 IQGAP2Q13576 1575 aa10.77□□□□□ -0.69
SYNRG-224ENST00000618829 NUP160Q12769 1436 aa10.76□□□□□ -0.69
SYNRG-224ENST00000618829 KIAA0556O60303 1618 aa10.75□□□□□ -0.69
SYNRG-224ENST00000618829 PLPPR3Q6T4P5 718 aa10.75□□□□□ -0.69
SYNRG-224ENST00000618829 GOLGA3Q08378 1498 aa10.74□□□□□ -0.69
SYNRG-224ENST00000618829 ARAP1Q96P48 1450 aa10.74□□□□□ -0.69
SYNRG-224ENST00000618829 MAGI1Q96QZ7 1491 aaPredicted RBP10.73□□□□□ -0.69
SYNRG-224ENST00000618829 ABCA8O94911 1581 aa10.72□□□□□ -0.69
SYNRG-224ENST00000618829 HNRNPUL2Q1KMD3 747 aaKnown RBP10.71□□□□□ -0.69
SYNRG-224ENST00000618829 SCAF1Q9H7N4 1312 aaKnown RBP10.71□□□□□ -0.7
SYNRG-224ENST00000618829 APLP2Q06481 763 aa10.7□□□□□ -0.7
SYNRG-224ENST00000618829 DIEXFQ68CQ4 756 aaKnown RBP10.7□□□□□ -0.7
SYNRG-224ENST00000618829 PDS5BQ9NTI5 1447 aa10.67□□□□□ -0.7
SYNRG-224ENST00000618829 DISP1Q96F81 1524 aa10.67□□□□□ -0.7
SYNRG-224ENST00000618829 PPRC1Q5VV67 1664 aaKnown RBP10.66□□□□□ -0.7
SYNRG-224ENST00000618829 CLIP1P30622 1438 aa10.66□□□□□ -0.7
SYNRG-224ENST00000618829 GRIN2BQ13224 1484 aa10.65□□□□□ -0.7
SYNRG-224ENST00000618829 GCC2Q8IWJ2 1684 aa10.65□□□□□ -0.7
SYNRG-224ENST00000618829 DNAJC5BQ9UF47 199 aa10.64□□□□□ -0.71
SYNRG-224ENST00000618829 CDC42BPAQ5VT25 1732 aa10.63□□□□□ -0.71
SYNRG-224ENST00000618829 PCF11O94913 1555 aaKnown RBP10.63□□□□□ -0.71
SYNRG-224ENST00000618829 RAPGEF2Q9Y4G8 1499 aa10.61□□□□□ -0.71
SYNRG-224ENST00000618829 KCNA4P22459 653 aa10.6□□□□□ -0.71
SYNRG-224ENST00000618829 NEUROD1Q13562 356 aa10.6□□□□□ -0.71
SYNRG-224ENST00000618829 ACIN1Q9UKV3 1341 aaKnown RBP10.6□□□□□ -0.71
SYNRG-224ENST00000618829 IGF1RP08069 1367 aa10.6□□□□□ -0.71
SYNRG-224ENST00000618829 ARHGAP35Q9NRY4 1499 aa10.59□□□□□ -0.71
SYNRG-224ENST00000618829 TIAM1Q13009 1591 aa10.59□□□□□ -0.71
SYNRG-224ENST00000618829 ZNF316A6NFI3 1004 aaPredicted RBP10.59□□□□□ -0.71
SYNRG-224ENST00000618829 CENPBP07199 599 aaPredicted RBP10.58□□□□□ -0.72
SYNRG-224ENST00000618829 MAGI3Q5TCQ9 1506 aa10.58□□□□□ -0.72
SYNRG-224ENST00000618829 CDC42BPBQ9Y5S2 1711 aa10.57□□□□□ -0.72
SYNRG-224ENST00000618829 VPS8Q8N3P4 1428 aa10.57□□□□□ -0.72
SYNRG-224ENST00000618829 ZNF608Q9ULD9 1512 aaPredicted RBP10.57□□□□□ -0.72
SYNRG-224ENST00000618829 ADGBQ8N7X0 1667 aa10.56□□□□□ -0.72
SYNRG-224ENST00000618829 YTHDC1Q96MU7 727 aaKnown RBP10.56□□□□□ -0.72
SYNRG-224ENST00000618829 GRIN2AQ12879 1464 aa10.56□□□□□ -0.72
SYNRG-224ENST00000618829 RTN4Q9NQC3 1192 aaKnown RBP10.55□□□□□ -0.72
SYNRG-224ENST00000618829 ABCA9Q8IUA7 1624 aa10.55□□□□□ -0.72
SYNRG-224ENST00000618829 SYNJ2O15056 1496 aa10.55□□□□□ -0.72
SYNRG-224ENST00000618829 RAD54L2Q9Y4B4 1467 aa10.55□□□□□ -0.72
SYNRG-224ENST00000618829 MAST1Q9Y2H9 1570 aa10.55□□□□□ -0.72
SYNRG-224ENST00000618829 RAPGEF6Q8TEU7 1601 aa10.54□□□□□ -0.72
SYNRG-224ENST00000618829 ARAP3Q8WWN8 1544 aa10.54□□□□□ -0.72
SYNRG-224ENST00000618829 DEPDC5O75140 1603 aa10.54□□□□□ -0.72
SYNRG-224ENST00000618829 UHRF1BP1LA0JNW5 1464 aa10.54□□□□□ -0.72
SYNRG-224ENST00000618829 GTF3C3Q9Y5Q9 886 aa10.53□□□□□ -0.72
SYNRG-224ENST00000618829 PREX2Q70Z35 1606 aa10.53□□□□□ -0.72
SYNRG-224ENST00000618829 MAP3K4Q9Y6R4 1608 aa10.53□□□□□ -0.72
SYNRG-224ENST00000618829 GAPVD1Q14C86 1478 aa10.52□□□□□ -0.73
SYNRG-224ENST00000618829 FYCO1Q9BQS8 1478 aa10.52□□□□□ -0.73
SYNRG-224ENST00000618829 KIF13AQ9H1H9 1805 aa10.51□□□□□ -0.73
SYNRG-224ENST00000618829 FHAD1B1AJZ9 1412 aa10.51□□□□□ -0.73
SYNRG-224ENST00000618829 TCOF1Q13428 1488 aaKnown RBP10.5□□□□□ -0.73
SYNRG-224ENST00000618829 ITSN2Q9NZM3 1697 aa10.48□□□□□ -0.73
SYNRG-224ENST00000618829 HECW1Q76N89 1606 aa10.48□□□□□ -0.73
SYNRG-224ENST00000618829 PELP1Q8IZL8 1130 aaKnown RBP10.48□□□□□ -0.73
SYNRG-224ENST00000618829 ZCCHC11Q5TAX3 1644 aaKnown RBP10.47□□□□□ -0.73
SYNRG-224ENST00000618829 ITGAEP38570 1179 aa10.47□□□□□ -0.73
SYNRG-224ENST00000618829 POLR1AO95602 1720 aaPredicted RBP10.46□□□□□ -0.73
SYNRG-224ENST00000618829 KANK4Q5T7N3 995 aaPredicted RBP10.46□□□□□ -0.73
SYNRG-224ENST00000618829 KIF27Q86VH2 1401 aa10.46□□□□□ -0.73
SYNRG-224ENST00000618829 MIER1Q8N108 512 aa10.46□□□□□ -0.73
SYNRG-224ENST00000618829 KIAA0586Q9BVV6 1533 aa10.45□□□□□ -0.74
SYNRG-224ENST00000618829 GLI2P10070 1586 aa10.44□□□□□ -0.74
SYNRG-224ENST00000618829 NEURL4Q96JN8 1562 aa10.43□□□□□ -0.74
SYNRG-224ENST00000618829 IFT172Q9UG01 1749 aa10.43□□□□□ -0.74
SYNRG-224ENST00000618829 PLXNC1O60486 1568 aa10.42□□□□□ -0.74
SYNRG-224ENST00000618829 ARHGEF5Q12774 1597 aa10.4□□□□□ -0.74
SYNRG-224ENST00000618829 ERCC6L2Q5T890 1561 aa10.4□□□□□ -0.74
SYNRG-224ENST00000618829 DNMT1P26358 1616 aaKnown RBP10.4□□□□□ -0.74
SYNRG-224ENST00000618829 KDM5DQ9BY66 1539 aa10.4□□□□□ -0.75
SYNRG-224ENST00000618829 ATP1B4Q9UN42 357 aaPredicted RBP10.39□□□□□ -0.75
SYNRG-224ENST00000618829 ABCC10Q5T3U5 1492 aa10.39□□□□□ -0.75
SYNRG-224ENST00000618829 RICTORQ6R327 1708 aa10.39□□□□□ -0.75
SYNRG-224ENST00000618829 SUPT6HQ7KZ85 1726 aaKnown RBP10.39□□□□□ -0.75
SYNRG-224ENST00000618829 MAGI2Q86UL8 1455 aa10.39□□□□□ -0.75
SYNRG-224ENST00000618829 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.38□□□□□ -0.75
SYNRG-224ENST00000618829 SIGLEC1Q9BZZ2 1709 aa10.38□□□□□ -0.75
SYNRG-224ENST00000618829 VWDEQ8N2E2 1590 aa10.38□□□□□ -0.75
SYNRG-224ENST00000618829 MYO5CQ9NQX4 1742 aa10.37□□□□□ -0.75
SYNRG-224ENST00000618829 INO80Q9ULG1 1556 aaPredicted RBP10.37□□□□□ -0.75
SYNRG-224ENST00000618829 CASKIN1Q8WXD9 1431 aa10.37□□□□□ -0.75
SYNRG-224ENST00000618829 RRBP1Q9P2E9 1410 aaKnown RBP10.37□□□□□ -0.75
SYNRG-224ENST00000618829 FRMPD1Q5SYB0 1578 aa10.37□□□□□ -0.75
SYNRG-224ENST00000618829 REREQ9P2R6 1566 aa10.37□□□□□ -0.75
SYNRG-224ENST00000618829 UNC13BO14795 1591 aa10.37□□□□□ -0.75
SYNRG-224ENST00000618829 MAPKBP1O60336 1514 aa10.36□□□□□ -0.75
SYNRG-224ENST00000618829 DHX57Q6P158 1386 aaKnown RBP10.36□□□□□ -0.75
SYNRG-224ENST00000618829 P3H3Q8IVL6 736 aa10.36□□□□□ -0.75
SYNRG-224ENST00000618829 EHBP1L1Q8N3D4 1523 aa10.35□□□□□ -0.75
SYNRG-224ENST00000618829 ABCC2Q92887 1545 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms