RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 PBRM1Q86U86 1689 aa18.67■□□□□ 0.58
SRRT-216ENST00000618262 PRXQ9BXM0 1461 aa18.65■□□□□ 0.58
SRRT-216ENST00000618262 GOLGA3Q08378 1498 aa18.62■□□□□ 0.57
SRRT-216ENST00000618262 ERICH3Q5RHP9 1530 aa18.61■□□□□ 0.57
SRRT-216ENST00000618262 FHAD1B1AJZ9 1412 aa18.61■□□□□ 0.57
SRRT-216ENST00000618262 PPARGC1BQ86YN6 1023 aaKnown RBP18.58■□□□□ 0.56
SRRT-216ENST00000618262 ADAMTS12P58397 1594 aa18.56■□□□□ 0.56
SRRT-216ENST00000618262 SYNJ2O15056 1496 aa18.55■□□□□ 0.56
SRRT-216ENST00000618262 ATP1B4Q9UN42 357 aaPredicted RBP18.55■□□□□ 0.56
SRRT-216ENST00000618262 ARID3CA6NKF2 412 aa18.54■□□□□ 0.56
SRRT-216ENST00000618262 MAGI1Q96QZ7 1491 aaPredicted RBP18.54■□□□□ 0.56
SRRT-216ENST00000618262 GRIN2AQ12879 1464 aa18.54■□□□□ 0.56
SRRT-216ENST00000618262 PLEKHG5O94827 1062 aa18.51■□□□□ 0.55
SRRT-216ENST00000618262 KIF21BO75037 1637 aa18.5■□□□□ 0.55
SRRT-216ENST00000618262 CUL7Q14999 1698 aa18.5■□□□□ 0.55
SRRT-216ENST00000618262 OSCARQ8IYS5 282 aa18.48■□□□□ 0.55
SRRT-216ENST00000618262 CHD1O14646 1710 aa18.48■□□□□ 0.55
SRRT-216ENST00000618262 CEP162Q5TB80 1403 aa18.48■□□□□ 0.55
SRRT-216ENST00000618262 TNIKQ9UKE5 1360 aa18.47■□□□□ 0.55
SRRT-216ENST00000618262 JPH4Q96JJ6 628 aa18.46■□□□□ 0.55
SRRT-216ENST00000618262 CEP170Q5SW79 1584 aa18.44■□□□□ 0.54
SRRT-216ENST00000618262 CLIP1P30622 1438 aa18.43■□□□□ 0.54
SRRT-216ENST00000618262 FHOD3Q2V2M9 1422 aa18.39■□□□□ 0.53
SRRT-216ENST00000618262 CENPBP07199 599 aaPredicted RBP18.37■□□□□ 0.53
SRRT-216ENST00000618262 NUP160Q12769 1436 aa18.33■□□□□ 0.53
SRRT-216ENST00000618262 KIAA0586Q9BVV6 1533 aa18.32■□□□□ 0.52
SRRT-216ENST00000618262 PRG4Q92954 1404 aaPredicted RBP18.32■□□□□ 0.52
SRRT-216ENST00000618262 IQGAP2Q13576 1575 aa18.32■□□□□ 0.52
SRRT-216ENST00000618262 ARHGAP35Q9NRY4 1499 aa18.31■□□□□ 0.52
SRRT-216ENST00000618262 ERCC6L2Q5T890 1561 aa18.3■□□□□ 0.52
SRRT-216ENST00000618262 NCBP3Q53F19 620 aaKnown RBP18.3■□□□□ 0.52
SRRT-216ENST00000618262 ARAP1Q96P48 1450 aa18.3■□□□□ 0.52
SRRT-216ENST00000618262 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.29■□□□□ 0.52
SRRT-216ENST00000618262 HNRNPUL2Q1KMD3 747 aaKnown RBP18.29■□□□□ 0.52
SRRT-216ENST00000618262 CTTNBP2Q8WZ74 1663 aa18.28■□□□□ 0.52
SRRT-216ENST00000618262 CYB5RLQ6IPT4 315 aa18.26■□□□□ 0.51
SRRT-216ENST00000618262 DISP1Q96F81 1524 aa18.21■□□□□ 0.51
SRRT-216ENST00000618262 CARMIL2Q6F5E8 1435 aa18.17■□□□□ 0.5
SRRT-216ENST00000618262 CLASP1Q7Z460 1538 aa18.16■□□□□ 0.5
SRRT-216ENST00000618262 PTPRGP23470 1445 aa18.15■□□□□ 0.5
SRRT-216ENST00000618262 PLB1Q6P1J6 1458 aa18.15■□□□□ 0.5
SRRT-216ENST00000618262 UGGT2Q9NYU1 1516 aa18.13■□□□□ 0.49
SRRT-216ENST00000618262 KIAA0556O60303 1618 aa18.12■□□□□ 0.49
SRRT-216ENST00000618262 KANK4Q5T7N3 995 aaPredicted RBP18.12■□□□□ 0.49
SRRT-216ENST00000618262 PODXL2Q9NZ53 605 aa18.11■□□□□ 0.49
SRRT-216ENST00000618262 VPS8Q8N3P4 1428 aa18.11■□□□□ 0.49
SRRT-216ENST00000618262 SAMD9Q5K651 1589 aa18.08■□□□□ 0.48
SRRT-216ENST00000618262 ARHGEF11O15085 1522 aa18.07■□□□□ 0.48
SRRT-216ENST00000618262 KCNH8Q96L42 1107 aa18.05■□□□□ 0.48
SRRT-216ENST00000618262 EFCAB5A4FU69 1503 aa18.05■□□□□ 0.48
SRRT-216ENST00000618262 PCF11O94913 1555 aaKnown RBP18.04■□□□□ 0.48
SRRT-216ENST00000618262 UBE2Q2Q8WVN8 375 aa18.03■□□□□ 0.48
SRRT-216ENST00000618262 FMN1Q68DA7 1419 aa18.03■□□□□ 0.48
SRRT-216ENST00000618262 PLPPR3Q6T4P5 718 aa18.03■□□□□ 0.48
SRRT-216ENST00000618262 CDK13Q14004 1512 aaKnown RBP18.02■□□□□ 0.48
SRRT-216ENST00000618262 SHROOM2Q13796 1616 aa18.01■□□□□ 0.47
SRRT-216ENST00000618262 RIMBP3CA6NJZ7 1639 aa17.97■□□□□ 0.47
SRRT-216ENST00000618262 RIMBP3BA6NNM3 1639 aa17.97■□□□□ 0.47
SRRT-216ENST00000618262 RIMBP3Q9UFD9 1639 aa17.97■□□□□ 0.47
SRRT-216ENST00000618262 DNAJC5Q9H3Z4 198 aa17.96■□□□□ 0.47
SRRT-216ENST00000618262 UACAQ9BZF9 1416 aa17.95■□□□□ 0.46
SRRT-216ENST00000618262 KLHL34Q8N239 644 aa17.95■□□□□ 0.46
SRRT-216ENST00000618262 NUP153P49790 1475 aaKnown RBP17.95■□□□□ 0.46
SRRT-216ENST00000618262 CASKIN1Q8WXD9 1431 aa17.94■□□□□ 0.46
SRRT-216ENST00000618262 NPM1P06748 294 aaKnown RBP eCLIP17.94■□□□□ 0.46
SRRT-216ENST00000618262 ACIN1Q9UKV3 1341 aaKnown RBP17.94■□□□□ 0.46
SRRT-216ENST00000618262 ITGAEP38570 1179 aa17.92■□□□□ 0.46
SRRT-216ENST00000618262 ANP32EQ9BTT0 268 aa17.92■□□□□ 0.46
SRRT-216ENST00000618262 MTUS2Q5JR59 1369 aa17.92■□□□□ 0.46
SRRT-216ENST00000618262 PCGF6Q9BYE7 350 aa17.92■□□□□ 0.46
SRRT-216ENST00000618262 RTN4Q9NQC3 1192 aaKnown RBP17.91■□□□□ 0.46
SRRT-216ENST00000618262 RAPGEF6Q8TEU7 1601 aa17.9■□□□□ 0.46
SRRT-216ENST00000618262 EPRSP07814 1512 aaKnown RBP17.9■□□□□ 0.46
SRRT-216ENST00000618262 PLEKHD1A6NEE1 506 aa17.89■□□□□ 0.45
SRRT-216ENST00000618262 ATP10BO94823 1461 aa17.88■□□□□ 0.45
SRRT-216ENST00000618262 FYCO1Q9BQS8 1478 aa17.88■□□□□ 0.45
SRRT-216ENST00000618262 ARXQ96QS3 562 aa17.88■□□□□ 0.45
SRRT-216ENST00000618262 LRRIQ1Q96JM4 1722 aa17.87■□□□□ 0.45
SRRT-216ENST00000618262 ANO8Q9HCE9 1232 aaPredicted RBP17.87■□□□□ 0.45
SRRT-216ENST00000618262 ZNF777Q9ULD5 760 aaPredicted RBP17.86■□□□□ 0.45
SRRT-216ENST00000618262 ABCA8O94911 1581 aa17.84■□□□□ 0.45
SRRT-216ENST00000618262 ADCY10Q96PN6 1610 aa17.84■□□□□ 0.45
SRRT-216ENST00000618262 MAGI3Q5TCQ9 1506 aa17.83■□□□□ 0.45
SRRT-216ENST00000618262 GTF3C3Q9Y5Q9 886 aa17.83■□□□□ 0.45
SRRT-216ENST00000618262 CDK11AQ9UQ88 783 aaPredicted RBP17.83■□□□□ 0.44
SRRT-216ENST00000618262 HECW1Q76N89 1606 aa17.83■□□□□ 0.44
SRRT-216ENST00000618262 FAM50AQ14320 339 aaKnown RBP17.82■□□□□ 0.44
SRRT-216ENST00000618262 ABCC2Q92887 1545 aa17.82■□□□□ 0.44
SRRT-216ENST00000618262 TIAM1Q13009 1591 aa17.81■□□□□ 0.44
SRRT-216ENST00000618262 LRRC9Q6ZRR7 1453 aa17.8■□□□□ 0.44
SRRT-216ENST00000618262 TRHP20396 242 aaPredicted RBP17.79■□□□□ 0.44
SRRT-216ENST00000618262 TIMELESSQ9UNS1 1208 aa17.78■□□□□ 0.44
SRRT-216ENST00000618262 PHLDB1Q86UU1 1377 aa17.76■□□□□ 0.43
SRRT-216ENST00000618262 ZNF644Q9H582 1327 aaPredicted RBP17.76■□□□□ 0.43
SRRT-216ENST00000618262 PKNOX2Q96KN3 472 aa17.75■□□□□ 0.43
SRRT-216ENST00000618262 ASXL2Q76L83 1435 aa17.74■□□□□ 0.43
SRRT-216ENST00000618262 ZCCHC11Q5TAX3 1644 aaKnown RBP17.73■□□□□ 0.43
SRRT-216ENST00000618262 FAM69CQ0P6D2 419 aa17.73■□□□□ 0.43
SRRT-216ENST00000618262 CCDC18Q5T9S5 1454 aa17.73■□□□□ 0.43
SRRT-216ENST00000618262 NEUROD1Q13562 356 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms