RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 EIF4G3O43432 1585 aaKnown RBP14.13□□□□□ -0.15
SCAMP1-206ENST00000618166 CFTRP13569 1480 aa14.11□□□□□ -0.15
SCAMP1-206ENST00000618166 KDM4FA0A1W2PPD8 638 aa14.09□□□□□ -0.15
SCAMP1-206ENST00000618166 ZBTB12Q9Y330 459 aaPredicted RBP14.08□□□□□ -0.16
SCAMP1-206ENST00000618166 REM2Q8IYK8 340 aaPredicted RBP14.07□□□□□ -0.16
SCAMP1-206ENST00000618166 PIP4P2Q8N4L2 257 aa14.07□□□□□ -0.16
SCAMP1-206ENST00000618166 AQRO60306 1485 aaKnown RBP eCLIP14.06□□□□□ -0.16
SCAMP1-206ENST00000618166 ATF5Q9Y2D1 282 aaPredicted RBP14.02□□□□□ -0.17
SCAMP1-206ENST00000618166 CLASP1Q7Z460 1538 aa14.02□□□□□ -0.17
SCAMP1-206ENST00000618166 WIZO95785 1651 aa14□□□□□ -0.17
SCAMP1-206ENST00000618166 PLSCR2Q9NRY7 297 aa13.96□□□□□ -0.18
SCAMP1-206ENST00000618166 TOPBP1Q92547 1522 aa13.95□□□□□ -0.18
SCAMP1-206ENST00000618166 GAPVD1Q14C86 1478 aa13.95□□□□□ -0.18
SCAMP1-206ENST00000618166 HAX1O00165 279 aa13.93□□□□□ -0.18
SCAMP1-206ENST00000618166 FXR2P51116 673 aaKnown RBP eCLIP13.93□□□□□ -0.18
SCAMP1-206ENST00000618166 PITPNM1O00562 1244 aa13.92□□□□□ -0.18
SCAMP1-206ENST00000618166 TARBP1Q13395 1621 aaKnown RBP13.9□□□□□ -0.18
SCAMP1-206ENST00000618166 FOXD4L1Q9NU39 408 aa13.88□□□□□ -0.19
SCAMP1-206ENST00000618166 SNAPC4Q5SXM2 1469 aa13.87□□□□□ -0.19
SCAMP1-206ENST00000618166 SYNJ1O43426 1573 aa13.86□□□□□ -0.19
SCAMP1-206ENST00000618166 KIF13AQ9H1H9 1805 aa13.86□□□□□ -0.19
SCAMP1-206ENST00000618166 ERCC6L2Q5T890 1561 aa13.83□□□□□ -0.2
SCAMP1-206ENST00000618166 HECW2Q9P2P5 1572 aa13.83□□□□□ -0.2
SCAMP1-206ENST00000618166 FBXO41Q8TF61 875 aa13.83□□□□□ -0.2
SCAMP1-206ENST00000618166 TDRD9Q8NDG6 1382 aaKnown RBP13.82□□□□□ -0.2
SCAMP1-206ENST00000618166 CHMP7Q8WUX9 453 aaPredicted RBP13.82□□□□□ -0.2
SCAMP1-206ENST00000618166 PRDM2Q13029 1718 aa13.79□□□□□ -0.2
SCAMP1-206ENST00000618166 DNMBPQ6XZF7 1577 aa13.79□□□□□ -0.2
SCAMP1-206ENST00000618166 LMTK3Q96Q04 1460 aa13.79□□□□□ -0.2
SCAMP1-206ENST00000618166 RAD54L2Q9Y4B4 1467 aa13.79□□□□□ -0.2
SCAMP1-206ENST00000618166 POLA1P09884 1462 aaPredicted RBP13.76□□□□□ -0.21
SCAMP1-206ENST00000618166 SLC4A1APQ9BWU0 796 aaKnown RBP13.76□□□□□ -0.21
SCAMP1-206ENST00000618166 EVX2Q03828 476 aa13.75□□□□□ -0.21
SCAMP1-206ENST00000618166 ABCC8Q09428 1581 aa13.74□□□□□ -0.21
SCAMP1-206ENST00000618166 KDM6BO15054 1643 aa13.72□□□□□ -0.21
SCAMP1-206ENST00000618166 ADGRL1O94910 1474 aa13.71□□□□□ -0.21
SCAMP1-206ENST00000618166 FAM69CQ0P6D2 419 aa13.71□□□□□ -0.21
SCAMP1-206ENST00000618166 ILDR2Q71H61 639 aa13.71□□□□□ -0.21
SCAMP1-206ENST00000618166 SYNJ2O15056 1496 aa13.7□□□□□ -0.22
SCAMP1-206ENST00000618166 MAGI1Q96QZ7 1491 aaPredicted RBP13.7□□□□□ -0.22
SCAMP1-206ENST00000618166 TOP2AP11388 1531 aaKnown RBP13.69□□□□□ -0.22
SCAMP1-206ENST00000618166 SOCS7O14512 581 aa13.68□□□□□ -0.22
SCAMP1-206ENST00000618166 SOGA1O94964 1423 aa13.66□□□□□ -0.22
SCAMP1-206ENST00000618166 ABCC10Q5T3U5 1492 aa13.66□□□□□ -0.22
SCAMP1-206ENST00000618166 GRIN2BQ13224 1484 aa13.63□□□□□ -0.23
SCAMP1-206ENST00000618166 LHX8Q68G74 356 aa13.62□□□□□ -0.23
SCAMP1-206ENST00000618166 CEP170Q5SW79 1584 aa13.62□□□□□ -0.23
SCAMP1-206ENST00000618166 SPDYE2BA6NHP3 402 aa13.61□□□□□ -0.23
SCAMP1-206ENST00000618166 SPDYE6P0CI01 402 aa13.61□□□□□ -0.23
SCAMP1-206ENST00000618166 SPDYE2Q495Y8 402 aa13.61□□□□□ -0.23
SCAMP1-206ENST00000618166 DIP2BQ9P265 1576 aa13.61□□□□□ -0.23
SCAMP1-206ENST00000618166 CCDC88BA6NC98 1476 aa13.59□□□□□ -0.23
SCAMP1-206ENST00000618166 WDR97A6NE52 1622 aa13.56□□□□□ -0.24
SCAMP1-206ENST00000618166 FGD5Q6ZNL6 1462 aa13.55□□□□□ -0.24
SCAMP1-206ENST00000618166 TSPOAP1O95153 1857 aa13.54□□□□□ -0.24
SCAMP1-206ENST00000618166 ATXN8OSP0DMR3 200 aa13.54□□□□□ -0.24
SCAMP1-206ENST00000618166 PRKAR2AP13861 404 aaKnown RBP13.54□□□□□ -0.24
SCAMP1-206ENST00000618166 DISP3Q9P2K9 1392 aa13.53□□□□□ -0.24
SCAMP1-206ENST00000618166 MAPKBP1O60336 1514 aa13.51□□□□□ -0.25
SCAMP1-206ENST00000618166 ZBTB22O15209 634 aa13.51□□□□□ -0.25
SCAMP1-206ENST00000618166 PBRM1Q86U86 1689 aa13.51□□□□□ -0.25
SCAMP1-206ENST00000618166 C19orf67A6NJJ6 358 aa13.5□□□□□ -0.25
SCAMP1-206ENST00000618166 SHROOM2Q13796 1616 aa13.5□□□□□ -0.25
SCAMP1-206ENST00000618166 SPDYE1Q8NFV5 336 aaPredicted RBP13.49□□□□□ -0.25
SCAMP1-206ENST00000618166 GRIN2AQ12879 1464 aa13.48□□□□□ -0.25
SCAMP1-206ENST00000618166 NUP160Q12769 1436 aa13.47□□□□□ -0.25
SCAMP1-206ENST00000618166 CLEC11AQ9Y240 323 aa13.45□□□□□ -0.26
SCAMP1-206ENST00000618166 PRG4Q92954 1404 aaPredicted RBP13.44□□□□□ -0.26
SCAMP1-206ENST00000618166 NPM1P06748 294 aaKnown RBP eCLIP13.44□□□□□ -0.26
SCAMP1-206ENST00000618166 COL17A1Q9UMD9 1497 aaPredicted RBP13.43□□□□□ -0.26
SCAMP1-206ENST00000618166 ADCY10Q96PN6 1610 aa13.42□□□□□ -0.26
SCAMP1-206ENST00000618166 GABBR2O75899 941 aa13.42□□□□□ -0.26
SCAMP1-206ENST00000618166 CUX1P39880 1505 aa13.4□□□□□ -0.26
SCAMP1-206ENST00000618166 SSUH2Q9Y2M2 353 aa13.38□□□□□ -0.27
SCAMP1-206ENST00000618166 ABCA5Q8WWZ7 1642 aa13.38□□□□□ -0.27
SCAMP1-206ENST00000618166 PPRC1Q5VV67 1664 aaKnown RBP13.38□□□□□ -0.27
SCAMP1-206ENST00000618166 MKRN4PQ13434 485 aaPredicted RBP13.36□□□□□ -0.27
SCAMP1-206ENST00000618166 ADAMTS12P58397 1594 aa13.36□□□□□ -0.27
SCAMP1-206ENST00000618166 ZNF692Q9BU19 519 aaPredicted RBP13.33□□□□□ -0.27
SCAMP1-206ENST00000618166 JPH4Q96JJ6 628 aa13.32□□□□□ -0.28
SCAMP1-206ENST00000618166 SPATA31D1Q6ZQQ2 1576 aa13.3□□□□□ -0.28
SCAMP1-206ENST00000618166 ABCA10Q8WWZ4 1543 aa13.3□□□□□ -0.28
SCAMP1-206ENST00000618166 TOP2BQ02880 1626 aa13.29□□□□□ -0.28
SCAMP1-206ENST00000618166 CHADLQ6NUI6 762 aa13.27□□□□□ -0.29
SCAMP1-206ENST00000618166 CERKQ8TCT0 537 aa13.25□□□□□ -0.29
SCAMP1-206ENST00000618166 FHAD1B1AJZ9 1412 aa13.24□□□□□ -0.29
SCAMP1-206ENST00000618166 GLI2P10070 1586 aa13.21□□□□□ -0.29
SCAMP1-206ENST00000618166 ASXL2Q76L83 1435 aa13.21□□□□□ -0.3
SCAMP1-206ENST00000618166 RUSC2Q8N2Y8 1516 aa13.19□□□□□ -0.3
SCAMP1-206ENST00000618166 PRR29P0C7W0 189 aa13.19□□□□□ -0.3
SCAMP1-206ENST00000618166 PCF11O94913 1555 aaKnown RBP13.18□□□□□ -0.3
SCAMP1-206ENST00000618166 PTPRMP28827 1452 aa13.18□□□□□ -0.3
SCAMP1-206ENST00000618166 KIF21BO75037 1637 aa13.17□□□□□ -0.3
SCAMP1-206ENST00000618166 TTBK1Q5TCY1 1321 aaPredicted RBP13.16□□□□□ -0.3
SCAMP1-206ENST00000618166 HSPA2P54652 639 aa13.15□□□□□ -0.3
SCAMP1-206ENST00000618166 MAP3K4Q9Y6R4 1608 aa13.14□□□□□ -0.31
SCAMP1-206ENST00000618166 PLB1Q6P1J6 1458 aa13.14□□□□□ -0.31
SCAMP1-206ENST00000618166 POTEIP0CG38 1075 aa13.13□□□□□ -0.31
SCAMP1-206ENST00000618166 ABCC2Q92887 1545 aa13.13□□□□□ -0.31
SCAMP1-206ENST00000618166 EPRSP07814 1512 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms