RNA–Protein interactions for RNA: ENST00000617860.4

GGNBP2-215, Transcript of gametogenetin binding protein 2, humanhuman

TSL 2

Gene GGNBP2, Length 3,497 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGNBP2-215ENST00000617860 CUX1P39880 1505 aa20.22■□□□□ 0.83
GGNBP2-215ENST00000617860 ANP32CO43423 234 aa20.22■□□□□ 0.83
GGNBP2-215ENST00000617860 ARHGAP35Q9NRY4 1499 aa20.21■□□□□ 0.83
GGNBP2-215ENST00000617860 CHIC2Q9UKJ5 165 aa20.21■□□□□ 0.83
GGNBP2-215ENST00000617860 IGF1RP08069 1367 aa20.2■□□□□ 0.82
GGNBP2-215ENST00000617860 SETD5Q9C0A6 1442 aa20.15■□□□□ 0.82
GGNBP2-215ENST00000617860 PHLDB1Q86UU1 1377 aa20.15■□□□□ 0.82
GGNBP2-215ENST00000617860 RRBP1Q9P2E9 1410 aaKnown RBP20.14■□□□□ 0.81
GGNBP2-215ENST00000617860 IRX6P78412 446 aaPredicted RBP20.13■□□□□ 0.81
GGNBP2-215ENST00000617860 TSHZ2Q9NRE2 1034 aa20.12■□□□□ 0.81
GGNBP2-215ENST00000617860 TONSLQ96HA7 1378 aa20.11■□□□□ 0.81
GGNBP2-215ENST00000617860 FHOD3Q2V2M9 1422 aa20.1■□□□□ 0.81
GGNBP2-215ENST00000617860 RRP7BPQ9NSQ0 103 aa20.1■□□□□ 0.81
GGNBP2-215ENST00000617860 ERICH3Q5RHP9 1530 aa20.1■□□□□ 0.81
GGNBP2-215ENST00000617860 POLR3GLQ9BT43 218 aa20.09■□□□□ 0.81
GGNBP2-215ENST00000617860 NCAPD3P42695 1498 aa20.07■□□□□ 0.8
GGNBP2-215ENST00000617860 MTUS2Q5JR59 1369 aa20.05■□□□□ 0.8
GGNBP2-215ENST00000617860 HNRNPUQ00839 825 aaKnown RBP eCLIP20.04■□□□□ 0.8
GGNBP2-215ENST00000617860 CFTRP13569 1480 aa20.03■□□□□ 0.8
GGNBP2-215ENST00000617860 PPP1R15AO75807 674 aaPredicted RBP20.03■□□□□ 0.8
GGNBP2-215ENST00000617860 CADPSQ9ULU8 1353 aa20.03■□□□□ 0.8
GGNBP2-215ENST00000617860 ANP32EQ9BTT0 268 aa20.02■□□□□ 0.8
GGNBP2-215ENST00000617860 FGD5Q6ZNL6 1462 aa20■□□□□ 0.79
GGNBP2-215ENST00000617860 SENP3-EIF4A1A0A087X0R7 540 aa20■□□□□ 0.79
GGNBP2-215ENST00000617860 RAD54L2Q9Y4B4 1467 aa19.98■□□□□ 0.79
GGNBP2-215ENST00000617860 LRRC9Q6ZRR7 1453 aa19.97■□□□□ 0.79
GGNBP2-215ENST00000617860 FOXD1Q16676 465 aa19.96■□□□□ 0.79
GGNBP2-215ENST00000617860 BIVM-ERCC5R4GMW8 1640 aa19.96■□□□□ 0.79
GGNBP2-215ENST00000617860 FHAD1B1AJZ9 1412 aa19.96■□□□□ 0.79
GGNBP2-215ENST00000617860 SLC24A1O60721 1099 aa19.96■□□□□ 0.79
GGNBP2-215ENST00000617860 TDRD9Q8NDG6 1382 aaKnown RBP19.95■□□□□ 0.78
GGNBP2-215ENST00000617860 WDR97A6NE52 1622 aa19.95■□□□□ 0.78
GGNBP2-215ENST00000617860 ZNF326Q5BKZ1 582 aaKnown RBP19.93■□□□□ 0.78
GGNBP2-215ENST00000617860 FAM9BQ8IZU0 186 aa19.92■□□□□ 0.78
GGNBP2-215ENST00000617860 MAPKBP1O60336 1514 aa19.88■□□□□ 0.77
GGNBP2-215ENST00000617860 TIAM1Q13009 1591 aa19.87■□□□□ 0.77
GGNBP2-215ENST00000617860 HMGXB3Q12766 1538 aa19.84■□□□□ 0.77
GGNBP2-215ENST00000617860 FANCD2Q9BXW9 1451 aa19.83■□□□□ 0.77
GGNBP2-215ENST00000617860 RBM19Q9Y4C8 960 aaKnown RBP19.81■□□□□ 0.76
GGNBP2-215ENST00000617860 HSPA5P11021 654 aaKnown RBP19.8■□□□□ 0.76
GGNBP2-215ENST00000617860 NESP48681 1621 aa19.8■□□□□ 0.76
GGNBP2-215ENST00000617860 ZNF777Q9ULD5 760 aaPredicted RBP19.79■□□□□ 0.76
GGNBP2-215ENST00000617860 TIMELESSQ9UNS1 1208 aa19.79■□□□□ 0.76
GGNBP2-215ENST00000617860 CCER2I3L3R5 266 aa19.78■□□□□ 0.76
GGNBP2-215ENST00000617860 DNAJC5BQ9UF47 199 aa19.78■□□□□ 0.76
GGNBP2-215ENST00000617860 ANO8Q9HCE9 1232 aaPredicted RBP19.77■□□□□ 0.76
GGNBP2-215ENST00000617860 EIF4G2P78344 907 aaKnown RBP eCLIP19.76■□□□□ 0.75
GGNBP2-215ENST00000617860 MRS2Q9HD23 443 aa19.75■□□□□ 0.75
GGNBP2-215ENST00000617860 FBLN2P98095 1184 aa19.74■□□□□ 0.75
GGNBP2-215ENST00000617860 CDK11AQ9UQ88 783 aaPredicted RBP19.74■□□□□ 0.75
GGNBP2-215ENST00000617860 PCF11O94913 1555 aaKnown RBP19.73■□□□□ 0.75
GGNBP2-215ENST00000617860 FGD6Q6ZV73 1430 aa19.73■□□□□ 0.75
GGNBP2-215ENST00000617860 CCDC18Q5T9S5 1454 aa19.73■□□□□ 0.75
GGNBP2-215ENST00000617860 CCDC184Q52MB2 194 aa19.7■□□□□ 0.74
GGNBP2-215ENST00000617860 L3MBTL2Q969R5 705 aa19.7■□□□□ 0.74
GGNBP2-215ENST00000617860 FMN1Q68DA7 1419 aa19.7■□□□□ 0.74
GGNBP2-215ENST00000617860 SLC4A1APQ9BWU0 796 aaKnown RBP19.69■□□□□ 0.74
GGNBP2-215ENST00000617860 PTPRKQ15262 1439 aa19.68■□□□□ 0.74
GGNBP2-215ENST00000617860 MPHOSPH9Q99550 1183 aa19.67■□□□□ 0.74
GGNBP2-215ENST00000617860 POLA1P09884 1462 aaPredicted RBP19.66■□□□□ 0.74
GGNBP2-215ENST00000617860 CASKIN1Q8WXD9 1431 aa19.66■□□□□ 0.74
GGNBP2-215ENST00000617860 B4GALNT3Q6L9W6 998 aa19.65■□□□□ 0.74
GGNBP2-215ENST00000617860 WASHC2AQ641Q2 1341 aa19.65■□□□□ 0.74
GGNBP2-215ENST00000617860 SALL2Q9Y467 1007 aaPredicted RBP19.62■□□□□ 0.73
GGNBP2-215ENST00000617860 EIF5BO60841 1220 aaKnown RBP19.61■□□□□ 0.73
GGNBP2-215ENST00000617860 ZNF644Q9H582 1327 aaPredicted RBP19.61■□□□□ 0.73
GGNBP2-215ENST00000617860 UACAQ9BZF9 1416 aa19.6■□□□□ 0.73
GGNBP2-215ENST00000617860 NCOA2Q15596 1464 aa19.59■□□□□ 0.73
GGNBP2-215ENST00000617860 TOPBP1Q92547 1522 aa19.59■□□□□ 0.73
GGNBP2-215ENST00000617860 FYCO1Q9BQS8 1478 aa19.59■□□□□ 0.73
GGNBP2-215ENST00000617860 C11orf95C9JLR9 678 aaPredicted RBP19.59■□□□□ 0.73
GGNBP2-215ENST00000617860 KDM2AQ9Y2K7 1162 aa19.59■□□□□ 0.73
GGNBP2-215ENST00000617860 AQRO60306 1485 aaKnown RBP eCLIP19.58■□□□□ 0.73
GGNBP2-215ENST00000617860 MAP3K1Q13233 1512 aa19.57■□□□□ 0.72
GGNBP2-215ENST00000617860 NAIPQ13075 1403 aa19.56■□□□□ 0.72
GGNBP2-215ENST00000617860 CC2D2AQ9P2K1 1620 aa19.56■□□□□ 0.72
GGNBP2-215ENST00000617860 MYOM3Q5VTT5 1437 aa19.56■□□□□ 0.72
GGNBP2-215ENST00000617860 HFM1A2PYH4 1435 aa19.54■□□□□ 0.72
GGNBP2-215ENST00000617860 CCDC136Q96JN2 1154 aa19.53■□□□□ 0.72
GGNBP2-215ENST00000617860 GAPVD1Q14C86 1478 aa19.51■□□□□ 0.71
GGNBP2-215ENST00000617860 NBPF8Q3BBV2 869 aa19.51■□□□□ 0.71
GGNBP2-215ENST00000617860 PRKRIP1Q9H875 184 aaPredicted RBP19.5■□□□□ 0.71
GGNBP2-215ENST00000617860 ABCA10Q8WWZ4 1543 aa19.49■□□□□ 0.71
GGNBP2-215ENST00000617860 CFDP1Q9UEE9 299 aaPredicted RBP19.48■□□□□ 0.71
GGNBP2-215ENST00000617860 PLEKHG5O94827 1062 aa19.45■□□□□ 0.7
GGNBP2-215ENST00000617860 PPP4R2Q9NY27 417 aa19.45■□□□□ 0.7
GGNBP2-215ENST00000617860 DNMBPQ6XZF7 1577 aa19.43■□□□□ 0.7
GGNBP2-215ENST00000617860 MSH5O43196 834 aa19.43■□□□□ 0.7
GGNBP2-215ENST00000617860 TMC1Q8TDI8 760 aa19.43■□□□□ 0.7
GGNBP2-215ENST00000617860 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.42■□□□□ 0.7
GGNBP2-215ENST00000617860 EFCAB5A4FU69 1503 aa19.42■□□□□ 0.7
GGNBP2-215ENST00000617860 NBR1Q14596 966 aa19.42■□□□□ 0.7
GGNBP2-215ENST00000617860 PKD2Q13563 968 aa19.4■□□□□ 0.7
GGNBP2-215ENST00000617860 PDS5BQ9NTI5 1447 aa19.4■□□□□ 0.7
GGNBP2-215ENST00000617860 KIF7Q2M1P5 1343 aa19.4■□□□□ 0.7
GGNBP2-215ENST00000617860 URB2Q14146 1524 aaKnown RBP19.39■□□□□ 0.7
GGNBP2-215ENST00000617860 PTPN23Q9H3S7 1636 aa19.39■□□□□ 0.69
GGNBP2-215ENST00000617860 CHMP7Q8WUX9 453 aaPredicted RBP19.38■□□□□ 0.69
GGNBP2-215ENST00000617860 SNAPC4Q5SXM2 1469 aa19.38■□□□□ 0.69
GGNBP2-215ENST00000617860 RGL3Q3MIN7 710 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms