RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 CHMP7Q8WUX9 453 aaPredicted RBP24.49■■□□□ 1.51
CBWD1-225ENST00000616944 NUP160Q12769 1436 aa24.49■■□□□ 1.51
CBWD1-225ENST00000616944 IQGAP2Q13576 1575 aa24.44■■□□□ 1.5
CBWD1-225ENST00000616944 KIAA0586Q9BVV6 1533 aa24.42■■□□□ 1.5
CBWD1-225ENST00000616944 FBLN2P98095 1184 aa24.42■■□□□ 1.5
CBWD1-225ENST00000616944 CLIP1P30622 1438 aa24.39■■□□□ 1.49
CBWD1-225ENST00000616944 SAMD9Q5K651 1589 aa24.35■■□□□ 1.49
CBWD1-225ENST00000616944 DNAJC5Q9H3Z4 198 aa24.34■■□□□ 1.49
CBWD1-225ENST00000616944 ARHGAP35Q9NRY4 1499 aa24.33■■□□□ 1.49
CBWD1-225ENST00000616944 EFCAB5A4FU69 1503 aa24.33■■□□□ 1.49
CBWD1-225ENST00000616944 UGGT2Q9NYU1 1516 aa24.33■■□□□ 1.49
CBWD1-225ENST00000616944 CLASP1Q7Z460 1538 aa24.31■■□□□ 1.48
CBWD1-225ENST00000616944 OSCARQ8IYS5 282 aa24.3■■□□□ 1.48
CBWD1-225ENST00000616944 SHROOM2Q13796 1616 aa24.28■■□□□ 1.48
CBWD1-225ENST00000616944 ARAP1Q96P48 1450 aa24.27■■□□□ 1.48
CBWD1-225ENST00000616944 RANGAP1P46060 587 aaPredicted RBP24.24■■□□□ 1.47
CBWD1-225ENST00000616944 DISP1Q96F81 1524 aa24.21■■□□□ 1.47
CBWD1-225ENST00000616944 KIAA0556O60303 1618 aa24.21■■□□□ 1.47
CBWD1-225ENST00000616944 JPH4Q96JJ6 628 aa24.15■■□□□ 1.46
CBWD1-225ENST00000616944 FHOD3Q2V2M9 1422 aa24.15■■□□□ 1.46
CBWD1-225ENST00000616944 VPS8Q8N3P4 1428 aa24.14■■□□□ 1.46
CBWD1-225ENST00000616944 PRG4Q92954 1404 aaPredicted RBP24.08■■□□□ 1.45
CBWD1-225ENST00000616944 CARMIL2Q6F5E8 1435 aa24.07■■□□□ 1.44
CBWD1-225ENST00000616944 P3H3Q8IVL6 736 aa24.07■■□□□ 1.44
CBWD1-225ENST00000616944 ERCC6L2Q5T890 1561 aa24.05■■□□□ 1.44
CBWD1-225ENST00000616944 FMN1Q68DA7 1419 aa24.04■■□□□ 1.44
CBWD1-225ENST00000616944 PCF11O94913 1555 aaKnown RBP24.03■■□□□ 1.44
CBWD1-225ENST00000616944 ARHGEF11O15085 1522 aa24■■□□□ 1.43
CBWD1-225ENST00000616944 RIMBP3CA6NJZ7 1639 aa23.99■■□□□ 1.43
CBWD1-225ENST00000616944 RIMBP3BA6NNM3 1639 aa23.99■■□□□ 1.43
CBWD1-225ENST00000616944 RIMBP3Q9UFD9 1639 aa23.99■■□□□ 1.43
CBWD1-225ENST00000616944 FYCO1Q9BQS8 1478 aa23.97■■□□□ 1.43
CBWD1-225ENST00000616944 CASKIN1Q8WXD9 1431 aa23.97■■□□□ 1.43
CBWD1-225ENST00000616944 LRRIQ1Q96JM4 1722 aa23.96■■□□□ 1.43
CBWD1-225ENST00000616944 RAPGEF6Q8TEU7 1601 aa23.92■■□□□ 1.42
CBWD1-225ENST00000616944 HECW1Q76N89 1606 aa23.9■■□□□ 1.42
CBWD1-225ENST00000616944 ABCA8O94911 1581 aa23.89■■□□□ 1.42
CBWD1-225ENST00000616944 CFAP43Q8NDM7 1665 aa23.89■■□□□ 1.41
CBWD1-225ENST00000616944 PTPRGP23470 1445 aa23.86■■□□□ 1.41
CBWD1-225ENST00000616944 PLB1Q6P1J6 1458 aa23.86■■□□□ 1.41
CBWD1-225ENST00000616944 MAP3K1Q13233 1512 aa23.86■■□□□ 1.41
CBWD1-225ENST00000616944 TIAM1Q13009 1591 aa23.85■■□□□ 1.41
CBWD1-225ENST00000616944 NUP153P49790 1475 aaKnown RBP23.83■■□□□ 1.4
CBWD1-225ENST00000616944 CCDC18Q5T9S5 1454 aa23.79■■□□□ 1.4
CBWD1-225ENST00000616944 TTBK1Q5TCY1 1321 aaPredicted RBP23.78■■□□□ 1.4
CBWD1-225ENST00000616944 EPRSP07814 1512 aaKnown RBP23.78■■□□□ 1.4
CBWD1-225ENST00000616944 ABCC2Q92887 1545 aa23.76■■□□□ 1.39
CBWD1-225ENST00000616944 UACAQ9BZF9 1416 aa23.76■■□□□ 1.39
CBWD1-225ENST00000616944 CDK13Q14004 1512 aaKnown RBP23.73■■□□□ 1.39
CBWD1-225ENST00000616944 UHRF1BP1LA0JNW5 1464 aa23.73■■□□□ 1.39
CBWD1-225ENST00000616944 APLP2Q06481 763 aa23.71■■□□□ 1.39
CBWD1-225ENST00000616944 ADCY10Q96PN6 1610 aa23.71■■□□□ 1.39
CBWD1-225ENST00000616944 ATP1B4Q9UN42 357 aaPredicted RBP23.7■■□□□ 1.39
CBWD1-225ENST00000616944 LRRC9Q6ZRR7 1453 aa23.7■■□□□ 1.38
CBWD1-225ENST00000616944 CYB5RLQ6IPT4 315 aa23.69■■□□□ 1.38
CBWD1-225ENST00000616944 MAGI3Q5TCQ9 1506 aa23.67■■□□□ 1.38
CBWD1-225ENST00000616944 KANK4Q5T7N3 995 aaPredicted RBP23.66■■□□□ 1.38
CBWD1-225ENST00000616944 ATP10BO94823 1461 aa23.66■■□□□ 1.38
CBWD1-225ENST00000616944 PPARGC1BQ86YN6 1023 aaKnown RBP23.63■■□□□ 1.37
CBWD1-225ENST00000616944 EHBP1L1Q8N3D4 1523 aa23.63■■□□□ 1.37
CBWD1-225ENST00000616944 KDM5BQ9UGL1 1544 aa23.63■■□□□ 1.37
CBWD1-225ENST00000616944 ZCCHC11Q5TAX3 1644 aaKnown RBP23.63■■□□□ 1.37
CBWD1-225ENST00000616944 ARID3CA6NKF2 412 aa23.58■■□□□ 1.36
CBWD1-225ENST00000616944 SUPT6HQ7KZ85 1726 aaKnown RBP23.56■■□□□ 1.36
CBWD1-225ENST00000616944 MTUS2Q5JR59 1369 aa23.55■■□□□ 1.36
CBWD1-225ENST00000616944 TROQ12816 1431 aaPredicted RBP23.52■■□□□ 1.36
CBWD1-225ENST00000616944 KIF14Q15058 1648 aa23.49■■□□□ 1.35
CBWD1-225ENST00000616944 CDK11AQ9UQ88 783 aaPredicted RBP23.48■■□□□ 1.35
CBWD1-225ENST00000616944 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.48■■□□□ 1.35
CBWD1-225ENST00000616944 HNRNPUL2Q1KMD3 747 aaKnown RBP23.48■■□□□ 1.35
CBWD1-225ENST00000616944 NCOA2Q15596 1464 aa23.47■■□□□ 1.35
CBWD1-225ENST00000616944 PHLDB1Q86UU1 1377 aa23.43■■□□□ 1.34
CBWD1-225ENST00000616944 PLEKHD1A6NEE1 506 aa23.41■■□□□ 1.34
CBWD1-225ENST00000616944 ABCC10Q5T3U5 1492 aa23.39■■□□□ 1.33
CBWD1-225ENST00000616944 WDR7Q9Y4E6 1490 aa23.39■■□□□ 1.33
CBWD1-225ENST00000616944 RRBP1Q9P2E9 1410 aaKnown RBP23.38■■□□□ 1.33
CBWD1-225ENST00000616944 MAPKBP1O60336 1514 aa23.37■■□□□ 1.33
CBWD1-225ENST00000616944 TRIM26Q12899 539 aaPredicted RBP23.37■■□□□ 1.33
CBWD1-225ENST00000616944 CDC42BPAQ5VT25 1732 aa23.37■■□□□ 1.33
CBWD1-225ENST00000616944 ASXL2Q76L83 1435 aa23.36■■□□□ 1.33
CBWD1-225ENST00000616944 ITSN2Q9NZM3 1697 aa23.36■■□□□ 1.33
CBWD1-225ENST00000616944 MYOM3Q5VTT5 1437 aa23.35■■□□□ 1.33
CBWD1-225ENST00000616944 TTC37Q6PGP7 1564 aa23.34■■□□□ 1.33
CBWD1-225ENST00000616944 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.34■■□□□ 1.33
CBWD1-225ENST00000616944 NPM1P06748 294 aaKnown RBP eCLIP23.31■■□□□ 1.32
CBWD1-225ENST00000616944 FGD6Q6ZV73 1430 aa23.31■■□□□ 1.32
CBWD1-225ENST00000616944 PREX2Q70Z35 1606 aa23.3■■□□□ 1.32
CBWD1-225ENST00000616944 MYO5CQ9NQX4 1742 aa23.29■■□□□ 1.32
CBWD1-225ENST00000616944 ABCA9Q8IUA7 1624 aa23.29■■□□□ 1.32
CBWD1-225ENST00000616944 GPATCH8Q9UKJ3 1502 aaKnown RBP23.29■■□□□ 1.32
CBWD1-225ENST00000616944 CDC42BPBQ9Y5S2 1711 aa23.28■■□□□ 1.32
CBWD1-225ENST00000616944 CCNB3Q8WWL7 1395 aa23.27■■□□□ 1.32
CBWD1-225ENST00000616944 MIA2Q96PC5 1412 aa23.27■■□□□ 1.31
CBWD1-225ENST00000616944 PTPN23Q9H3S7 1636 aa23.26■■□□□ 1.31
CBWD1-225ENST00000616944 TCOF1Q13428 1488 aaKnown RBP23.23■■□□□ 1.31
CBWD1-225ENST00000616944 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.22■■□□□ 1.31
CBWD1-225ENST00000616944 KCNH8Q96L42 1107 aa23.21■■□□□ 1.31
CBWD1-225ENST00000616944 ARAP3Q8WWN8 1544 aa23.2■■□□□ 1.3
CBWD1-225ENST00000616944 PCGF6Q9BYE7 350 aa23.19■■□□□ 1.3
CBWD1-225ENST00000616944 DIP2BQ9P265 1576 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms