RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 WDR97A6NE52 1622 aa17.28■□□□□ 0.36
PCDHGA9-202ENST00000616887 KANK4Q5T7N3 995 aaPredicted RBP17.28■□□□□ 0.36
PCDHGA9-202ENST00000616887 TARBP1Q13395 1621 aaKnown RBP17.27■□□□□ 0.36
PCDHGA9-202ENST00000616887 HNRNPUL2Q1KMD3 747 aaKnown RBP17.27■□□□□ 0.36
PCDHGA9-202ENST00000616887 GTF3C3Q9Y5Q9 886 aa17.26■□□□□ 0.35
PCDHGA9-202ENST00000616887 TDRD9Q8NDG6 1382 aaKnown RBP17.26■□□□□ 0.35
PCDHGA9-202ENST00000616887 ZNF608Q9ULD9 1512 aaPredicted RBP17.23■□□□□ 0.35
PCDHGA9-202ENST00000616887 P3H3Q8IVL6 736 aa17.22■□□□□ 0.35
PCDHGA9-202ENST00000616887 ABCA5Q8WWZ7 1642 aa17.2■□□□□ 0.34
PCDHGA9-202ENST00000616887 CUL7Q14999 1698 aa17.19■□□□□ 0.34
PCDHGA9-202ENST00000616887 AQRO60306 1485 aaKnown RBP eCLIP17.17■□□□□ 0.34
PCDHGA9-202ENST00000616887 GAPVD1Q14C86 1478 aa17.17■□□□□ 0.34
PCDHGA9-202ENST00000616887 EIF4G3O43432 1585 aaKnown RBP17.16■□□□□ 0.34
PCDHGA9-202ENST00000616887 FHOD3Q2V2M9 1422 aa17.11■□□□□ 0.33
PCDHGA9-202ENST00000616887 ATP1B4Q9UN42 357 aaPredicted RBP17.07■□□□□ 0.32
PCDHGA9-202ENST00000616887 CENPBP07199 599 aaPredicted RBP17.07■□□□□ 0.32
PCDHGA9-202ENST00000616887 PBRM1Q86U86 1689 aa17.06■□□□□ 0.32
PCDHGA9-202ENST00000616887 GRIN2BQ13224 1484 aa17.06■□□□□ 0.32
PCDHGA9-202ENST00000616887 PCF11O94913 1555 aaKnown RBP17.04■□□□□ 0.32
PCDHGA9-202ENST00000616887 TIAM1Q13009 1591 aa17.02■□□□□ 0.31
PCDHGA9-202ENST00000616887 FHAD1B1AJZ9 1412 aa17.01■□□□□ 0.31
PCDHGA9-202ENST00000616887 SNAPC4Q5SXM2 1469 aa17.01■□□□□ 0.31
PCDHGA9-202ENST00000616887 CTTNBP2Q8WZ74 1663 aa17.01■□□□□ 0.31
PCDHGA9-202ENST00000616887 ITGAEP38570 1179 aa17■□□□□ 0.31
PCDHGA9-202ENST00000616887 RRBP1Q9P2E9 1410 aaKnown RBP16.99■□□□□ 0.31
PCDHGA9-202ENST00000616887 ADAMTS12P58397 1594 aa16.97■□□□□ 0.31
PCDHGA9-202ENST00000616887 MAGI1Q96QZ7 1491 aaPredicted RBP16.97■□□□□ 0.31
PCDHGA9-202ENST00000616887 LRRC9Q6ZRR7 1453 aa16.96■□□□□ 0.31
PCDHGA9-202ENST00000616887 CCNB3Q8WWL7 1395 aa16.96■□□□□ 0.31
PCDHGA9-202ENST00000616887 EFCAB5A4FU69 1503 aa16.95■□□□□ 0.3
PCDHGA9-202ENST00000616887 PHLDB1Q86UU1 1377 aa16.95■□□□□ 0.3
PCDHGA9-202ENST00000616887 FBLN2P98095 1184 aa16.93■□□□□ 0.3
PCDHGA9-202ENST00000616887 MAP3K1Q13233 1512 aa16.91■□□□□ 0.3
PCDHGA9-202ENST00000616887 SYNJ2O15056 1496 aa16.91■□□□□ 0.3
PCDHGA9-202ENST00000616887 CHD1O14646 1710 aa16.9■□□□□ 0.3
PCDHGA9-202ENST00000616887 CHMP7Q8WUX9 453 aaPredicted RBP16.9■□□□□ 0.3
PCDHGA9-202ENST00000616887 FYCO1Q9BQS8 1478 aa16.9■□□□□ 0.3
PCDHGA9-202ENST00000616887 CASKIN1Q8WXD9 1431 aa16.9■□□□□ 0.3
PCDHGA9-202ENST00000616887 CFAP43Q8NDM7 1665 aa16.89■□□□□ 0.29
PCDHGA9-202ENST00000616887 DIEXFQ68CQ4 756 aaKnown RBP16.89■□□□□ 0.29
PCDHGA9-202ENST00000616887 SAMD9Q5K651 1589 aa16.88■□□□□ 0.29
PCDHGA9-202ENST00000616887 FMN1Q68DA7 1419 aa16.86■□□□□ 0.29
PCDHGA9-202ENST00000616887 DHX57Q6P158 1386 aaKnown RBP16.85■□□□□ 0.29
PCDHGA9-202ENST00000616887 FAM50AQ14320 339 aaKnown RBP16.85■□□□□ 0.29
PCDHGA9-202ENST00000616887 GRIN2AQ12879 1464 aa16.84■□□□□ 0.29
PCDHGA9-202ENST00000616887 ARID3CA6NKF2 412 aa16.82■□□□□ 0.28
PCDHGA9-202ENST00000616887 LRRIQ1Q96JM4 1722 aa16.81■□□□□ 0.28
PCDHGA9-202ENST00000616887 SLC24A1O60721 1099 aa16.81■□□□□ 0.28
PCDHGA9-202ENST00000616887 OSCARQ8IYS5 282 aa16.81■□□□□ 0.28
PCDHGA9-202ENST00000616887 IQGAP2Q13576 1575 aa16.8■□□□□ 0.28
PCDHGA9-202ENST00000616887 KIAA0586Q9BVV6 1533 aa16.78■□□□□ 0.28
PCDHGA9-202ENST00000616887 MTUS2Q5JR59 1369 aa16.77■□□□□ 0.28
PCDHGA9-202ENST00000616887 RAB3GAP2Q9H2M9 1393 aa16.77■□□□□ 0.27
PCDHGA9-202ENST00000616887 BCL11AQ9H165 835 aa16.77■□□□□ 0.27
PCDHGA9-202ENST00000616887 CEP170Q5SW79 1584 aa16.75■□□□□ 0.27
PCDHGA9-202ENST00000616887 NUP160Q12769 1436 aa16.74■□□□□ 0.27
PCDHGA9-202ENST00000616887 MAGI3Q5TCQ9 1506 aa16.73■□□□□ 0.27
PCDHGA9-202ENST00000616887 UGGT2Q9NYU1 1516 aa16.73■□□□□ 0.27
PCDHGA9-202ENST00000616887 YTHDC1Q96MU7 727 aaKnown RBP16.71■□□□□ 0.27
PCDHGA9-202ENST00000616887 FGD6Q6ZV73 1430 aa16.7■□□□□ 0.26
PCDHGA9-202ENST00000616887 ZNF316A6NFI3 1004 aaPredicted RBP16.7■□□□□ 0.26
PCDHGA9-202ENST00000616887 CLASP1Q7Z460 1538 aa16.7■□□□□ 0.26
PCDHGA9-202ENST00000616887 NCOA2Q15596 1464 aa16.69■□□□□ 0.26
PCDHGA9-202ENST00000616887 CDK13Q14004 1512 aaKnown RBP16.69■□□□□ 0.26
PCDHGA9-202ENST00000616887 SETD5Q9C0A6 1442 aa16.67■□□□□ 0.26
PCDHGA9-202ENST00000616887 DISP1Q96F81 1524 aa16.67■□□□□ 0.26
PCDHGA9-202ENST00000616887 EPRSP07814 1512 aaKnown RBP16.65■□□□□ 0.26
PCDHGA9-202ENST00000616887 PTPRKQ15262 1439 aa16.64■□□□□ 0.26
PCDHGA9-202ENST00000616887 CLSPNQ9HAW4 1339 aa16.64■□□□□ 0.25
PCDHGA9-202ENST00000616887 MAPKBP1O60336 1514 aa16.64■□□□□ 0.25
PCDHGA9-202ENST00000616887 KIAA0556O60303 1618 aa16.64■□□□□ 0.25
PCDHGA9-202ENST00000616887 EHBP1L1Q8N3D4 1523 aa16.63■□□□□ 0.25
PCDHGA9-202ENST00000616887 HECW1Q76N89 1606 aa16.63■□□□□ 0.25
PCDHGA9-202ENST00000616887 MYOM3Q5VTT5 1437 aa16.62■□□□□ 0.25
PCDHGA9-202ENST00000616887 DNAJC5Q9H3Z4 198 aa16.61■□□□□ 0.25
PCDHGA9-202ENST00000616887 CCDC18Q5T9S5 1454 aa16.61■□□□□ 0.25
PCDHGA9-202ENST00000616887 SUPT6HQ7KZ85 1726 aaKnown RBP16.6■□□□□ 0.25
PCDHGA9-202ENST00000616887 CARMIL2Q6F5E8 1435 aa16.6■□□□□ 0.25
PCDHGA9-202ENST00000616887 JPH4Q96JJ6 628 aa16.59■□□□□ 0.25
PCDHGA9-202ENST00000616887 SHROOM2Q13796 1616 aa16.58■□□□□ 0.24
PCDHGA9-202ENST00000616887 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.57■□□□□ 0.24
PCDHGA9-202ENST00000616887 ARHGEF11O15085 1522 aa16.57■□□□□ 0.24
PCDHGA9-202ENST00000616887 NUP153P49790 1475 aaKnown RBP16.57■□□□□ 0.24
PCDHGA9-202ENST00000616887 SIN3AQ96ST3 1273 aa16.57■□□□□ 0.24
PCDHGA9-202ENST00000616887 PLB1Q6P1J6 1458 aa16.55■□□□□ 0.24
PCDHGA9-202ENST00000616887 ANP32EQ9BTT0 268 aa16.54■□□□□ 0.24
PCDHGA9-202ENST00000616887 CHIC2Q9UKJ5 165 aa16.54■□□□□ 0.24
PCDHGA9-202ENST00000616887 PRG4Q92954 1404 aaPredicted RBP16.54■□□□□ 0.24
PCDHGA9-202ENST00000616887 PTPN23Q9H3S7 1636 aa16.53■□□□□ 0.24
PCDHGA9-202ENST00000616887 ERCC6L2Q5T890 1561 aa16.53■□□□□ 0.24
PCDHGA9-202ENST00000616887 RIMBP3CA6NJZ7 1639 aa16.52■□□□□ 0.23
PCDHGA9-202ENST00000616887 RIMBP3BA6NNM3 1639 aa16.52■□□□□ 0.23
PCDHGA9-202ENST00000616887 RIMBP3Q9UFD9 1639 aa16.52■□□□□ 0.23
PCDHGA9-202ENST00000616887 RAPGEF6Q8TEU7 1601 aa16.51■□□□□ 0.23
PCDHGA9-202ENST00000616887 RRP7BPQ9NSQ0 103 aa16.5■□□□□ 0.23
PCDHGA9-202ENST00000616887 HFM1A2PYH4 1435 aa16.49■□□□□ 0.23
PCDHGA9-202ENST00000616887 NAIPQ13075 1403 aa16.49■□□□□ 0.23
PCDHGA9-202ENST00000616887 PRKCSHP14314 528 aaPredicted RBP16.48■□□□□ 0.23
PCDHGA9-202ENST00000616887 ZNF644Q9H582 1327 aaPredicted RBP16.48■□□□□ 0.23
PCDHGA9-202ENST00000616887 MIER1Q8N108 512 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms