RNA–Protein interactions for RNA: ENST00000616814.4

INO80-211, Transcript of INO80 complex subunit, humanhuman

TSL 5 BASIC

Gene INO80, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80-211ENST00000616814 RAB3GAP2Q9H2M9 1393 aa16.62■□□□□ 0.25
INO80-211ENST00000616814 EIF4G2P78344 907 aaKnown RBP eCLIP16.62■□□□□ 0.25
INO80-211ENST00000616814 NBR1Q14596 966 aa16.62■□□□□ 0.25
INO80-211ENST00000616814 NPM2Q86SE8 214 aaKnown RBP16.6■□□□□ 0.25
INO80-211ENST00000616814 CCDC136Q96JN2 1154 aa16.59■□□□□ 0.25
INO80-211ENST00000616814 CCER2I3L3R5 266 aa16.59■□□□□ 0.25
INO80-211ENST00000616814 MYT1LQ9UL68 1186 aa16.59■□□□□ 0.25
INO80-211ENST00000616814 BCL11AQ9H165 835 aa16.59■□□□□ 0.25
INO80-211ENST00000616814 RRP7BPQ9NSQ0 103 aa16.59■□□□□ 0.25
INO80-211ENST00000616814 TIMELESSQ9UNS1 1208 aa16.59■□□□□ 0.25
INO80-211ENST00000616814 SETD5Q9C0A6 1442 aa16.58■□□□□ 0.25
INO80-211ENST00000616814 SMARCA4P51532 1647 aa16.55■□□□□ 0.24
INO80-211ENST00000616814 SMARCA2P51531 1590 aa16.55■□□□□ 0.24
INO80-211ENST00000616814 ZBTB47Q9UFB7 747 aaPredicted RBP16.51■□□□□ 0.23
INO80-211ENST00000616814 TMC1Q8TDI8 760 aa16.5■□□□□ 0.23
INO80-211ENST00000616814 PPP4R2Q9NY27 417 aa16.5■□□□□ 0.23
INO80-211ENST00000616814 PPP1R15AO75807 674 aaPredicted RBP16.5■□□□□ 0.23
INO80-211ENST00000616814 SALL2Q9Y467 1007 aaPredicted RBP16.5■□□□□ 0.23
INO80-211ENST00000616814 ZNF777Q9ULD5 760 aaPredicted RBP16.49■□□□□ 0.23
INO80-211ENST00000616814 B4GALNT3Q6L9W6 998 aa16.48■□□□□ 0.23
INO80-211ENST00000616814 SENP3-EIF4A1A0A087X0R7 540 aa16.47■□□□□ 0.23
INO80-211ENST00000616814 CARMIL1Q5VZK9 1371 aa16.47■□□□□ 0.23
INO80-211ENST00000616814 FHAD1B1AJZ9 1412 aa16.46■□□□□ 0.23
INO80-211ENST00000616814 CUX2O14529 1486 aa16.45■□□□□ 0.22
INO80-211ENST00000616814 SLC4A1APQ9BWU0 796 aaKnown RBP16.42■□□□□ 0.22
INO80-211ENST00000616814 KIF21BO75037 1637 aa16.41■□□□□ 0.22
INO80-211ENST00000616814 HSPA5P11021 654 aaKnown RBP16.38■□□□□ 0.21
INO80-211ENST00000616814 FBLN2P98095 1184 aa16.36■□□□□ 0.21
INO80-211ENST00000616814 ATAD2BQ9ULI0 1458 aa16.36■□□□□ 0.21
INO80-211ENST00000616814 ARHGAP35Q9NRY4 1499 aa16.35■□□□□ 0.21
INO80-211ENST00000616814 NOP58Q9Y2X3 529 aaKnown RBP16.35■□□□□ 0.21
INO80-211ENST00000616814 KDM2AQ9Y2K7 1162 aa16.34■□□□□ 0.21
INO80-211ENST00000616814 ERICH6BQ5W0A0 696 aa16.31■□□□□ 0.2
INO80-211ENST00000616814 DEKP35659 375 aaKnown RBP16.29■□□□□ 0.2
INO80-211ENST00000616814 SYNJ1O43426 1573 aa16.28■□□□□ 0.2
INO80-211ENST00000616814 FOXD1Q16676 465 aa16.26■□□□□ 0.19
INO80-211ENST00000616814 ARAP1Q96P48 1450 aa16.26■□□□□ 0.19
INO80-211ENST00000616814 RRBP1Q9P2E9 1410 aaKnown RBP16.25■□□□□ 0.19
INO80-211ENST00000616814 CANXP27824 592 aaKnown RBP16.24■□□□□ 0.19
INO80-211ENST00000616814 EIF5BO60841 1220 aaKnown RBP16.23■□□□□ 0.19
INO80-211ENST00000616814 FHOD3Q2V2M9 1422 aa16.23■□□□□ 0.19
INO80-211ENST00000616814 L3MBTL2Q969R5 705 aa16.2■□□□□ 0.18
INO80-211ENST00000616814 PHLDB1Q86UU1 1377 aa16.2■□□□□ 0.18
INO80-211ENST00000616814 TSPY4P0CV99 314 aa16.19■□□□□ 0.18
INO80-211ENST00000616814 TSPY10P0CW01 314 aa16.19■□□□□ 0.18
INO80-211ENST00000616814 CARD11Q9BXL7 1154 aa16.19■□□□□ 0.18
INO80-211ENST00000616814 MPHOSPH9Q99550 1183 aa16.19■□□□□ 0.18
INO80-211ENST00000616814 LAS1LQ9Y4W2 734 aaKnown RBP16.19■□□□□ 0.18
INO80-211ENST00000616814 FANCIQ9NVI1 1328 aa16.18■□□□□ 0.18
INO80-211ENST00000616814 FMN1Q68DA7 1419 aa16.17■□□□□ 0.18
INO80-211ENST00000616814 IGF1RP08069 1367 aa16.15■□□□□ 0.18
INO80-211ENST00000616814 NEFMP07197 916 aa16.15■□□□□ 0.18
INO80-211ENST00000616814 CFDP1Q9UEE9 299 aaPredicted RBP16.15■□□□□ 0.18
INO80-211ENST00000616814 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.15■□□□□ 0.187e-7■■■□□ 17.2
INO80-211ENST00000616814 PRXQ9BXM0 1461 aa16.15■□□□□ 0.18
INO80-211ENST00000616814 PRKRIP1Q9H875 184 aaPredicted RBP16.14■□□□□ 0.17
INO80-211ENST00000616814 RTN4Q9NQC3 1192 aaKnown RBP16.14■□□□□ 0.17
INO80-211ENST00000616814 ERICH3Q5RHP9 1530 aa16.13■□□□□ 0.17
INO80-211ENST00000616814 WDR43Q15061 677 aaKnown RBP eCLIP16.13■□□□□ 0.17
INO80-211ENST00000616814 RGL3Q3MIN7 710 aa16.12■□□□□ 0.17
INO80-211ENST00000616814 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.12■□□□□ 0.17
INO80-211ENST00000616814 LRRC9Q6ZRR7 1453 aa16.11■□□□□ 0.17
INO80-211ENST00000616814 DDRGK1Q96HY6 314 aa16.11■□□□□ 0.17
INO80-211ENST00000616814 CCDC18Q5T9S5 1454 aa16.11■□□□□ 0.17
INO80-211ENST00000616814 PPM1GO15355 546 aaPredicted RBP16.11■□□□□ 0.17
INO80-211ENST00000616814 NUDCQ9Y266 331 aa16.09■□□□□ 0.17
INO80-211ENST00000616814 IPO9Q96P70 1041 aaKnown RBP16.07■□□□□ 0.16
INO80-211ENST00000616814 ZBED9Q6R2W3 1325 aa16.07■□□□□ 0.16
INO80-211ENST00000616814 WDR97A6NE52 1622 aa16.07■□□□□ 0.16
INO80-211ENST00000616814 CADPSQ9ULU8 1353 aa16.06■□□□□ 0.16
INO80-211ENST00000616814 TDRD9Q8NDG6 1382 aaKnown RBP16.05■□□□□ 0.16
INO80-211ENST00000616814 UPF2Q9HAU5 1272 aaKnown RBP16.05■□□□□ 0.16
INO80-211ENST00000616814 WASHC2AQ641Q2 1341 aa16.04■□□□□ 0.16
INO80-211ENST00000616814 EIF4G1Q04637 1599 aaKnown RBP16.04■□□□□ 0.16
INO80-211ENST00000616814 PKD2Q13563 968 aa16.03■□□□□ 0.16
INO80-211ENST00000616814 DCAF11Q8TEB1 546 aa16.03■□□□□ 0.16
INO80-211ENST00000616814 FGD6Q6ZV73 1430 aa16.02■□□□□ 0.16
INO80-211ENST00000616814 UACAQ9BZF9 1416 aa16.02■□□□□ 0.16
INO80-211ENST00000616814 TOP2BQ02880 1626 aa16.02■□□□□ 0.15
INO80-211ENST00000616814 ARXQ96QS3 562 aa16.02■□□□□ 0.15
INO80-211ENST00000616814 PLEKHD1A6NEE1 506 aa16.01■□□□□ 0.15
INO80-211ENST00000616814 CC2D1BQ5T0F9 858 aaKnown RBP16.01■□□□□ 0.15
INO80-211ENST00000616814 RCAN3Q9UKA8 241 aa16.01■□□□□ 0.15
INO80-211ENST00000616814 CHMP7Q8WUX9 453 aaPredicted RBP16■□□□□ 0.15
INO80-211ENST00000616814 RGS3P49796 1198 aa15.99■□□□□ 0.15
INO80-211ENST00000616814 TCERG1O14776 1098 aaKnown RBP15.99■□□□□ 0.15
INO80-211ENST00000616814 MSH5O43196 834 aa15.97■□□□□ 0.15
INO80-211ENST00000616814 KNSTRNQ9Y448 316 aa15.96■□□□□ 0.14
INO80-211ENST00000616814 CCDC7Q96M83 1385 aa15.95■□□□□ 0.14
INO80-211ENST00000616814 FGD5Q6ZNL6 1462 aa15.95■□□□□ 0.14
INO80-211ENST00000616814 CCDC184Q52MB2 194 aa15.94■□□□□ 0.14
INO80-211ENST00000616814 TIAM1Q13009 1591 aa15.93■□□□□ 0.14
INO80-211ENST00000616814 CNTLNQ9NXG0 1405 aa15.93■□□□□ 0.14
INO80-211ENST00000616814 KIF7Q2M1P5 1343 aa15.93■□□□□ 0.14
INO80-211ENST00000616814 RALBP1Q15311 655 aa15.92■□□□□ 0.14
INO80-211ENST00000616814 CUX1P39880 1505 aa15.92■□□□□ 0.14
INO80-211ENST00000616814 MYOM3Q5VTT5 1437 aa15.9■□□□□ 0.14
INO80-211ENST00000616814 BECN1Q14457 450 aa15.9■□□□□ 0.14
INO80-211ENST00000616814 CHGAP10645 457 aaKnown RBP15.89■□□□□ 0.13
INO80-211ENST00000616814 CASKIN1Q8WXD9 1431 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms