RNA–Protein interactions for RNA: ENST00000616545.4

TARDBP-217, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-217ENST00000616545 EHMT2Q96KQ7 1210 aa18.76■□□□□ 0.59
TARDBP-217ENST00000616545 CTTNBP2Q8WZ74 1663 aa18.73■□□□□ 0.59
TARDBP-217ENST00000616545 CEP170Q5SW79 1584 aa18.72■□□□□ 0.59
TARDBP-217ENST00000616545 OSCARQ8IYS5 282 aa18.72■□□□□ 0.59
TARDBP-217ENST00000616545 IQGAP2Q13576 1575 aa18.7■□□□□ 0.58
TARDBP-217ENST00000616545 CEP162Q5TB80 1403 aa18.66■□□□□ 0.58
TARDBP-217ENST00000616545 CLASP1Q7Z460 1538 aa18.64■□□□□ 0.58
TARDBP-217ENST00000616545 UGGT2Q9NYU1 1516 aa18.64■□□□□ 0.58
TARDBP-217ENST00000616545 JPH4Q96JJ6 628 aa18.64■□□□□ 0.57
TARDBP-217ENST00000616545 CLIP1P30622 1438 aa18.63■□□□□ 0.57
TARDBP-217ENST00000616545 EFCAB5A4FU69 1503 aa18.63■□□□□ 0.57
TARDBP-217ENST00000616545 CARMIL2Q6F5E8 1435 aa18.58■□□□□ 0.57
TARDBP-217ENST00000616545 SHROOM2Q13796 1616 aa18.58■□□□□ 0.56
TARDBP-217ENST00000616545 SAMD9Q5K651 1589 aa18.55■□□□□ 0.56
TARDBP-217ENST00000616545 ARHGAP35Q9NRY4 1499 aa18.55■□□□□ 0.56
TARDBP-217ENST00000616545 PRG4Q92954 1404 aaPredicted RBP18.52■□□□□ 0.56
TARDBP-217ENST00000616545 RANGAP1P46060 587 aaPredicted RBP18.52■□□□□ 0.56
TARDBP-217ENST00000616545 DISP1Q96F81 1524 aa18.52■□□□□ 0.56
TARDBP-217ENST00000616545 KIAA0556O60303 1618 aa18.49■□□□□ 0.55
TARDBP-217ENST00000616545 FMN1Q68DA7 1419 aa18.48■□□□□ 0.55
TARDBP-217ENST00000616545 ARAP1Q96P48 1450 aa18.46■□□□□ 0.54
TARDBP-217ENST00000616545 FHOD3Q2V2M9 1422 aa18.43■□□□□ 0.54
TARDBP-217ENST00000616545 VPS8Q8N3P4 1428 aa18.43■□□□□ 0.54
TARDBP-217ENST00000616545 P3H3Q8IVL6 736 aa18.43■□□□□ 0.54
TARDBP-217ENST00000616545 PTPRGP23470 1445 aa18.4■□□□□ 0.54
TARDBP-217ENST00000616545 CASKIN1Q8WXD9 1431 aa18.35■□□□□ 0.53
TARDBP-217ENST00000616545 ERCC6L2Q5T890 1561 aa18.34■□□□□ 0.53
TARDBP-217ENST00000616545 ARHGEF11O15085 1522 aa18.33■□□□□ 0.53
TARDBP-217ENST00000616545 FYCO1Q9BQS8 1478 aa18.33■□□□□ 0.52
TARDBP-217ENST00000616545 UACAQ9BZF9 1416 aa18.3■□□□□ 0.52
TARDBP-217ENST00000616545 ABCA8O94911 1581 aa18.29■□□□□ 0.52
TARDBP-217ENST00000616545 APLP2Q06481 763 aa18.28■□□□□ 0.52
TARDBP-217ENST00000616545 RAPGEF6Q8TEU7 1601 aa18.27■□□□□ 0.52
TARDBP-217ENST00000616545 UHRF1BP1LA0JNW5 1464 aa18.27■□□□□ 0.52
TARDBP-217ENST00000616545 HECW1Q76N89 1606 aa18.27■□□□□ 0.51
TARDBP-217ENST00000616545 MAP3K1Q13233 1512 aa18.26■□□□□ 0.51
TARDBP-217ENST00000616545 PCF11O94913 1555 aaKnown RBP18.25■□□□□ 0.51
TARDBP-217ENST00000616545 RIMBP3CA6NJZ7 1639 aa18.25■□□□□ 0.51
TARDBP-217ENST00000616545 RIMBP3BA6NNM3 1639 aa18.25■□□□□ 0.51
TARDBP-217ENST00000616545 RIMBP3Q9UFD9 1639 aa18.25■□□□□ 0.51
TARDBP-217ENST00000616545 CCDC18Q5T9S5 1454 aa18.25■□□□□ 0.51
TARDBP-217ENST00000616545 PLB1Q6P1J6 1458 aa18.25■□□□□ 0.51
TARDBP-217ENST00000616545 TTBK1Q5TCY1 1321 aaPredicted RBP18.24■□□□□ 0.51
TARDBP-217ENST00000616545 ABCC2Q92887 1545 aa18.23■□□□□ 0.51
TARDBP-217ENST00000616545 ATP1B4Q9UN42 357 aaPredicted RBP18.21■□□□□ 0.51
TARDBP-217ENST00000616545 NUP153P49790 1475 aaKnown RBP18.2■□□□□ 0.5
TARDBP-217ENST00000616545 EPRSP07814 1512 aaKnown RBP18.19■□□□□ 0.5
TARDBP-217ENST00000616545 DNAJC5Q9H3Z4 198 aa18.19■□□□□ 0.5
TARDBP-217ENST00000616545 CDK11AQ9UQ88 783 aaPredicted RBP18.18■□□□□ 0.5
TARDBP-217ENST00000616545 KDM5BQ9UGL1 1544 aa18.15■□□□□ 0.5
TARDBP-217ENST00000616545 TIAM1Q13009 1591 aa18.14■□□□□ 0.49
TARDBP-217ENST00000616545 CYB5RLQ6IPT4 315 aa18.14■□□□□ 0.49
TARDBP-217ENST00000616545 ATP10BO94823 1461 aa18.14■□□□□ 0.49
TARDBP-217ENST00000616545 NPM1P06748 294 aaKnown RBP eCLIP18.13■□□□□ 0.49
TARDBP-217ENST00000616545 ADCY10Q96PN6 1610 aa18.12■□□□□ 0.49
TARDBP-217ENST00000616545 CFAP43Q8NDM7 1665 aa18.12■□□□□ 0.49
TARDBP-217ENST00000616545 PLEKHD1A6NEE1 506 aa18.1■□□□□ 0.49
TARDBP-217ENST00000616545 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.1■□□□□ 0.49
TARDBP-217ENST00000616545 HNRNPUL2Q1KMD3 747 aaKnown RBP18.1■□□□□ 0.49
TARDBP-217ENST00000616545 CDK13Q14004 1512 aaKnown RBP18.08■□□□□ 0.49
TARDBP-217ENST00000616545 LRRC9Q6ZRR7 1453 aa18.08■□□□□ 0.49
TARDBP-217ENST00000616545 MTUS2Q5JR59 1369 aa18.08■□□□□ 0.49
TARDBP-217ENST00000616545 LRRIQ1Q96JM4 1722 aa18.08■□□□□ 0.48
TARDBP-217ENST00000616545 EHBP1L1Q8N3D4 1523 aa18.05■□□□□ 0.48
TARDBP-217ENST00000616545 TROQ12816 1431 aaPredicted RBP18.05■□□□□ 0.48
TARDBP-217ENST00000616545 ZCCHC11Q5TAX3 1644 aaKnown RBP18.05■□□□□ 0.48
TARDBP-217ENST00000616545 ARID3CA6NKF2 412 aa18.04■□□□□ 0.48
TARDBP-217ENST00000616545 KANK4Q5T7N3 995 aaPredicted RBP18.03■□□□□ 0.48
TARDBP-217ENST00000616545 MAPKBP1O60336 1514 aa17.99■□□□□ 0.47
TARDBP-217ENST00000616545 WDR7Q9Y4E6 1490 aa17.98■□□□□ 0.47
TARDBP-217ENST00000616545 MAGI3Q5TCQ9 1506 aa17.98■□□□□ 0.47
TARDBP-217ENST00000616545 ASXL2Q76L83 1435 aa17.97■□□□□ 0.47
TARDBP-217ENST00000616545 SUPT6HQ7KZ85 1726 aaKnown RBP17.96■□□□□ 0.47
TARDBP-217ENST00000616545 KIF14Q15058 1648 aa17.94■□□□□ 0.46
TARDBP-217ENST00000616545 NCOA2Q15596 1464 aa17.93■□□□□ 0.46
TARDBP-217ENST00000616545 PPARGC1BQ86YN6 1023 aaKnown RBP17.91■□□□□ 0.46
TARDBP-217ENST00000616545 CCNB3Q8WWL7 1395 aa17.88■□□□□ 0.45
TARDBP-217ENST00000616545 ABCC10Q5T3U5 1492 aa17.88■□□□□ 0.45
TARDBP-217ENST00000616545 KCNH8Q96L42 1107 aa17.87■□□□□ 0.45
TARDBP-217ENST00000616545 MYOM3Q5VTT5 1437 aa17.86■□□□□ 0.45
TARDBP-217ENST00000616545 MIA2Q96PC5 1412 aa17.86■□□□□ 0.45
TARDBP-217ENST00000616545 PHLDB1Q86UU1 1377 aa17.85■□□□□ 0.45
TARDBP-217ENST00000616545 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.84■□□□□ 0.45
TARDBP-217ENST00000616545 ABCA9Q8IUA7 1624 aa17.83■□□□□ 0.45
TARDBP-217ENST00000616545 GLI2P10070 1586 aa17.83■□□□□ 0.45
TARDBP-217ENST00000616545 ARAP3Q8WWN8 1544 aa17.82■□□□□ 0.44
TARDBP-217ENST00000616545 GPATCH8Q9UKJ3 1502 aaKnown RBP17.82■□□□□ 0.44
TARDBP-217ENST00000616545 ITSN2Q9NZM3 1697 aa17.82■□□□□ 0.44
TARDBP-217ENST00000616545 RRBP1Q9P2E9 1410 aaKnown RBP17.81■□□□□ 0.44
TARDBP-217ENST00000616545 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.81■□□□□ 0.44
TARDBP-217ENST00000616545 PLCH2O75038 1416 aa17.81■□□□□ 0.44
TARDBP-217ENST00000616545 FGD6Q6ZV73 1430 aa17.81■□□□□ 0.44
TARDBP-217ENST00000616545 TRIM26Q12899 539 aaPredicted RBP17.8■□□□□ 0.44
TARDBP-217ENST00000616545 CFDP1Q9UEE9 299 aaPredicted RBP17.8■□□□□ 0.44
TARDBP-217ENST00000616545 TTC37Q6PGP7 1564 aa17.78■□□□□ 0.44
TARDBP-217ENST00000616545 DIP2BQ9P265 1576 aa17.77■□□□□ 0.44
TARDBP-217ENST00000616545 PREX2Q70Z35 1606 aa17.76■□□□□ 0.43
TARDBP-217ENST00000616545 MYO5CQ9NQX4 1742 aa17.76■□□□□ 0.43
TARDBP-217ENST00000616545 CD109Q6YHK3 1445 aa17.76■□□□□ 0.43
TARDBP-217ENST00000616545 FAM69CQ0P6D2 419 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms