RNA–Protein interactions for RNA: ENST00000615940.4

LRTOMT-222, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 5 BASIC

Gene LRTOMT, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-222ENST00000615940 TARBP1Q13395 1621 aaKnown RBP14.45□□□□□ -0.1
LRTOMT-222ENST00000615940 WDR97A6NE52 1622 aa14.41□□□□□ -0.1
LRTOMT-222ENST00000615940 SOGA1O94964 1423 aa14.41□□□□□ -0.1
LRTOMT-222ENST00000615940 TAF7LQ5H9L4 462 aa14.4□□□□□ -0.1
LRTOMT-222ENST00000615940 IFT140Q96RY7 1462 aa14.4□□□□□ -0.1
LRTOMT-222ENST00000615940 ZNF608Q9ULD9 1512 aaPredicted RBP14.4□□□□□ -0.1
LRTOMT-222ENST00000615940 LOC105371045A0A1W2PR82 267 aa14.38□□□□□ -0.11
LRTOMT-222ENST00000615940 EIF4G3O43432 1585 aaKnown RBP14.36□□□□□ -0.11
LRTOMT-222ENST00000615940 ANP32EQ9BTT0 268 aa14.35□□□□□ -0.11
LRTOMT-222ENST00000615940 AQRO60306 1485 aaKnown RBP eCLIP14.34□□□□□ -0.11
LRTOMT-222ENST00000615940 TMEM132AQ24JP5 1023 aa14.33□□□□□ -0.11
LRTOMT-222ENST00000615940 TRIM41Q8WV44 630 aa14.33□□□□□ -0.11
LRTOMT-222ENST00000615940 CHMP4AQ9BY43 222 aa14.33□□□□□ -0.11
LRTOMT-222ENST00000615940 TDRD9Q8NDG6 1382 aaKnown RBP14.33□□□□□ -0.12
LRTOMT-222ENST00000615940 ABCA10Q8WWZ4 1543 aa14.33□□□□□ -0.12
LRTOMT-222ENST00000615940 BRD2P25440 801 aaKnown RBP14.31□□□□□ -0.12
LRTOMT-222ENST00000615940 PLCB2Q00722 1185 aa14.31□□□□□ -0.12
LRTOMT-222ENST00000615940 PBRM1Q86U86 1689 aa14.31□□□□□ -0.12
LRTOMT-222ENST00000615940 ABCA5Q8WWZ7 1642 aa14.29□□□□□ -0.12
LRTOMT-222ENST00000615940 AEBP2Q6ZN18 517 aaPredicted RBP14.28□□□□□ -0.12
LRTOMT-222ENST00000615940 ANO8Q9HCE9 1232 aaPredicted RBP14.27□□□□□ -0.12
LRTOMT-222ENST00000615940 CDK11AQ9UQ88 783 aaPredicted RBP14.27□□□□□ -0.12
LRTOMT-222ENST00000615940 TRIM26Q12899 539 aaPredicted RBP14.27□□□□□ -0.13
LRTOMT-222ENST00000615940 GAPVD1Q14C86 1478 aa14.25□□□□□ -0.13
LRTOMT-222ENST00000615940 RUSC2Q8N2Y8 1516 aa14.23□□□□□ -0.13
LRTOMT-222ENST00000615940 CNKSR2Q8WXI2 1034 aa14.23□□□□□ -0.13
LRTOMT-222ENST00000615940 SAMD1Q6SPF0 538 aaPredicted RBP14.22□□□□□ -0.13
LRTOMT-222ENST00000615940 HAP1P54257 671 aaPredicted RBP14.21□□□□□ -0.13
LRTOMT-222ENST00000615940 FGD1P98174 961 aa14.21□□□□□ -0.13
LRTOMT-222ENST00000615940 CHD1O14646 1710 aa14.21□□□□□ -0.13
LRTOMT-222ENST00000615940 GRIN2BQ13224 1484 aa14.2□□□□□ -0.14
LRTOMT-222ENST00000615940 SNAPC4Q5SXM2 1469 aa14.2□□□□□ -0.14
LRTOMT-222ENST00000615940 KIF27Q86VH2 1401 aa14.18□□□□□ -0.14
LRTOMT-222ENST00000615940 CDK11BP21127 795 aaKnown RBP14.17□□□□□ -0.14
LRTOMT-222ENST00000615940 ERICH3Q5RHP9 1530 aa14.15□□□□□ -0.14
LRTOMT-222ENST00000615940 BCL11BQ9C0K0 894 aaPredicted RBP14.14□□□□□ -0.15
LRTOMT-222ENST00000615940 ADAMTS12P58397 1594 aa14.14□□□□□ -0.15
LRTOMT-222ENST00000615940 MAGI1Q96QZ7 1491 aaPredicted RBP14.14□□□□□ -0.15
LRTOMT-222ENST00000615940 FBLN2P98095 1184 aa14.12□□□□□ -0.15
LRTOMT-222ENST00000615940 IGF1RP08069 1367 aa14.12□□□□□ -0.15
LRTOMT-222ENST00000615940 DHX37Q8IY37 1157 aaKnown RBP14.12□□□□□ -0.15
LRTOMT-222ENST00000615940 CUL7Q14999 1698 aa14.09□□□□□ -0.15
LRTOMT-222ENST00000615940 SYNJ2O15056 1496 aa14.09□□□□□ -0.15
LRTOMT-222ENST00000615940 CHMP7Q8WUX9 453 aaPredicted RBP14.07□□□□□ -0.16
LRTOMT-222ENST00000615940 FHAD1B1AJZ9 1412 aa14.06□□□□□ -0.16
LRTOMT-222ENST00000615940 HSP90B1P14625 803 aaKnown RBP14.05□□□□□ -0.16
LRTOMT-222ENST00000615940 GRIN2AQ12879 1464 aa14.04□□□□□ -0.16
LRTOMT-222ENST00000615940 CARMIL1Q5VZK9 1371 aa14.04□□□□□ -0.16
LRTOMT-222ENST00000615940 ERICH6BQ5W0A0 696 aa14.02□□□□□ -0.16
LRTOMT-222ENST00000615940 CEP170Q5SW79 1584 aa14.01□□□□□ -0.17
LRTOMT-222ENST00000615940 EEA1Q15075 1411 aa14.01□□□□□ -0.17
LRTOMT-222ENST00000615940 ZNF326Q5BKZ1 582 aaKnown RBP14□□□□□ -0.17
LRTOMT-222ENST00000615940 OSCARQ8IYS5 282 aa14□□□□□ -0.17
LRTOMT-222ENST00000615940 PRXQ9BXM0 1461 aa13.98□□□□□ -0.17
LRTOMT-222ENST00000615940 RAPGEF2Q9Y4G8 1499 aa13.98□□□□□ -0.17
LRTOMT-222ENST00000615940 HMGB1P09429 215 aaKnown RBP13.97□□□□□ -0.17
LRTOMT-222ENST00000615940 RSPH4AQ5TD94 716 aa13.97□□□□□ -0.17
LRTOMT-222ENST00000615940 CLASP1Q7Z460 1538 aa13.95□□□□□ -0.18
LRTOMT-222ENST00000615940 NUP160Q12769 1436 aa13.95□□□□□ -0.18
LRTOMT-222ENST00000615940 CTTNBP2Q8WZ74 1663 aa13.94□□□□□ -0.18
LRTOMT-222ENST00000615940 UBTFP17480 764 aaKnown RBP13.94□□□□□ -0.18
LRTOMT-222ENST00000615940 KIF21BO75037 1637 aa13.93□□□□□ -0.18
LRTOMT-222ENST00000615940 BCCIPQ9P287 314 aaKnown RBP eCLIP13.92□□□□□ -0.18
LRTOMT-222ENST00000615940 AAMPQ13685 434 aa13.9□□□□□ -0.18
LRTOMT-222ENST00000615940 RSPH6AQ9H0K4 717 aa13.89□□□□□ -0.19
LRTOMT-222ENST00000615940 DNAJC5Q9H3Z4 198 aa13.89□□□□□ -0.19
LRTOMT-222ENST00000615940 SHROOM2Q13796 1616 aa13.87□□□□□ -0.19
LRTOMT-222ENST00000615940 VSIG10Q8N0Z9 540 aa13.87□□□□□ -0.19
LRTOMT-222ENST00000615940 IQGAP2Q13576 1575 aa13.86□□□□□ -0.19
LRTOMT-222ENST00000615940 ERCC6L2Q5T890 1561 aa13.86□□□□□ -0.19
LRTOMT-222ENST00000615940 KIAA0586Q9BVV6 1533 aa13.85□□□□□ -0.19
LRTOMT-222ENST00000615940 CLSPNQ9HAW4 1339 aa13.85□□□□□ -0.19
LRTOMT-222ENST00000615940 RIMBP3CA6NJZ7 1639 aa13.85□□□□□ -0.19
LRTOMT-222ENST00000615940 RIMBP3BA6NNM3 1639 aa13.85□□□□□ -0.19
LRTOMT-222ENST00000615940 RIMBP3Q9UFD9 1639 aa13.85□□□□□ -0.19
LRTOMT-222ENST00000615940 ZEB1P37275 1124 aaPredicted RBP13.84□□□□□ -0.19
LRTOMT-222ENST00000615940 GOLGA3Q08378 1498 aa13.84□□□□□ -0.19
LRTOMT-222ENST00000615940 ACIN1Q9UKV3 1341 aaKnown RBP13.84□□□□□ -0.19
LRTOMT-222ENST00000615940 ARHGEF11O15085 1522 aa13.83□□□□□ -0.2
LRTOMT-222ENST00000615940 JPH4Q96JJ6 628 aa13.82□□□□□ -0.2
LRTOMT-222ENST00000615940 PRG4Q92954 1404 aaPredicted RBP13.79□□□□□ -0.2
LRTOMT-222ENST00000615940 SALL2Q9Y467 1007 aaPredicted RBP13.78□□□□□ -0.2
LRTOMT-222ENST00000615940 IGSF3O75054 1194 aa13.76□□□□□ -0.21
LRTOMT-222ENST00000615940 CCDC136Q96JN2 1154 aa13.76□□□□□ -0.21
LRTOMT-222ENST00000615940 UGGT2Q9NYU1 1516 aa13.76□□□□□ -0.21
LRTOMT-222ENST00000615940 DISP1Q96F81 1524 aa13.75□□□□□ -0.21
LRTOMT-222ENST00000615940 NAP1L5Q96NT1 182 aaPredicted RBP13.74□□□□□ -0.21
LRTOMT-222ENST00000615940 ARAP1Q96P48 1450 aa13.74□□□□□ -0.21
LRTOMT-222ENST00000615940 KIAA0556O60303 1618 aa13.74□□□□□ -0.21
LRTOMT-222ENST00000615940 MYT1LQ9UL68 1186 aa13.74□□□□□ -0.21
LRTOMT-222ENST00000615940 GLIPR1L2Q4G1C9 344 aa13.72□□□□□ -0.21
LRTOMT-222ENST00000615940 P3H3Q8IVL6 736 aa13.71□□□□□ -0.21
LRTOMT-222ENST00000615940 SLC4A1APQ9BWU0 796 aaKnown RBP13.71□□□□□ -0.21
LRTOMT-222ENST00000615940 SAMD9Q5K651 1589 aa13.71□□□□□ -0.22
LRTOMT-222ENST00000615940 A0A0U1RQG5 324 aaPredicted RBP13.7□□□□□ -0.22
LRTOMT-222ENST00000615940 CYB5RLQ6IPT4 315 aa13.7□□□□□ -0.22
LRTOMT-222ENST00000615940 PAXIP1Q6ZW49 1069 aaPredicted RBP13.7□□□□□ -0.22
LRTOMT-222ENST00000615940 PPP6R1Q9UPN7 881 aa13.7□□□□□ -0.22
LRTOMT-222ENST00000615940 CARMIL2Q6F5E8 1435 aa13.68□□□□□ -0.22
LRTOMT-222ENST00000615940 TNIKQ9UKE5 1360 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms