RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 CNGB1Q14028 1251 aaPredicted RBP13.36□□□□□ -0.27
TNFRSF9-204ENST00000615230 HRCP23327 699 aa13.36□□□□□ -0.27
TNFRSF9-204ENST00000615230 MROH2BQ7Z745 1585 aa13.36□□□□□ -0.27
TNFRSF9-204ENST00000615230 TNIKQ9UKE5 1360 aa13.34□□□□□ -0.27
TNFRSF9-204ENST00000615230 CCNB3Q8WWL7 1395 aa13.34□□□□□ -0.27
TNFRSF9-204ENST00000615230 C14orf37Q86TY3 774 aa13.33□□□□□ -0.28
TNFRSF9-204ENST00000615230 CLSPNQ9HAW4 1339 aa13.32□□□□□ -0.28
TNFRSF9-204ENST00000615230 CANXP27824 592 aaKnown RBP13.32□□□□□ -0.28
TNFRSF9-204ENST00000615230 CDCA8Q53HL2 280 aa13.29□□□□□ -0.28
TNFRSF9-204ENST00000615230 FANCD2Q9BXW9 1451 aa13.29□□□□□ -0.28
TNFRSF9-204ENST00000615230 CHIC2Q9UKJ5 165 aa13.28□□□□□ -0.28
TNFRSF9-204ENST00000615230 FMN1Q68DA7 1419 aa13.27□□□□□ -0.29
TNFRSF9-204ENST00000615230 CEP162Q5TB80 1403 aa13.26□□□□□ -0.29
TNFRSF9-204ENST00000615230 HAP1P54257 671 aaPredicted RBP13.25□□□□□ -0.29
TNFRSF9-204ENST00000615230 OSCARQ8IYS5 282 aa13.23□□□□□ -0.29
TNFRSF9-204ENST00000615230 NCAPD3P42695 1498 aa13.23□□□□□ -0.29
TNFRSF9-204ENST00000615230 SCAF1Q9H7N4 1312 aaKnown RBP13.23□□□□□ -0.29
TNFRSF9-204ENST00000615230 NPM2Q86SE8 214 aaKnown RBP13.21□□□□□ -0.29
TNFRSF9-204ENST00000615230 WIZO95785 1651 aa13.21□□□□□ -0.3
TNFRSF9-204ENST00000615230 DIEXFQ68CQ4 756 aaKnown RBP13.21□□□□□ -0.3
TNFRSF9-204ENST00000615230 ZNF316A6NFI3 1004 aaPredicted RBP13.2□□□□□ -0.3
TNFRSF9-204ENST00000615230 RAPGEF2Q9Y4G8 1499 aa13.19□□□□□ -0.3
TNFRSF9-204ENST00000615230 EFCAB2Q5VUJ9 269 aa13.19□□□□□ -0.3
TNFRSF9-204ENST00000615230 RSPH4AQ5TD94 716 aa13.18□□□□□ -0.3
TNFRSF9-204ENST00000615230 TDRD9Q8NDG6 1382 aaKnown RBP13.14□□□□□ -0.31
TNFRSF9-204ENST00000615230 ARHGAP35Q9NRY4 1499 aa13.14□□□□□ -0.31
TNFRSF9-204ENST00000615230 MRC2Q9UBG0 1479 aa13.14□□□□□ -0.31
TNFRSF9-204ENST00000615230 HMGXB3Q12766 1538 aa13.13□□□□□ -0.31
TNFRSF9-204ENST00000615230 WDR43Q15061 677 aaKnown RBP eCLIP13.12□□□□□ -0.31
TNFRSF9-204ENST00000615230 CCDC18Q5T9S5 1454 aa13.12□□□□□ -0.31
TNFRSF9-204ENST00000615230 RRP7BPQ9NSQ0 103 aa13.12□□□□□ -0.31
TNFRSF9-204ENST00000615230 CFAP53Q96M91 514 aa13.11□□□□□ -0.31
TNFRSF9-204ENST00000615230 POGKQ9P215 609 aa13.09□□□□□ -0.31
TNFRSF9-204ENST00000615230 KDM2AQ9Y2K7 1162 aa13.09□□□□□ -0.31
TNFRSF9-204ENST00000615230 CC2D2AQ9P2K1 1620 aa13.09□□□□□ -0.31
TNFRSF9-204ENST00000615230 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.09□□□□□ -0.31
TNFRSF9-204ENST00000615230 IFT140Q96RY7 1462 aa13.08□□□□□ -0.32
TNFRSF9-204ENST00000615230 ANKRD30AQ9BXX3 1397 aa13.05□□□□□ -0.32
TNFRSF9-204ENST00000615230 PNNQ9H307 717 aaKnown RBP13.05□□□□□ -0.32
TNFRSF9-204ENST00000615230 GAPVD1Q14C86 1478 aa13.05□□□□□ -0.32
TNFRSF9-204ENST00000615230 EIF4G2P78344 907 aaKnown RBP eCLIP13.05□□□□□ -0.32
TNFRSF9-204ENST00000615230 JPH4Q96JJ6 628 aa13.05□□□□□ -0.32
TNFRSF9-204ENST00000615230 PTPRGP23470 1445 aa13.05□□□□□ -0.32
TNFRSF9-204ENST00000615230 EID1Q9Y6B2 187 aa13.04□□□□□ -0.32
TNFRSF9-204ENST00000615230 ZBTB7CA1YPR0 619 aa13.03□□□□□ -0.32
TNFRSF9-204ENST00000615230 AEBP2Q6ZN18 517 aaPredicted RBP13.03□□□□□ -0.32
TNFRSF9-204ENST00000615230 GRIN2BQ13224 1484 aa13.01□□□□□ -0.33
TNFRSF9-204ENST00000615230 MLECQ14165 292 aa13□□□□□ -0.33
TNFRSF9-204ENST00000615230 A0A0G2JS52 829 aa13□□□□□ -0.33
TNFRSF9-204ENST00000615230 TMC1Q8TDI8 760 aa12.99□□□□□ -0.33
TNFRSF9-204ENST00000615230 VPS8Q8N3P4 1428 aa12.99□□□□□ -0.33
TNFRSF9-204ENST00000615230 FGD5Q6ZNL6 1462 aa12.98□□□□□ -0.33
TNFRSF9-204ENST00000615230 NUDCQ9Y266 331 aa12.98□□□□□ -0.33
TNFRSF9-204ENST00000615230 MYH16Q9H6N6 1097 aa12.97□□□□□ -0.33
TNFRSF9-204ENST00000615230 SPAG9O60271 1321 aaKnown RBP12.97□□□□□ -0.33
TNFRSF9-204ENST00000615230 KNSTRNQ9Y448 316 aa12.96□□□□□ -0.33
TNFRSF9-204ENST00000615230 LAMC3Q9Y6N6 1575 aa12.96□□□□□ -0.33
TNFRSF9-204ENST00000615230 EIF3AQ14152 1382 aaKnown RBP12.96□□□□□ -0.33
TNFRSF9-204ENST00000615230 EIF5BO60841 1220 aaKnown RBP12.96□□□□□ -0.33
TNFRSF9-204ENST00000615230 UACAQ9BZF9 1416 aa12.95□□□□□ -0.34
TNFRSF9-204ENST00000615230 RGL3Q3MIN7 710 aa12.94□□□□□ -0.34
TNFRSF9-204ENST00000615230 TIMELESSQ9UNS1 1208 aa12.94□□□□□ -0.34
TNFRSF9-204ENST00000615230 GGT6Q6P531 493 aa12.94□□□□□ -0.34
TNFRSF9-204ENST00000615230 CARD11Q9BXL7 1154 aa12.94□□□□□ -0.34
TNFRSF9-204ENST00000615230 CFTRP13569 1480 aa12.91□□□□□ -0.34
TNFRSF9-204ENST00000615230 TMF1P82094 1093 aa12.91□□□□□ -0.34
TNFRSF9-204ENST00000615230 RTL5Q5HYW3 569 aaPredicted RBP12.91□□□□□ -0.34
TNFRSF9-204ENST00000615230 CYB5RLQ6IPT4 315 aa12.9□□□□□ -0.34
TNFRSF9-204ENST00000615230 CHMP4BQ9H444 224 aaKnown RBP12.9□□□□□ -0.35
TNFRSF9-204ENST00000615230 LMOD2Q6P5Q4 547 aa12.89□□□□□ -0.35
TNFRSF9-204ENST00000615230 HDGFL2Q7Z4V5 671 aaPredicted RBP12.89□□□□□ -0.35
TNFRSF9-204ENST00000615230 MAPK8IP3Q9UPT6 1336 aa12.89□□□□□ -0.35
TNFRSF9-204ENST00000615230 UPF2Q9HAU5 1272 aaKnown RBP12.89□□□□□ -0.35
TNFRSF9-204ENST00000615230 WASHC2CQ9Y4E1 1318 aa12.87□□□□□ -0.35
TNFRSF9-204ENST00000615230 MYT1Q01538 1121 aa12.87□□□□□ -0.35
TNFRSF9-204ENST00000615230 CHMP4AQ9BY43 222 aa12.87□□□□□ -0.35
TNFRSF9-204ENST00000615230 SETD5Q9C0A6 1442 aa12.86□□□□□ -0.35
TNFRSF9-204ENST00000615230 CUX1P39880 1505 aa12.86□□□□□ -0.35
TNFRSF9-204ENST00000615230 DNMBPQ6XZF7 1577 aa12.86□□□□□ -0.35
TNFRSF9-204ENST00000615230 FHOD3Q2V2M9 1422 aa12.84□□□□□ -0.35
TNFRSF9-204ENST00000615230 KIF3BO15066 747 aa12.83□□□□□ -0.36
TNFRSF9-204ENST00000615230 NPHP1O15259 732 aa12.83□□□□□ -0.36
TNFRSF9-204ENST00000615230 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.83□□□□□ -0.36
TNFRSF9-204ENST00000615230 SYNJ2O15056 1496 aa12.83□□□□□ -0.36
TNFRSF9-204ENST00000615230 FAM69CQ0P6D2 419 aa12.83□□□□□ -0.36
TNFRSF9-204ENST00000615230 SRPK2P78362 688 aaKnown RBP12.82□□□□□ -0.36
TNFRSF9-204ENST00000615230 MS4A1P11836 297 aa12.81□□□□□ -0.36
TNFRSF9-204ENST00000615230 PLEKHH2Q8IVE3 1493 aa12.81□□□□□ -0.36
TNFRSF9-204ENST00000615230 NUP155O75694 1391 aa12.8□□□□□ -0.36
TNFRSF9-204ENST00000615230 MRS2Q9HD23 443 aa12.8□□□□□ -0.36
TNFRSF9-204ENST00000615230 POGZQ7Z3K3 1410 aa12.8□□□□□ -0.36
TNFRSF9-204ENST00000615230 RAD54L2Q9Y4B4 1467 aa12.8□□□□□ -0.36
TNFRSF9-204ENST00000615230 EFCAB5A4FU69 1503 aa12.78□□□□□ -0.36
TNFRSF9-204ENST00000615230 FAM9BQ8IZU0 186 aa12.78□□□□□ -0.36
TNFRSF9-204ENST00000615230 PRDM2Q13029 1718 aa12.78□□□□□ -0.36
TNFRSF9-204ENST00000615230 TOPBP1Q92547 1522 aa12.78□□□□□ -0.36
TNFRSF9-204ENST00000615230 AQRO60306 1485 aaKnown RBP eCLIP12.78□□□□□ -0.36
TNFRSF9-204ENST00000615230 DDX10Q13206 875 aaKnown RBP12.78□□□□□ -0.36
TNFRSF9-204ENST00000615230 DCAF11Q8TEB1 546 aa12.78□□□□□ -0.36
TNFRSF9-204ENST00000615230 PKD2Q13563 968 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms