RNA–Protein interactions for RNA: ENST00000614398.4

CBWD3-210, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-210ENST00000614398 SHROOM2Q13796 1616 aa10.18□□□□□ -0.78
CBWD3-210ENST00000614398 IQGAP2Q13576 1575 aa10.18□□□□□ -0.78
CBWD3-210ENST00000614398 UGGT2Q9NYU1 1516 aa10.17□□□□□ -0.78
CBWD3-210ENST00000614398 EFCAB5A4FU69 1503 aa10.17□□□□□ -0.78
CBWD3-210ENST00000614398 SAMD9Q5K651 1589 aa10.16□□□□□ -0.78
CBWD3-210ENST00000614398 CHMP7Q8WUX9 453 aaPredicted RBP10.15□□□□□ -0.79
CBWD3-210ENST00000614398 CEP162Q5TB80 1403 aa10.1□□□□□ -0.79
CBWD3-210ENST00000614398 KIAA0556O60303 1618 aa10.09□□□□□ -0.79
CBWD3-210ENST00000614398 CLIP1P30622 1438 aa10.08□□□□□ -0.8
CBWD3-210ENST00000614398 LOC105371045A0A1W2PR82 267 aa10.08□□□□□ -0.8
CBWD3-210ENST00000614398 UBTFP17480 764 aaKnown RBP10.08□□□□□ -0.8
CBWD3-210ENST00000614398 DISP1Q96F81 1524 aa10.08□□□□□ -0.8
CBWD3-210ENST00000614398 ARHGAP35Q9NRY4 1499 aa10.08□□□□□ -0.8
CBWD3-210ENST00000614398 ARAP1Q96P48 1450 aa10.05□□□□□ -0.8
CBWD3-210ENST00000614398 OSCARQ8IYS5 282 aa10.04□□□□□ -0.8
CBWD3-210ENST00000614398 CARMIL2Q6F5E8 1435 aa10.04□□□□□ -0.8
CBWD3-210ENST00000614398 FBLN2P98095 1184 aa10.04□□□□□ -0.8
CBWD3-210ENST00000614398 JPH4Q96JJ6 628 aa10.01□□□□□ -0.81
CBWD3-210ENST00000614398 FMN1Q68DA7 1419 aa10□□□□□ -0.81
CBWD3-210ENST00000614398 PRG4Q92954 1404 aaPredicted RBP10□□□□□ -0.81
CBWD3-210ENST00000614398 VPS8Q8N3P4 1428 aa10□□□□□ -0.81
CBWD3-210ENST00000614398 FYCO1Q9BQS8 1478 aa9.98□□□□□ -0.81
CBWD3-210ENST00000614398 MAP3K1Q13233 1512 aa9.98□□□□□ -0.81
CBWD3-210ENST00000614398 ABCA8O94911 1581 aa9.98□□□□□ -0.81
CBWD3-210ENST00000614398 CASKIN1Q8WXD9 1431 aa9.97□□□□□ -0.81
CBWD3-210ENST00000614398 ERCC6L2Q5T890 1561 aa9.97□□□□□ -0.81
CBWD3-210ENST00000614398 FHOD3Q2V2M9 1422 aa9.97□□□□□ -0.81
CBWD3-210ENST00000614398 UHRF1BP1LA0JNW5 1464 aa9.96□□□□□ -0.81
CBWD3-210ENST00000614398 HECW1Q76N89 1606 aa9.96□□□□□ -0.81
CBWD3-210ENST00000614398 RAPGEF6Q8TEU7 1601 aa9.96□□□□□ -0.82
CBWD3-210ENST00000614398 PCF11O94913 1555 aaKnown RBP9.96□□□□□ -0.82
CBWD3-210ENST00000614398 CFAP43Q8NDM7 1665 aa9.95□□□□□ -0.82
CBWD3-210ENST00000614398 ARHGEF11O15085 1522 aa9.95□□□□□ -0.82
CBWD3-210ENST00000614398 SENP3Q9H4L4 574 aaPredicted RBP9.95□□□□□ -0.82
CBWD3-210ENST00000614398 RIMBP3CA6NJZ7 1639 aa9.93□□□□□ -0.82
CBWD3-210ENST00000614398 RIMBP3BA6NNM3 1639 aa9.93□□□□□ -0.82
CBWD3-210ENST00000614398 RIMBP3Q9UFD9 1639 aa9.93□□□□□ -0.82
CBWD3-210ENST00000614398 EHMT2Q96KQ7 1210 aa9.93□□□□□ -0.82
CBWD3-210ENST00000614398 CCDC18Q5T9S5 1454 aa9.93□□□□□ -0.82
CBWD3-210ENST00000614398 ABCC2Q92887 1545 aa9.92□□□□□ -0.82
CBWD3-210ENST00000614398 PTPRGP23470 1445 aa9.92□□□□□ -0.82
CBWD3-210ENST00000614398 LRRIQ1Q96JM4 1722 aa9.91□□□□□ -0.82
CBWD3-210ENST00000614398 UACAQ9BZF9 1416 aa9.9□□□□□ -0.82
CBWD3-210ENST00000614398 TIAM1Q13009 1591 aa9.9□□□□□ -0.83
CBWD3-210ENST00000614398 NUP153P49790 1475 aaKnown RBP9.9□□□□□ -0.83
CBWD3-210ENST00000614398 ADCY10Q96PN6 1610 aa9.88□□□□□ -0.83
CBWD3-210ENST00000614398 KDM5BQ9UGL1 1544 aa9.88□□□□□ -0.83
CBWD3-210ENST00000614398 EPRSP07814 1512 aaKnown RBP9.87□□□□□ -0.83
CBWD3-210ENST00000614398 PLB1Q6P1J6 1458 aa9.87□□□□□ -0.83
CBWD3-210ENST00000614398 PHF23Q9BUL5 403 aaPredicted RBP9.85□□□□□ -0.83
CBWD3-210ENST00000614398 ZCCHC11Q5TAX3 1644 aaKnown RBP9.84□□□□□ -0.83
CBWD3-210ENST00000614398 P3H3Q8IVL6 736 aa9.84□□□□□ -0.83
CBWD3-210ENST00000614398 EHBP1L1Q8N3D4 1523 aa9.84□□□□□ -0.83
CBWD3-210ENST00000614398 RANGAP1P46060 587 aaPredicted RBP9.83□□□□□ -0.84
CBWD3-210ENST00000614398 PELP1Q8IZL8 1130 aaKnown RBP9.83□□□□□ -0.84
CBWD3-210ENST00000614398 ATP10BO94823 1461 aa9.83□□□□□ -0.84
CBWD3-210ENST00000614398 LRRC9Q6ZRR7 1453 aa9.82□□□□□ -0.84
CBWD3-210ENST00000614398 MAPKBP1O60336 1514 aa9.81□□□□□ -0.84
CBWD3-210ENST00000614398 CDK13Q14004 1512 aaKnown RBP9.81□□□□□ -0.84
CBWD3-210ENST00000614398 MAGI3Q5TCQ9 1506 aa9.79□□□□□ -0.84
CBWD3-210ENST00000614398 SUPT6HQ7KZ85 1726 aaKnown RBP9.79□□□□□ -0.84
CBWD3-210ENST00000614398 TROQ12816 1431 aaPredicted RBP9.79□□□□□ -0.84
CBWD3-210ENST00000614398 DNAJC5Q9H3Z4 198 aa9.77□□□□□ -0.84
CBWD3-210ENST00000614398 KIF14Q15058 1648 aa9.77□□□□□ -0.85
CBWD3-210ENST00000614398 CDK11AQ9UQ88 783 aaPredicted RBP9.75□□□□□ -0.85
CBWD3-210ENST00000614398 WDR7Q9Y4E6 1490 aa9.75□□□□□ -0.85
CBWD3-210ENST00000614398 APLP2Q06481 763 aa9.75□□□□□ -0.85
CBWD3-210ENST00000614398 ARAP3Q8WWN8 1544 aa9.75□□□□□ -0.85
CBWD3-210ENST00000614398 GLI2P10070 1586 aa9.75□□□□□ -0.85
CBWD3-210ENST00000614398 ITSN2Q9NZM3 1697 aa9.74□□□□□ -0.85
CBWD3-210ENST00000614398 ABCC10Q5T3U5 1492 aa9.74□□□□□ -0.85
CBWD3-210ENST00000614398 ABCA9Q8IUA7 1624 aa9.74□□□□□ -0.85
CBWD3-210ENST00000614398 MTUS2Q5JR59 1369 aa9.73□□□□□ -0.85
CBWD3-210ENST00000614398 NCOA2Q15596 1464 aa9.72□□□□□ -0.85
CBWD3-210ENST00000614398 ASXL2Q76L83 1435 aa9.72□□□□□ -0.85
CBWD3-210ENST00000614398 PREX2Q70Z35 1606 aa9.71□□□□□ -0.85
CBWD3-210ENST00000614398 CDC42BPAQ5VT25 1732 aa9.71□□□□□ -0.86
CBWD3-210ENST00000614398 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.7□□□□□ -0.86
CBWD3-210ENST00000614398 PLEKHD1A6NEE1 506 aa9.7□□□□□ -0.86
CBWD3-210ENST00000614398 MYT1Q01538 1121 aa9.7□□□□□ -0.86
CBWD3-210ENST00000614398 KANK4Q5T7N3 995 aaPredicted RBP9.7□□□□□ -0.86
CBWD3-210ENST00000614398 MYO5CQ9NQX4 1742 aa9.7□□□□□ -0.86
CBWD3-210ENST00000614398 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.7□□□□□ -0.86
CBWD3-210ENST00000614398 MIA2Q96PC5 1412 aa9.69□□□□□ -0.86
CBWD3-210ENST00000614398 TTC37Q6PGP7 1564 aa9.69□□□□□ -0.86
CBWD3-210ENST00000614398 DIP2BQ9P265 1576 aa9.69□□□□□ -0.86
CBWD3-210ENST00000614398 MAP3K4Q9Y6R4 1608 aa9.69□□□□□ -0.86
CBWD3-210ENST00000614398 RRBP1Q9P2E9 1410 aaKnown RBP9.69□□□□□ -0.86
CBWD3-210ENST00000614398 TCOF1Q13428 1488 aaKnown RBP9.69□□□□□ -0.86
CBWD3-210ENST00000614398 NPM1P06748 294 aaKnown RBP eCLIP9.69□□□□□ -0.86
CBWD3-210ENST00000614398 MYOM3Q5VTT5 1437 aa9.68□□□□□ -0.86
CBWD3-210ENST00000614398 CYB5RLQ6IPT4 315 aa9.68□□□□□ -0.86
CBWD3-210ENST00000614398 TTBK1Q5TCY1 1321 aaPredicted RBP9.68□□□□□ -0.86
CBWD3-210ENST00000614398 CFAP74Q9C0B2 1584 aa9.67□□□□□ -0.86
CBWD3-210ENST00000614398 ATP1B4Q9UN42 357 aaPredicted RBP9.67□□□□□ -0.86
CBWD3-210ENST00000614398 CDC42BPBQ9Y5S2 1711 aa9.67□□□□□ -0.86
CBWD3-210ENST00000614398 GPATCH8Q9UKJ3 1502 aaKnown RBP9.67□□□□□ -0.86
CBWD3-210ENST00000614398 PHLDB1Q86UU1 1377 aa9.66□□□□□ -0.86
CBWD3-210ENST00000614398 KIF13AQ9H1H9 1805 aa9.65□□□□□ -0.86
CBWD3-210ENST00000614398 FGD6Q6ZV73 1430 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms