RNA–Protein interactions for RNA: ENST00000614132.4

PSMB3-209, Transcript of proteasome subunit beta 3, humanhuman

TSL 2

Gene PSMB3, Length 426 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-209ENST00000614132 TOP2BQ02880 1626 aa9.33□□□□□ -0.92
PSMB3-209ENST00000614132 TOP2AP11388 1531 aaKnown RBP9.32□□□□□ -0.92
PSMB3-209ENST00000614132 NUP160Q12769 1436 aa9.31□□□□□ -0.92
PSMB3-209ENST00000614132 SHROOM2Q13796 1616 aa9.31□□□□□ -0.92
PSMB3-209ENST00000614132 PRG4Q92954 1404 aaPredicted RBP9.31□□□□□ -0.92
PSMB3-209ENST00000614132 GRIN2AQ12879 1464 aa9.29□□□□□ -0.92
PSMB3-209ENST00000614132 FGD5Q6ZNL6 1462 aa9.28□□□□□ -0.92
PSMB3-209ENST00000614132 CCDC88BA6NC98 1476 aa9.27□□□□□ -0.93
PSMB3-209ENST00000614132 JPH4Q96JJ6 628 aa9.26□□□□□ -0.93
PSMB3-209ENST00000614132 ADCY10Q96PN6 1610 aa9.24□□□□□ -0.93
PSMB3-209ENST00000614132 PPRC1Q5VV67 1664 aaKnown RBP9.23□□□□□ -0.93
PSMB3-209ENST00000614132 PCF11O94913 1555 aaKnown RBP9.23□□□□□ -0.93
PSMB3-209ENST00000614132 PTPRMP28827 1452 aa9.22□□□□□ -0.93
PSMB3-209ENST00000614132 PBRM1Q86U86 1689 aa9.22□□□□□ -0.93
PSMB3-209ENST00000614132 HSPA2P54652 639 aa9.2□□□□□ -0.94
PSMB3-209ENST00000614132 GLI2P10070 1586 aa9.2□□□□□ -0.94
PSMB3-209ENST00000614132 PLB1Q6P1J6 1458 aa9.15□□□□□ -0.94
PSMB3-209ENST00000614132 TEX14Q8IWB6 1497 aa9.15□□□□□ -0.94
PSMB3-209ENST00000614132 ASXL2Q76L83 1435 aa9.15□□□□□ -0.94
PSMB3-209ENST00000614132 FHAD1B1AJZ9 1412 aa9.14□□□□□ -0.95
PSMB3-209ENST00000614132 ABCA5Q8WWZ7 1642 aa9.14□□□□□ -0.95
PSMB3-209ENST00000614132 ADAMTS12P58397 1594 aa9.14□□□□□ -0.95
PSMB3-209ENST00000614132 CUX1P39880 1505 aa9.13□□□□□ -0.95
PSMB3-209ENST00000614132 ABCA10Q8WWZ4 1543 aa9.13□□□□□ -0.95
PSMB3-209ENST00000614132 ADAMTSL3P82987 1691 aa9.1□□□□□ -0.95
PSMB3-209ENST00000614132 KIF21BO75037 1637 aa9.09□□□□□ -0.95
PSMB3-209ENST00000614132 EPRSP07814 1512 aaKnown RBP9.09□□□□□ -0.95
PSMB3-209ENST00000614132 ABCC2Q92887 1545 aa9.09□□□□□ -0.95
PSMB3-209ENST00000614132 MAP3K4Q9Y6R4 1608 aa9.08□□□□□ -0.96
PSMB3-209ENST00000614132 PTPRGP23470 1445 aa9.06□□□□□ -0.96
PSMB3-209ENST00000614132 DMRT2Q9Y5R5 561 aa9.05□□□□□ -0.96
PSMB3-209ENST00000614132 KIAA0586Q9BVV6 1533 aa9.05□□□□□ -0.96
PSMB3-209ENST00000614132 TTBK1Q5TCY1 1321 aaPredicted RBP9.04□□□□□ -0.96
PSMB3-209ENST00000614132 RUSC2Q8N2Y8 1516 aa9.02□□□□□ -0.97
PSMB3-209ENST00000614132 PLPPR3Q6T4P5 718 aa9.01□□□□□ -0.97
PSMB3-209ENST00000614132 YEATS2Q9ULM3 1422 aa9.01□□□□□ -0.97
PSMB3-209ENST00000614132 MADDQ8WXG6 1647 aa9.01□□□□□ -0.97
PSMB3-209ENST00000614132 ARID4BQ4LE39 1312 aaPredicted RBP9.01□□□□□ -0.97
PSMB3-209ENST00000614132 IQSEC2Q5JU85 1478 aa8.99□□□□□ -0.97
PSMB3-209ENST00000614132 MAGI3Q5TCQ9 1506 aa8.99□□□□□ -0.97
PSMB3-209ENST00000614132 MED1Q15648 1581 aaPredicted RBP8.99□□□□□ -0.97
PSMB3-209ENST00000614132 UHRF1BP1LA0JNW5 1464 aa8.98□□□□□ -0.97
PSMB3-209ENST00000614132 PHF23Q9BUL5 403 aaPredicted RBP8.98□□□□□ -0.97
PSMB3-209ENST00000614132 ERICH3Q5RHP9 1530 aa8.98□□□□□ -0.97
PSMB3-209ENST00000614132 CD109Q6YHK3 1445 aa8.97□□□□□ -0.97
PSMB3-209ENST00000614132 BCORL1Q5H9F3 1711 aa8.97□□□□□ -0.97
PSMB3-209ENST00000614132 TNIKQ9UKE5 1360 aa8.97□□□□□ -0.97
PSMB3-209ENST00000614132 UBAP1LF5GYI3 381 aa8.96□□□□□ -0.98
PSMB3-209ENST00000614132 CUL7Q14999 1698 aa8.96□□□□□ -0.98
PSMB3-209ENST00000614132 WRNQ14191 1432 aaPredicted RBP eCLIP8.96□□□□□ -0.98
PSMB3-209ENST00000614132 UACAQ9BZF9 1416 aa8.95□□□□□ -0.98
PSMB3-209ENST00000614132 KDM5BQ9UGL1 1544 aa8.95□□□□□ -0.98
PSMB3-209ENST00000614132 LTBP4Q8N2S1 1624 aa8.94□□□□□ -0.98
PSMB3-209ENST00000614132 ARAP3Q8WWN8 1544 aa8.94□□□□□ -0.98
PSMB3-209ENST00000614132 RIMS1Q86UR5 1692 aaKnown RBP8.94□□□□□ -0.98
PSMB3-209ENST00000614132 PTPRTO14522 1441 aa8.93□□□□□ -0.98
PSMB3-209ENST00000614132 HSPA1LP34931 641 aa8.92□□□□□ -0.98
PSMB3-209ENST00000614132 WDR7Q9Y4E6 1490 aa8.91□□□□□ -0.98
PSMB3-209ENST00000614132 RAPGEF3O95398 923 aa8.91□□□□□ -0.98
PSMB3-209ENST00000614132 KCNH8Q96L42 1107 aa8.9□□□□□ -0.98
PSMB3-209ENST00000614132 STRCQ7RTU9 1775 aa8.9□□□□□ -0.98
PSMB3-209ENST00000614132 CARMIL2Q6F5E8 1435 aa8.89□□□□□ -0.99
PSMB3-209ENST00000614132 ZCCHC11Q5TAX3 1644 aaKnown RBP8.87□□□□□ -0.99
PSMB3-209ENST00000614132 CFAP43Q8NDM7 1665 aa8.86□□□□□ -0.99
PSMB3-209ENST00000614132 PHLDB1Q86UU1 1377 aa8.86□□□□□ -0.99
PSMB3-209ENST00000614132 POGZQ7Z3K3 1410 aa8.84□□□□□ -0.99
PSMB3-209ENST00000614132 RGS17Q9UGC6 210 aaPredicted RBP8.84□□□□□ -0.99
PSMB3-209ENST00000614132 CEBPAP49715 358 aaPredicted RBP8.83□□□□□ -1
PSMB3-209ENST00000614132 SCAF1Q9H7N4 1312 aaKnown RBP8.82□□□□□ -1
PSMB3-209ENST00000614132 PIP4K2BP78356 416 aa8.82□□□□□ -1
PSMB3-209ENST00000614132 MLECQ14165 292 aa8.82□□□□□ -1
PSMB3-209ENST00000614132 UHRF1BP1Q6BDS2 1440 aa8.81□□□□□ -1
PSMB3-209ENST00000614132 PREX1Q8TCU6 1659 aa8.81□□□□□ -1
PSMB3-209ENST00000614132 ZNF335Q9H4Z2 1342 aaPredicted RBP8.8□□□□□ -1
PSMB3-209ENST00000614132 TTC37Q6PGP7 1564 aa8.79□□□□□ -1
PSMB3-209ENST00000614132 FANCAO15360 1455 aa8.78□□□□□ -1
PSMB3-209ENST00000614132 DISP1Q96F81 1524 aa8.77□□□□□ -1.01
PSMB3-209ENST00000614132 TOM1O60784 492 aa8.77□□□□□ -1.01
PSMB3-209ENST00000614132 FRMPD1Q5SYB0 1578 aa8.77□□□□□ -1.01
PSMB3-209ENST00000614132 ARHGEF40Q8TER5 1519 aa8.76□□□□□ -1.01
PSMB3-209ENST00000614132 NCOA1Q15788 1441 aa8.75□□□□□ -1.01
PSMB3-209ENST00000614132 AKNAQ7Z591 1439 aa8.75□□□□□ -1.01
PSMB3-209ENST00000614132 POTEAQ6S8J7 498 aa8.75□□□□□ -1.01
PSMB3-209ENST00000614132 NEO1Q92859 1461 aa8.75□□□□□ -1.01
PSMB3-209ENST00000614132 IGF1RP08069 1367 aa8.74□□□□□ -1.01
PSMB3-209ENST00000614132 SRCAPQ6ZRS2 3230 aa8.74□□□□□ -1.01
PSMB3-209ENST00000614132 FER1L4A9Z1Z3 1794 aa8.72□□□□□ -1.01
PSMB3-209ENST00000614132 ARHGEF12Q9NZN5 1544 aa8.71□□□□□ -1.01
PSMB3-209ENST00000614132 UPF1Q92900 1129 aaKnown RBP eCLIP8.71□□□□□ -1.02
PSMB3-209ENST00000614132 BIVM-ERCC5R4GMW8 1640 aa8.71□□□□□ -1.02
PSMB3-209ENST00000614132 SIGLEC1Q9BZZ2 1709 aa8.71□□□□□ -1.02
PSMB3-209ENST00000614132 SETD1BQ9UPS6 1966 aaKnown RBP8.7□□□□□ -1.02
PSMB3-209ENST00000614132 NCKAP5LQ9HCH0 1330 aa8.7□□□□□ -1.02
PSMB3-209ENST00000614132 FHOD3Q2V2M9 1422 aa8.7□□□□□ -1.02
PSMB3-209ENST00000614132 DENND4BO75064 1496 aaPredicted RBP8.7□□□□□ -1.02
PSMB3-209ENST00000614132 IQGAP2Q13576 1575 aa8.69□□□□□ -1.02
PSMB3-209ENST00000614132 SENP3Q9H4L4 574 aaPredicted RBP8.68□□□□□ -1.02
PSMB3-209ENST00000614132 ABCA9Q8IUA7 1624 aa8.66□□□□□ -1.02
PSMB3-209ENST00000614132 ZFYVE16Q7Z3T8 1539 aa8.65□□□□□ -1.02
PSMB3-209ENST00000614132 TRAPPC8Q9Y2L5 1435 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms