RNA–Protein interactions for RNA: ENST00000612548.4

CIT-219, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 1 (best) BASIC

Gene CIT, Length 1,799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-219ENST00000612548 CHMP7Q8WUX9 453 aaPredicted RBP23.44■■□□□ 1.34
CIT-219ENST00000612548 FBLN2P98095 1184 aa23.42■■□□□ 1.34
CIT-219ENST00000612548 ARHGAP35Q9NRY4 1499 aa23.39■■□□□ 1.33
CIT-219ENST00000612548 ARAP1Q96P48 1450 aa23.36■■□□□ 1.33
CIT-219ENST00000612548 IQGAP2Q13576 1575 aa23.35■■□□□ 1.33
CIT-219ENST00000612548 CEP170Q5SW79 1584 aa23.35■■□□□ 1.33
CIT-219ENST00000612548 CHD1O14646 1710 aa23.34■■□□□ 1.33
CIT-219ENST00000612548 VPS8Q8N3P4 1428 aa23.31■■□□□ 1.32
CIT-219ENST00000612548 EFCAB5A4FU69 1503 aa23.31■■□□□ 1.32
CIT-219ENST00000612548 KIAA0586Q9BVV6 1533 aa23.3■■□□□ 1.32
CIT-219ENST00000612548 NUP160Q12769 1436 aa23.3■■□□□ 1.32
CIT-219ENST00000612548 SAMD9Q5K651 1589 aa23.27■■□□□ 1.31
CIT-219ENST00000612548 P3H3Q8IVL6 736 aa23.25■■□□□ 1.31
CIT-219ENST00000612548 FHOD3Q2V2M9 1422 aa23.24■■□□□ 1.31
CIT-219ENST00000612548 UGGT2Q9NYU1 1516 aa23.22■■□□□ 1.31
CIT-219ENST00000612548 KIAA0556O60303 1618 aa23.13■■□□□ 1.29
CIT-219ENST00000612548 PPARGC1BQ86YN6 1023 aaKnown RBP23.12■■□□□ 1.29
CIT-219ENST00000612548 DISP1Q96F81 1524 aa23.12■■□□□ 1.29
CIT-219ENST00000612548 PCF11O94913 1555 aaKnown RBP23.1■■□□□ 1.29
CIT-219ENST00000612548 JPH4Q96JJ6 628 aa23.09■■□□□ 1.29
CIT-219ENST00000612548 FMN1Q68DA7 1419 aa23.09■■□□□ 1.29
CIT-219ENST00000612548 APLP2Q06481 763 aa23.06■■□□□ 1.28
CIT-219ENST00000612548 CLASP1Q7Z460 1538 aa23.05■■□□□ 1.28
CIT-219ENST00000612548 FYCO1Q9BQS8 1478 aa23.02■■□□□ 1.28
CIT-219ENST00000612548 SHROOM2Q13796 1616 aa23.02■■□□□ 1.28
CIT-219ENST00000612548 CARMIL2Q6F5E8 1435 aa23.02■■□□□ 1.28
CIT-219ENST00000612548 CASKIN1Q8WXD9 1431 aa23.02■■□□□ 1.27
CIT-219ENST00000612548 TTBK1Q5TCY1 1321 aaPredicted RBP23.01■■□□□ 1.27
CIT-219ENST00000612548 PRG4Q92954 1404 aaPredicted RBP22.99■■□□□ 1.27
CIT-219ENST00000612548 ATP1B4Q9UN42 357 aaPredicted RBP22.98■■□□□ 1.27
CIT-219ENST00000612548 TIAM1Q13009 1591 aa22.94■■□□□ 1.26
CIT-219ENST00000612548 CFAP43Q8NDM7 1665 aa22.93■■□□□ 1.26
CIT-219ENST00000612548 LRRIQ1Q96JM4 1722 aa22.91■■□□□ 1.26
CIT-219ENST00000612548 MAP3K1Q13233 1512 aa22.91■■□□□ 1.26
CIT-219ENST00000612548 HECW1Q76N89 1606 aa22.9■■□□□ 1.26
CIT-219ENST00000612548 ERCC6L2Q5T890 1561 aa22.9■■□□□ 1.26
CIT-219ENST00000612548 TRIM26Q12899 539 aaPredicted RBP22.89■■□□□ 1.26
CIT-219ENST00000612548 KANK4Q5T7N3 995 aaPredicted RBP22.89■■□□□ 1.25
CIT-219ENST00000612548 OSCARQ8IYS5 282 aa22.88■■□□□ 1.25
CIT-219ENST00000612548 RAPGEF6Q8TEU7 1601 aa22.88■■□□□ 1.25
CIT-219ENST00000612548 PCGF6Q9BYE7 350 aa22.86■■□□□ 1.25
CIT-219ENST00000612548 PLB1Q6P1J6 1458 aa22.84■■□□□ 1.25
CIT-219ENST00000612548 CCDC18Q5T9S5 1454 aa22.82■■□□□ 1.24
CIT-219ENST00000612548 LRRC9Q6ZRR7 1453 aa22.82■■□□□ 1.24
CIT-219ENST00000612548 PTPRGP23470 1445 aa22.82■■□□□ 1.24
CIT-219ENST00000612548 EPRSP07814 1512 aaKnown RBP22.8■■□□□ 1.24
CIT-219ENST00000612548 NUP153P49790 1475 aaKnown RBP22.79■■□□□ 1.24
CIT-219ENST00000612548 ABCA8O94911 1581 aa22.79■■□□□ 1.24
CIT-219ENST00000612548 CDK13Q14004 1512 aaKnown RBP22.79■■□□□ 1.24
CIT-219ENST00000612548 ARID3CA6NKF2 412 aa22.78■■□□□ 1.24
CIT-219ENST00000612548 MTUS2Q5JR59 1369 aa22.71■■□□□ 1.23
CIT-219ENST00000612548 MAGI3Q5TCQ9 1506 aa22.7■■□□□ 1.22
CIT-219ENST00000612548 EHBP1L1Q8N3D4 1523 aa22.69■■□□□ 1.22
CIT-219ENST00000612548 UACAQ9BZF9 1416 aa22.69■■□□□ 1.22
CIT-219ENST00000612548 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.66■■□□□ 1.22
CIT-219ENST00000612548 HNRNPUL2Q1KMD3 747 aaKnown RBP22.66■■□□□ 1.22
CIT-219ENST00000612548 ABCC2Q92887 1545 aa22.65■■□□□ 1.22
CIT-219ENST00000612548 SUPT6HQ7KZ85 1726 aaKnown RBP22.63■■□□□ 1.21
CIT-219ENST00000612548 ATP10BO94823 1461 aa22.62■■□□□ 1.21
CIT-219ENST00000612548 PHLDB1Q86UU1 1377 aa22.61■■□□□ 1.21
CIT-219ENST00000612548 NCOA2Q15596 1464 aa22.58■■□□□ 1.21
CIT-219ENST00000612548 CDK11AQ9UQ88 783 aaPredicted RBP22.58■■□□□ 1.2
CIT-219ENST00000612548 RRBP1Q9P2E9 1410 aaKnown RBP22.57■■□□□ 1.2
CIT-219ENST00000612548 UHRF1BP1LA0JNW5 1464 aa22.56■■□□□ 1.2
CIT-219ENST00000612548 ARHGEF11O15085 1522 aa22.55■■□□□ 1.2
CIT-219ENST00000612548 TROQ12816 1431 aaPredicted RBP22.55■■□□□ 1.2
CIT-219ENST00000612548 ADCY10Q96PN6 1610 aa22.53■■□□□ 1.2
CIT-219ENST00000612548 CCNB3Q8WWL7 1395 aa22.51■■□□□ 1.19
CIT-219ENST00000612548 ZCCHC11Q5TAX3 1644 aaKnown RBP22.51■■□□□ 1.19
CIT-219ENST00000612548 KDM5BQ9UGL1 1544 aa22.49■■□□□ 1.19
CIT-219ENST00000612548 PLEKHD1A6NEE1 506 aa22.49■■□□□ 1.19
CIT-219ENST00000612548 KIF14Q15058 1648 aa22.49■■□□□ 1.19
CIT-219ENST00000612548 RIMBP3CA6NJZ7 1639 aa22.47■■□□□ 1.19
CIT-219ENST00000612548 RIMBP3BA6NNM3 1639 aa22.47■■□□□ 1.19
CIT-219ENST00000612548 RIMBP3Q9UFD9 1639 aa22.47■■□□□ 1.19
CIT-219ENST00000612548 MYOM3Q5VTT5 1437 aa22.47■■□□□ 1.19
CIT-219ENST00000612548 FGD6Q6ZV73 1430 aa22.46■■□□□ 1.19
CIT-219ENST00000612548 FAM50AQ14320 339 aaKnown RBP22.4■■□□□ 1.18
CIT-219ENST00000612548 PTPN23Q9H3S7 1636 aa22.39■■□□□ 1.17
CIT-219ENST00000612548 ABCC10Q5T3U5 1492 aa22.37■■□□□ 1.17
CIT-219ENST00000612548 ITSN2Q9NZM3 1697 aa22.36■■□□□ 1.17
CIT-219ENST00000612548 MIA2Q96PC5 1412 aa22.35■■□□□ 1.17
CIT-219ENST00000612548 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.34■■□□□ 1.17
CIT-219ENST00000612548 ITGAEP38570 1179 aa22.34■■□□□ 1.17
CIT-219ENST00000612548 GPATCH8Q9UKJ3 1502 aaKnown RBP22.33■■□□□ 1.17
CIT-219ENST00000612548 CDC42BPAQ5VT25 1732 aa22.33■■□□□ 1.17
CIT-219ENST00000612548 CYB5RLQ6IPT4 315 aa22.33■■□□□ 1.16
CIT-219ENST00000612548 TCOF1Q13428 1488 aaKnown RBP22.32■■□□□ 1.16
CIT-219ENST00000612548 TTC37Q6PGP7 1564 aa22.31■■□□□ 1.16
CIT-219ENST00000612548 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.3■■□□□ 1.16
CIT-219ENST00000612548 WDR7Q9Y4E6 1490 aa22.3■■□□□ 1.16
CIT-219ENST00000612548 NPM1P06748 294 aaKnown RBP eCLIP22.3■■□□□ 1.16
CIT-219ENST00000612548 KCNH8Q96L42 1107 aa22.3■■□□□ 1.16
CIT-219ENST00000612548 ASXL2Q76L83 1435 aa22.27■■□□□ 1.16
CIT-219ENST00000612548 CFDP1Q9UEE9 299 aaPredicted RBP22.27■■□□□ 1.16
CIT-219ENST00000612548 PREX2Q70Z35 1606 aa22.25■■□□□ 1.15
CIT-219ENST00000612548 MYO5CQ9NQX4 1742 aa22.24■■□□□ 1.15
CIT-219ENST00000612548 CDC42BPBQ9Y5S2 1711 aa22.23■■□□□ 1.15
CIT-219ENST00000612548 CAMSAP2Q08AD1 1489 aa22.23■■□□□ 1.15
CIT-219ENST00000612548 ZNF644Q9H582 1327 aaPredicted RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms