RNA–Protein interactions for RNA: ENST00000612438.1

LINC00547-201, long intergenic non-protein coding RNA 547, humanhuman

TSL 2 BASIC

Gene LINC00547, Length 3,314 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00547-201ENST00000612438 PODXL2Q9NZ53 605 aa12.44□□□□□ -0.42
LINC00547-201ENST00000612438 MSH5O43196 834 aa12.41□□□□□ -0.42
LINC00547-201ENST00000612438 CCNB3Q8WWL7 1395 aa12.4□□□□□ -0.42
LINC00547-201ENST00000612438 KIF27Q86VH2 1401 aa12.37□□□□□ -0.43
LINC00547-201ENST00000612438 DNAJC5BQ9UF47 199 aa12.36□□□□□ -0.43
LINC00547-201ENST00000612438 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.35□□□□□ -0.43
LINC00547-201ENST00000612438 CUX1P39880 1505 aa12.35□□□□□ -0.43
LINC00547-201ENST00000612438 ARHGAP35Q9NRY4 1499 aa12.35□□□□□ -0.43
LINC00547-201ENST00000612438 FANCIQ9NVI1 1328 aa12.33□□□□□ -0.44
LINC00547-201ENST00000612438 RAB3GAP2Q9H2M9 1393 aa12.32□□□□□ -0.44
LINC00547-201ENST00000612438 ITGAEP38570 1179 aa12.32□□□□□ -0.44
LINC00547-201ENST00000612438 KCNH8Q96L42 1107 aa12.31□□□□□ -0.44
LINC00547-201ENST00000612438 MAPKBP1O60336 1514 aa12.3□□□□□ -0.44
LINC00547-201ENST00000612438 NCAPD3P42695 1498 aa12.28□□□□□ -0.44
LINC00547-201ENST00000612438 MAP3K1Q13233 1512 aa12.28□□□□□ -0.44
LINC00547-201ENST00000612438 SETD5Q9C0A6 1442 aa12.27□□□□□ -0.45
LINC00547-201ENST00000612438 BCANQ96GW7 911 aa12.27□□□□□ -0.45
LINC00547-201ENST00000612438 HMGXB3Q12766 1538 aa12.27□□□□□ -0.45
LINC00547-201ENST00000612438 CFTRP13569 1480 aa12.25□□□□□ -0.45
LINC00547-201ENST00000612438 TIAM1Q13009 1591 aa12.24□□□□□ -0.45
LINC00547-201ENST00000612438 IGF1RP08069 1367 aa12.24□□□□□ -0.45
LINC00547-201ENST00000612438 DDX10Q13206 875 aaKnown RBP12.23□□□□□ -0.45
LINC00547-201ENST00000612438 WDR97A6NE52 1622 aa12.22□□□□□ -0.45
LINC00547-201ENST00000612438 LRRC9Q6ZRR7 1453 aa12.22□□□□□ -0.45
LINC00547-201ENST00000612438 TIMELESSQ9UNS1 1208 aa12.22□□□□□ -0.45
LINC00547-201ENST00000612438 PPP1R15AO75807 674 aaPredicted RBP12.21□□□□□ -0.45
LINC00547-201ENST00000612438 SIN3AQ96ST3 1273 aa12.21□□□□□ -0.45
LINC00547-201ENST00000612438 PHLDB1Q86UU1 1377 aa12.2□□□□□ -0.46
LINC00547-201ENST00000612438 FKBP8Q14318 412 aa12.2□□□□□ -0.46
LINC00547-201ENST00000612438 IL27Q8NEV9 243 aa12.19□□□□□ -0.46
LINC00547-201ENST00000612438 RTN4Q9NQC3 1192 aaKnown RBP12.19□□□□□ -0.46
LINC00547-201ENST00000612438 GLIPR1L2Q4G1C9 344 aa12.18□□□□□ -0.46
LINC00547-201ENST00000612438 CARMIL1Q5VZK9 1371 aa12.18□□□□□ -0.46
LINC00547-201ENST00000612438 FAM50AQ14320 339 aaKnown RBP12.17□□□□□ -0.46
LINC00547-201ENST00000612438 CCER2I3L3R5 266 aa12.17□□□□□ -0.46
LINC00547-201ENST00000612438 NEFLP07196 543 aa12.17□□□□□ -0.46
LINC00547-201ENST00000612438 CC2D2AQ9P2K1 1620 aa12.16□□□□□ -0.46
LINC00547-201ENST00000612438 FHAD1B1AJZ9 1412 aa12.15□□□□□ -0.46
LINC00547-201ENST00000612438 ANP32CO43423 234 aa12.12□□□□□ -0.47
LINC00547-201ENST00000612438 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.11□□□□□ -0.47
LINC00547-201ENST00000612438 CFAP43Q8NDM7 1665 aa12.11□□□□□ -0.47
LINC00547-201ENST00000612438 NESP48681 1621 aa12.11□□□□□ -0.47
LINC00547-201ENST00000612438 HIRIP3Q9BW71 556 aaPredicted RBP12.11□□□□□ -0.47
LINC00547-201ENST00000612438 NBR1Q14596 966 aa12.1□□□□□ -0.47
LINC00547-201ENST00000612438 PRDM2Q13029 1718 aa12.09□□□□□ -0.47
LINC00547-201ENST00000612438 PCF11O94913 1555 aaKnown RBP12.09□□□□□ -0.47
LINC00547-201ENST00000612438 RTL5Q5HYW3 569 aaPredicted RBP12.09□□□□□ -0.47
LINC00547-201ENST00000612438 TRIM52Q96A61 297 aa12.09□□□□□ -0.47
LINC00547-201ENST00000612438 FGD5Q6ZNL6 1462 aa12.09□□□□□ -0.47
LINC00547-201ENST00000612438 P3H3Q8IVL6 736 aa12.08□□□□□ -0.48
LINC00547-201ENST00000612438 CDK11AQ9UQ88 783 aaPredicted RBP12.08□□□□□ -0.48
LINC00547-201ENST00000612438 CADPSQ9ULU8 1353 aa12.07□□□□□ -0.48
LINC00547-201ENST00000612438 ATP1B4Q9UN42 357 aaPredicted RBP12.07□□□□□ -0.48
LINC00547-201ENST00000612438 ZMYND15Q9H091 742 aa12.06□□□□□ -0.48
LINC00547-201ENST00000612438 FYCO1Q9BQS8 1478 aa12.05□□□□□ -0.48
LINC00547-201ENST00000612438 CASKIN1Q8WXD9 1431 aa12.05□□□□□ -0.48
LINC00547-201ENST00000612438 TONSLQ96HA7 1378 aa12.04□□□□□ -0.48
LINC00547-201ENST00000612438 FHOD3Q2V2M9 1422 aa12.04□□□□□ -0.48
LINC00547-201ENST00000612438 AQRO60306 1485 aaKnown RBP eCLIP12.04□□□□□ -0.48
LINC00547-201ENST00000612438 NOP58Q9Y2X3 529 aaKnown RBP12.03□□□□□ -0.48
LINC00547-201ENST00000612438 FGD6Q6ZV73 1430 aa12.02□□□□□ -0.49
LINC00547-201ENST00000612438 EFCAB5A4FU69 1503 aa12.01□□□□□ -0.49
LINC00547-201ENST00000612438 VSIG10Q8N0Z9 540 aa12□□□□□ -0.49
LINC00547-201ENST00000612438 RSPH6AQ9H0K4 717 aa12□□□□□ -0.49
LINC00547-201ENST00000612438 UACAQ9BZF9 1416 aa12□□□□□ -0.49
LINC00547-201ENST00000612438 CCDC18Q5T9S5 1454 aa12□□□□□ -0.49
LINC00547-201ENST00000612438 HFM1A2PYH4 1435 aa11.99□□□□□ -0.49
LINC00547-201ENST00000612438 PTPRKQ15262 1439 aa11.98□□□□□ -0.49
LINC00547-201ENST00000612438 FMN1Q68DA7 1419 aa11.97□□□□□ -0.49
LINC00547-201ENST00000612438 PDE4CQ08493 712 aa11.96□□□□□ -0.49
LINC00547-201ENST00000612438 ABCA10Q8WWZ4 1543 aa11.96□□□□□ -0.5
LINC00547-201ENST00000612438 PTPN23Q9H3S7 1636 aa11.95□□□□□ -0.5
LINC00547-201ENST00000612438 FANCD2Q9BXW9 1451 aa11.95□□□□□ -0.5
LINC00547-201ENST00000612438 NAIPQ13075 1403 aa11.95□□□□□ -0.5
LINC00547-201ENST00000612438 C11orf95C9JLR9 678 aaPredicted RBP11.95□□□□□ -0.5
LINC00547-201ENST00000612438 HNRNPUQ00839 825 aaKnown RBP eCLIP11.94□□□□□ -0.5
LINC00547-201ENST00000612438 MTUS2Q5JR59 1369 aa11.94□□□□□ -0.5
LINC00547-201ENST00000612438 SNAPC4Q5SXM2 1469 aa11.94□□□□□ -0.5
LINC00547-201ENST00000612438 RAD54L2Q9Y4B4 1467 aa11.94□□□□□ -0.5
LINC00547-201ENST00000612438 KDM5BQ9UGL1 1544 aa11.94□□□□□ -0.5
LINC00547-201ENST00000612438 FGD1P98174 961 aa11.91□□□□□ -0.5
LINC00547-201ENST00000612438 CUL7Q14999 1698 aa11.91□□□□□ -0.5
LINC00547-201ENST00000612438 DNMBPQ6XZF7 1577 aa11.91□□□□□ -0.5
LINC00547-201ENST00000612438 MYOM3Q5VTT5 1437 aa11.91□□□□□ -0.5
LINC00547-201ENST00000612438 TDRD9Q8NDG6 1382 aaKnown RBP11.9□□□□□ -0.5
LINC00547-201ENST00000612438 WASHC2AQ641Q2 1341 aa11.9□□□□□ -0.5
LINC00547-201ENST00000612438 CTTNBP2Q8WZ74 1663 aa11.9□□□□□ -0.5
LINC00547-201ENST00000612438 POLA1P09884 1462 aaPredicted RBP11.9□□□□□ -0.5
LINC00547-201ENST00000612438 NCOA2Q15596 1464 aa11.9□□□□□ -0.5
LINC00547-201ENST00000612438 A0A0U1RQG5 324 aaPredicted RBP11.9□□□□□ -0.5
LINC00547-201ENST00000612438 HSPA5P11021 654 aaKnown RBP11.9□□□□□ -0.5
LINC00547-201ENST00000612438 PDIA4P13667 645 aaKnown RBP11.89□□□□□ -0.51
LINC00547-201ENST00000612438 TOPBP1Q92547 1522 aa11.89□□□□□ -0.51
LINC00547-201ENST00000612438 IRX6P78412 446 aaPredicted RBP11.88□□□□□ -0.51
LINC00547-201ENST00000612438 PAK3O75914 559 aaPredicted RBP11.88□□□□□ -0.51
LINC00547-201ENST00000612438 GRIN2BQ13224 1484 aa11.87□□□□□ -0.51
LINC00547-201ENST00000612438 ARID3CA6NKF2 412 aa11.86□□□□□ -0.51
LINC00547-201ENST00000612438 EIF4G2P78344 907 aaKnown RBP eCLIP11.86□□□□□ -0.51
LINC00547-201ENST00000612438 SAMD9Q5K651 1589 aa11.85□□□□□ -0.51
LINC00547-201ENST00000612438 PPP4R2Q9NY27 417 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms