RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 CTTNBP2Q8WZ74 1663 aa28.07■■■□□ 2.08
SREK1-216ENST00000612404 CHD1O14646 1710 aa28.02■■■□□ 2.08
SREK1-216ENST00000612404 CLIP1P30622 1438 aa28.01■■■□□ 2.07
SREK1-216ENST00000612404 CEP170Q5SW79 1584 aa27.97■■■□□ 2.07
SREK1-216ENST00000612404 NUP160Q12769 1436 aa27.93■■■□□ 2.06
SREK1-216ENST00000612404 IQGAP2Q13576 1575 aa27.92■■■□□ 2.06
SREK1-216ENST00000612404 KIAA0586Q9BVV6 1533 aa27.92■■■□□ 2.06
SREK1-216ENST00000612404 ARHGAP35Q9NRY4 1499 aa27.84■■■□□ 2.05
SREK1-216ENST00000612404 P3H3Q8IVL6 736 aa27.8■■■□□ 2.04
SREK1-216ENST00000612404 EFCAB5A4FU69 1503 aa27.79■■■□□ 2.04
SREK1-216ENST00000612404 ARAP1Q96P48 1450 aa27.77■■■□□ 2.04
SREK1-216ENST00000612404 UGGT2Q9NYU1 1516 aa27.76■■■□□ 2.03
SREK1-216ENST00000612404 SAMD9Q5K651 1589 aa27.74■■■□□ 2.03
SREK1-216ENST00000612404 JPH4Q96JJ6 628 aa27.74■■■□□ 2.03
SREK1-216ENST00000612404 FHOD3Q2V2M9 1422 aa27.71■■■□□ 2.03
SREK1-216ENST00000612404 VPS8Q8N3P4 1428 aa27.68■■■□□ 2.02
SREK1-216ENST00000612404 OSCARQ8IYS5 282 aa27.67■■■□□ 2.02
SREK1-216ENST00000612404 CLASP1Q7Z460 1538 aa27.67■■■□□ 2.02
SREK1-216ENST00000612404 DISP1Q96F81 1524 aa27.66■■■□□ 2.02
SREK1-216ENST00000612404 KIAA0556O60303 1618 aa27.63■■■□□ 2.01
SREK1-216ENST00000612404 CARMIL2Q6F5E8 1435 aa27.62■■■□□ 2.01
SREK1-216ENST00000612404 PRG4Q92954 1404 aaPredicted RBP27.6■■■□□ 2.01
SREK1-216ENST00000612404 SHROOM2Q13796 1616 aa27.6■■■□□ 2.01
SREK1-216ENST00000612404 TTBK1Q5TCY1 1321 aaPredicted RBP27.56■■■□□ 2
SREK1-216ENST00000612404 FMN1Q68DA7 1419 aa27.56■■■□□ 2
SREK1-216ENST00000612404 ATP1B4Q9UN42 357 aaPredicted RBP27.48■■□□□ 1.99
SREK1-216ENST00000612404 PCF11O94913 1555 aaKnown RBP27.47■■□□□ 1.99
SREK1-216ENST00000612404 ERCC6L2Q5T890 1561 aa27.47■■□□□ 1.99
SREK1-216ENST00000612404 APLP2Q06481 763 aa27.46■■□□□ 1.99
SREK1-216ENST00000612404 CASKIN1Q8WXD9 1431 aa27.43■■□□□ 1.98
SREK1-216ENST00000612404 FYCO1Q9BQS8 1478 aa27.42■■□□□ 1.98
SREK1-216ENST00000612404 PPARGC1BQ86YN6 1023 aaKnown RBP27.41■■□□□ 1.98
SREK1-216ENST00000612404 PTPRGP23470 1445 aa27.39■■□□□ 1.98
SREK1-216ENST00000612404 PLB1Q6P1J6 1458 aa27.33■■□□□ 1.97
SREK1-216ENST00000612404 RAPGEF6Q8TEU7 1601 aa27.32■■□□□ 1.96
SREK1-216ENST00000612404 HECW1Q76N89 1606 aa27.31■■□□□ 1.96
SREK1-216ENST00000612404 ARID3CA6NKF2 412 aa27.27■■□□□ 1.96
SREK1-216ENST00000612404 TIAM1Q13009 1591 aa27.26■■□□□ 1.95
SREK1-216ENST00000612404 LRRIQ1Q96JM4 1722 aa27.26■■□□□ 1.95
SREK1-216ENST00000612404 ABCA8O94911 1581 aa27.25■■□□□ 1.95
SREK1-216ENST00000612404 MAP3K1Q13233 1512 aa27.24■■□□□ 1.95
SREK1-216ENST00000612404 NUP153P49790 1475 aaKnown RBP27.23■■□□□ 1.95
SREK1-216ENST00000612404 CFAP43Q8NDM7 1665 aa27.23■■□□□ 1.95
SREK1-216ENST00000612404 KANK4Q5T7N3 995 aaPredicted RBP27.22■■□□□ 1.95
SREK1-216ENST00000612404 EPRSP07814 1512 aaKnown RBP27.22■■□□□ 1.95
SREK1-216ENST00000612404 CCDC18Q5T9S5 1454 aa27.22■■□□□ 1.95
SREK1-216ENST00000612404 UACAQ9BZF9 1416 aa27.21■■□□□ 1.95
SREK1-216ENST00000612404 ARHGEF11O15085 1522 aa27.19■■□□□ 1.94
SREK1-216ENST00000612404 CDK13Q14004 1512 aaKnown RBP27.18■■□□□ 1.94
SREK1-216ENST00000612404 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.17■■□□□ 1.94
SREK1-216ENST00000612404 HNRNPUL2Q1KMD3 747 aaKnown RBP27.17■■□□□ 1.94
SREK1-216ENST00000612404 LRRC9Q6ZRR7 1453 aa27.15■■□□□ 1.94
SREK1-216ENST00000612404 ABCC2Q92887 1545 aa27.13■■□□□ 1.93
SREK1-216ENST00000612404 MTUS2Q5JR59 1369 aa27.11■■□□□ 1.93
SREK1-216ENST00000612404 RIMBP3CA6NJZ7 1639 aa27.09■■□□□ 1.93
SREK1-216ENST00000612404 RIMBP3BA6NNM3 1639 aa27.09■■□□□ 1.93
SREK1-216ENST00000612404 RIMBP3Q9UFD9 1639 aa27.09■■□□□ 1.93
SREK1-216ENST00000612404 ATP10BO94823 1461 aa27.07■■□□□ 1.92
SREK1-216ENST00000612404 UHRF1BP1LA0JNW5 1464 aa27.07■■□□□ 1.92
SREK1-216ENST00000612404 CDK11AQ9UQ88 783 aaPredicted RBP27.05■■□□□ 1.92
SREK1-216ENST00000612404 MAGI3Q5TCQ9 1506 aa27.03■■□□□ 1.92
SREK1-216ENST00000612404 ADCY10Q96PN6 1610 aa27.03■■□□□ 1.92
SREK1-216ENST00000612404 EHBP1L1Q8N3D4 1523 aa27.02■■□□□ 1.92
SREK1-216ENST00000612404 TRIM26Q12899 539 aaPredicted RBP26.99■■□□□ 1.91
SREK1-216ENST00000612404 CYB5RLQ6IPT4 315 aa26.98■■□□□ 1.91
SREK1-216ENST00000612404 PLEKHD1A6NEE1 506 aa26.96■■□□□ 1.91
SREK1-216ENST00000612404 KDM5BQ9UGL1 1544 aa26.96■■□□□ 1.91
SREK1-216ENST00000612404 ZCCHC11Q5TAX3 1644 aaKnown RBP26.96■■□□□ 1.91
SREK1-216ENST00000612404 SUPT6HQ7KZ85 1726 aaKnown RBP26.94■■□□□ 1.9
SREK1-216ENST00000612404 TROQ12816 1431 aaPredicted RBP26.93■■□□□ 1.9
SREK1-216ENST00000612404 NCOA2Q15596 1464 aa26.9■■□□□ 1.9
SREK1-216ENST00000612404 PCGF6Q9BYE7 350 aa26.9■■□□□ 1.9
SREK1-216ENST00000612404 NPM1P06748 294 aaKnown RBP eCLIP26.89■■□□□ 1.9
SREK1-216ENST00000612404 PHLDB1Q86UU1 1377 aa26.88■■□□□ 1.89
SREK1-216ENST00000612404 KIF14Q15058 1648 aa26.82■■□□□ 1.88
SREK1-216ENST00000612404 KCNH8Q96L42 1107 aa26.78■■□□□ 1.88
SREK1-216ENST00000612404 MYOM3Q5VTT5 1437 aa26.77■■□□□ 1.88
SREK1-216ENST00000612404 CCNB3Q8WWL7 1395 aa26.76■■□□□ 1.87
SREK1-216ENST00000612404 ASXL2Q76L83 1435 aa26.76■■□□□ 1.87
SREK1-216ENST00000612404 RRBP1Q9P2E9 1410 aaKnown RBP26.76■■□□□ 1.87
SREK1-216ENST00000612404 WDR7Q9Y4E6 1490 aa26.75■■□□□ 1.87
SREK1-216ENST00000612404 FGD6Q6ZV73 1430 aa26.72■■□□□ 1.87
SREK1-216ENST00000612404 ABCC10Q5T3U5 1492 aa26.7■■□□□ 1.86
SREK1-216ENST00000612404 FAM50AQ14320 339 aaKnown RBP26.69■■□□□ 1.86
SREK1-216ENST00000612404 DNAJC5Q9H3Z4 198 aa26.67■■□□□ 1.86
SREK1-216ENST00000612404 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.67■■□□□ 1.86
SREK1-216ENST00000612404 GPATCH8Q9UKJ3 1502 aaKnown RBP26.66■■□□□ 1.86
SREK1-216ENST00000612404 TTC37Q6PGP7 1564 aa26.65■■□□□ 1.86
SREK1-216ENST00000612404 ITSN2Q9NZM3 1697 aa26.65■■□□□ 1.86
SREK1-216ENST00000612404 MIA2Q96PC5 1412 aa26.63■■□□□ 1.85
SREK1-216ENST00000612404 CFDP1Q9UEE9 299 aaPredicted RBP26.63■■□□□ 1.85
SREK1-216ENST00000612404 CDC42BPAQ5VT25 1732 aa26.63■■□□□ 1.85
SREK1-216ENST00000612404 MAPKBP1O60336 1514 aa26.62■■□□□ 1.85
SREK1-216ENST00000612404 PTPN23Q9H3S7 1636 aa26.62■■□□□ 1.85
SREK1-216ENST00000612404 ITGAEP38570 1179 aa26.59■■□□□ 1.85
SREK1-216ENST00000612404 ZNF777Q9ULD5 760 aaPredicted RBP26.57■■□□□ 1.84
SREK1-216ENST00000612404 MYO5CQ9NQX4 1742 aa26.56■■□□□ 1.84
SREK1-216ENST00000612404 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.56■■□□□ 1.84
SREK1-216ENST00000612404 PREX2Q70Z35 1606 aa26.56■■□□□ 1.84
SREK1-216ENST00000612404 TCOF1Q13428 1488 aaKnown RBP26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms