RNA–Protein interactions for RNA: ENST00000611835.4

GTF2IRD2B-204, Transcript of GTF2I repeat domain containing 2B, humanhuman

TSL 1 (best)

Gene GTF2IRD2B, Length 3,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD2B-204ENST00000611835 DNAJC5BQ9UF47 199 aa8.95□□□□□ -0.98
GTF2IRD2B-204ENST00000611835 HNRNPUQ00839 825 aaKnown RBP eCLIP8.94□□□□□ -0.98
GTF2IRD2B-204ENST00000611835 RAB3GAP2Q9H2M9 1393 aa8.94□□□□□ -0.98
GTF2IRD2B-204ENST00000611835 P3H3Q8IVL6 736 aa8.93□□□□□ -0.98
GTF2IRD2B-204ENST00000611835 BAZ1BQ9UIG0 1483 aaKnown RBP8.91□□□□□ -0.98
GTF2IRD2B-204ENST00000611835 SYNJ1O43426 1573 aa8.91□□□□□ -0.98
GTF2IRD2B-204ENST00000611835 CNGB1Q14028 1251 aaPredicted RBP8.89□□□□□ -0.99
GTF2IRD2B-204ENST00000611835 MSH5O43196 834 aa8.88□□□□□ -0.99
GTF2IRD2B-204ENST00000611835 PPP1R15AO75807 674 aaPredicted RBP8.87□□□□□ -0.99
GTF2IRD2B-204ENST00000611835 CCER2I3L3R5 266 aa8.87□□□□□ -0.99
GTF2IRD2B-204ENST00000611835 TIMELESSQ9UNS1 1208 aa8.86□□□□□ -0.99
GTF2IRD2B-204ENST00000611835 ARAP1Q96P48 1450 aa8.86□□□□□ -0.99
GTF2IRD2B-204ENST00000611835 TONSLQ96HA7 1378 aa8.86□□□□□ -0.99
GTF2IRD2B-204ENST00000611835 HMGXB3Q12766 1538 aa8.86□□□□□ -0.99
GTF2IRD2B-204ENST00000611835 SETD5Q9C0A6 1442 aa8.85□□□□□ -0.99
GTF2IRD2B-204ENST00000611835 RRBP1Q9P2E9 1410 aaKnown RBP8.85□□□□□ -0.99
GTF2IRD2B-204ENST00000611835 ATAD2BQ9ULI0 1458 aa8.84□□□□□ -0.99
GTF2IRD2B-204ENST00000611835 NBR1Q14596 966 aa8.84□□□□□ -0.99
GTF2IRD2B-204ENST00000611835 AMER1Q5JTC6 1135 aaPredicted RBP8.84□□□□□ -0.99
GTF2IRD2B-204ENST00000611835 FAM9BQ8IZU0 186 aa8.83□□□□□ -1
GTF2IRD2B-204ENST00000611835 B4GALNT3Q6L9W6 998 aa8.82□□□□□ -1
GTF2IRD2B-204ENST00000611835 NCAPD3P42695 1498 aa8.82□□□□□ -1
GTF2IRD2B-204ENST00000611835 KIF27Q86VH2 1401 aa8.81□□□□□ -1
GTF2IRD2B-204ENST00000611835 WDR97A6NE52 1622 aa8.81□□□□□ -1
GTF2IRD2B-204ENST00000611835 PLEKHG5O94827 1062 aa8.8□□□□□ -1
GTF2IRD2B-204ENST00000611835 POLR3GLQ9BT43 218 aa8.79□□□□□ -1
GTF2IRD2B-204ENST00000611835 DEKP35659 375 aaKnown RBP8.79□□□□□ -1
GTF2IRD2B-204ENST00000611835 FANCIQ9NVI1 1328 aa8.79□□□□□ -1
GTF2IRD2B-204ENST00000611835 PRXQ9BXM0 1461 aa8.78□□□□□ -1
GTF2IRD2B-204ENST00000611835 SENP3-EIF4A1A0A087X0R7 540 aa8.78□□□□□ -1
GTF2IRD2B-204ENST00000611835 KLHL34Q8N239 644 aa8.78□□□□□ -1
GTF2IRD2B-204ENST00000611835 PPP4R2Q9NY27 417 aa8.78□□□□□ -1
GTF2IRD2B-204ENST00000611835 PHLDB1Q86UU1 1377 aa8.77□□□□□ -1.01
GTF2IRD2B-204ENST00000611835 MAPKBP1O60336 1514 aa8.77□□□□□ -1.01
GTF2IRD2B-204ENST00000611835 MRS2Q9HD23 443 aa8.77□□□□□ -1.01
GTF2IRD2B-204ENST00000611835 ARHGAP35Q9NRY4 1499 aa8.76□□□□□ -1.01
GTF2IRD2B-204ENST00000611835 RTL5Q5HYW3 569 aaPredicted RBP8.75□□□□□ -1.01
GTF2IRD2B-204ENST00000611835 CHIC2Q9UKJ5 165 aa8.74□□□□□ -1.01
GTF2IRD2B-204ENST00000611835 CUX2O14529 1486 aa8.74□□□□□ -1.01
GTF2IRD2B-204ENST00000611835 CC2D2AQ9P2K1 1620 aa8.74□□□□□ -1.01
GTF2IRD2B-204ENST00000611835 ERICH3Q5RHP9 1530 aa8.73□□□□□ -1.01
GTF2IRD2B-204ENST00000611835 HSPA5P11021 654 aaKnown RBP8.73□□□□□ -1.01
GTF2IRD2B-204ENST00000611835 MYT1LQ9UL68 1186 aa8.73□□□□□ -1.01
GTF2IRD2B-204ENST00000611835 HOMEZQ8IX15 550 aa8.72□□□□□ -1.01
GTF2IRD2B-204ENST00000611835 RRP7BPQ9NSQ0 103 aa8.72□□□□□ -1.01
GTF2IRD2B-204ENST00000611835 NOP58Q9Y2X3 529 aaKnown RBP8.72□□□□□ -1.01
GTF2IRD2B-204ENST00000611835 EIF4G2P78344 907 aaKnown RBP eCLIP8.72□□□□□ -1.01
GTF2IRD2B-204ENST00000611835 CCDC184Q52MB2 194 aa8.72□□□□□ -1.01
GTF2IRD2B-204ENST00000611835 ANP32AP39687 249 aaKnown RBP8.72□□□□□ -1.01
GTF2IRD2B-204ENST00000611835 TOP2BQ02880 1626 aa8.71□□□□□ -1.02
GTF2IRD2B-204ENST00000611835 CARMIL1Q5VZK9 1371 aa8.71□□□□□ -1.02
GTF2IRD2B-204ENST00000611835 CCDC136Q96JN2 1154 aa8.71□□□□□ -1.02
GTF2IRD2B-204ENST00000611835 NPM2Q86SE8 214 aaKnown RBP8.7□□□□□ -1.02
GTF2IRD2B-204ENST00000611835 LRRC9Q6ZRR7 1453 aa8.7□□□□□ -1.02
GTF2IRD2B-204ENST00000611835 MTUS2Q5JR59 1369 aa8.69□□□□□ -1.02
GTF2IRD2B-204ENST00000611835 PAK3O75914 559 aaPredicted RBP8.69□□□□□ -1.02
GTF2IRD2B-204ENST00000611835 ZBTB47Q9UFB7 747 aaPredicted RBP8.69□□□□□ -1.02
GTF2IRD2B-204ENST00000611835 WASHC2AQ641Q2 1341 aa8.69□□□□□ -1.02
GTF2IRD2B-204ENST00000611835 IGF1RP08069 1367 aa8.68□□□□□ -1.02
GTF2IRD2B-204ENST00000611835 ARID3CA6NKF2 412 aa8.68□□□□□ -1.02
GTF2IRD2B-204ENST00000611835 ERICH6BQ5W0A0 696 aa8.68□□□□□ -1.02
GTF2IRD2B-204ENST00000611835 TULP1O00294 542 aaPredicted RBP8.67□□□□□ -1.02
GTF2IRD2B-204ENST00000611835 ZNF326Q5BKZ1 582 aaKnown RBP8.67□□□□□ -1.02
GTF2IRD2B-204ENST00000611835 FHAD1B1AJZ9 1412 aa8.67□□□□□ -1.02
GTF2IRD2B-204ENST00000611835 FOXD1Q16676 465 aa8.67□□□□□ -1.02
GTF2IRD2B-204ENST00000611835 PRDM2Q13029 1718 aa8.66□□□□□ -1.02
GTF2IRD2B-204ENST00000611835 FHOD3Q2V2M9 1422 aa8.66□□□□□ -1.02
GTF2IRD2B-204ENST00000611835 PRKRIP1Q9H875 184 aaPredicted RBP8.65□□□□□ -1.02
GTF2IRD2B-204ENST00000611835 CUX1P39880 1505 aa8.65□□□□□ -1.02
GTF2IRD2B-204ENST00000611835 TIAM1Q13009 1591 aa8.65□□□□□ -1.02
GTF2IRD2B-204ENST00000611835 PODXL2Q9NZ53 605 aa8.64□□□□□ -1.03
GTF2IRD2B-204ENST00000611835 SALL2Q9Y467 1007 aaPredicted RBP8.64□□□□□ -1.03
GTF2IRD2B-204ENST00000611835 L3MBTL2Q969R5 705 aa8.63□□□□□ -1.03
GTF2IRD2B-204ENST00000611835 CCDC18Q5T9S5 1454 aa8.63□□□□□ -1.03
GTF2IRD2B-204ENST00000611835 C11orf95C9JLR9 678 aaPredicted RBP8.62□□□□□ -1.03
GTF2IRD2B-204ENST00000611835 IPO9Q96P70 1041 aaKnown RBP8.62□□□□□ -1.03
GTF2IRD2B-204ENST00000611835 LAS1LQ9Y4W2 734 aaKnown RBP8.62□□□□□ -1.03
GTF2IRD2B-204ENST00000611835 ZBED9Q6R2W3 1325 aa8.61□□□□□ -1.03
GTF2IRD2B-204ENST00000611835 ANO8Q9HCE9 1232 aaPredicted RBP8.61□□□□□ -1.03
GTF2IRD2B-204ENST00000611835 TMC1Q8TDI8 760 aa8.6□□□□□ -1.03
GTF2IRD2B-204ENST00000611835 UACAQ9BZF9 1416 aa8.6□□□□□ -1.03
GTF2IRD2B-204ENST00000611835 CFTRP13569 1480 aa8.6□□□□□ -1.03
GTF2IRD2B-204ENST00000611835 UBE2Q2Q8WVN8 375 aa8.6□□□□□ -1.03
GTF2IRD2B-204ENST00000611835 FGD6Q6ZV73 1430 aa8.59□□□□□ -1.03
GTF2IRD2B-204ENST00000611835 MPHOSPH9Q99550 1183 aa8.59□□□□□ -1.03
GTF2IRD2B-204ENST00000611835 BIVM-ERCC5R4GMW8 1640 aa8.58□□□□□ -1.04
GTF2IRD2B-204ENST00000611835 NEFMP07197 916 aa8.58□□□□□ -1.04
GTF2IRD2B-204ENST00000611835 AKNAQ7Z591 1439 aa8.58□□□□□ -1.04
GTF2IRD2B-204ENST00000611835 FMN1Q68DA7 1419 aa8.57□□□□□ -1.04
GTF2IRD2B-204ENST00000611835 IL27Q8NEV9 243 aa8.57□□□□□ -1.04
GTF2IRD2B-204ENST00000611835 SLC4A1APQ9BWU0 796 aaKnown RBP8.57□□□□□ -1.04
GTF2IRD2B-204ENST00000611835 NUDCQ9Y266 331 aa8.57□□□□□ -1.04
GTF2IRD2B-204ENST00000611835 CCDC7Q96M83 1385 aa8.57□□□□□ -1.04
GTF2IRD2B-204ENST00000611835 CNTLNQ9NXG0 1405 aa8.57□□□□□ -1.04
GTF2IRD2B-204ENST00000611835 PTPRKQ15262 1439 aa8.56□□□□□ -1.04
GTF2IRD2B-204ENST00000611835 MAP3K1Q13233 1512 aa8.56□□□□□ -1.04
GTF2IRD2B-204ENST00000611835 HFM1A2PYH4 1435 aa8.55□□□□□ -1.04
GTF2IRD2B-204ENST00000611835 KIF7Q2M1P5 1343 aa8.55□□□□□ -1.04
GTF2IRD2B-204ENST00000611835 TAOK2Q9UL54 1235 aa8.55□□□□□ -1.04
GTF2IRD2B-204ENST00000611835 AQRO60306 1485 aaKnown RBP eCLIP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms