RNA–Protein interactions for RNA: ENST00000610727.1

PRKCQ-204, Transcript of protein kinase C theta, humanhuman

TSL 5 BASIC

Gene PRKCQ, Length 3,077 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCQ-204ENST00000610727 NEUROD1Q13562 356 aa11.87□□□□□ -0.51
PRKCQ-204ENST00000610727 GTF3C3Q9Y5Q9 886 aa11.85□□□□□ -0.51
PRKCQ-204ENST00000610727 SNAPC4Q5SXM2 1469 aa11.84□□□□□ -0.51
PRKCQ-204ENST00000610727 GRIN2BQ13224 1484 aa11.83□□□□□ -0.52
PRKCQ-204ENST00000610727 CENPBP07199 599 aaPredicted RBP11.8□□□□□ -0.52
PRKCQ-204ENST00000610727 APLP2Q06481 763 aa11.8□□□□□ -0.52
PRKCQ-204ENST00000610727 KIF21BO75037 1637 aa11.8□□□□□ -0.52
PRKCQ-204ENST00000610727 EIF4G3O43432 1585 aaKnown RBP11.79□□□□□ -0.52
PRKCQ-204ENST00000610727 ABCA5Q8WWZ7 1642 aa11.79□□□□□ -0.52
PRKCQ-204ENST00000610727 FHAD1B1AJZ9 1412 aa11.78□□□□□ -0.52
PRKCQ-204ENST00000610727 FHOD3Q2V2M9 1422 aa11.76□□□□□ -0.53
PRKCQ-204ENST00000610727 ERICH3Q5RHP9 1530 aa11.76□□□□□ -0.53
PRKCQ-204ENST00000610727 WDR97A6NE52 1622 aa11.75□□□□□ -0.53
PRKCQ-204ENST00000610727 JPH4Q96JJ6 628 aa11.75□□□□□ -0.53
PRKCQ-204ENST00000610727 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.74□□□□□ -0.53
PRKCQ-204ENST00000610727 HNRNPUL2Q1KMD3 747 aaKnown RBP11.74□□□□□ -0.53
PRKCQ-204ENST00000610727 ARAP1Q96P48 1450 aa11.74□□□□□ -0.53
PRKCQ-204ENST00000610727 KANK4Q5T7N3 995 aaPredicted RBP11.73□□□□□ -0.53
PRKCQ-204ENST00000610727 ARHGAP35Q9NRY4 1499 aa11.72□□□□□ -0.53
PRKCQ-204ENST00000610727 PBRM1Q86U86 1689 aa11.7□□□□□ -0.54
PRKCQ-204ENST00000610727 GRIN2AQ12879 1464 aa11.7□□□□□ -0.54
PRKCQ-204ENST00000610727 SYNJ2O15056 1496 aa11.68□□□□□ -0.54
PRKCQ-204ENST00000610727 ADAMTS12P58397 1594 aa11.67□□□□□ -0.54
PRKCQ-204ENST00000610727 BCL11AQ9H165 835 aa11.67□□□□□ -0.54
PRKCQ-204ENST00000610727 CUL7Q14999 1698 aa11.67□□□□□ -0.54
PRKCQ-204ENST00000610727 MAGI1Q96QZ7 1491 aaPredicted RBP11.66□□□□□ -0.54
PRKCQ-204ENST00000610727 VPS8Q8N3P4 1428 aa11.66□□□□□ -0.54
PRKCQ-204ENST00000610727 ITGAEP38570 1179 aa11.66□□□□□ -0.54
PRKCQ-204ENST00000610727 OSCARQ8IYS5 282 aa11.63□□□□□ -0.55
PRKCQ-204ENST00000610727 KIAA0586Q9BVV6 1533 aa11.61□□□□□ -0.55
PRKCQ-204ENST00000610727 CEP170Q5SW79 1584 aa11.6□□□□□ -0.55
PRKCQ-204ENST00000610727 PRG4Q92954 1404 aaPredicted RBP11.59□□□□□ -0.55
PRKCQ-204ENST00000610727 IQGAP2Q13576 1575 aa11.58□□□□□ -0.56
PRKCQ-204ENST00000610727 DIEXFQ68CQ4 756 aaKnown RBP11.56□□□□□ -0.56
PRKCQ-204ENST00000610727 NUP160Q12769 1436 aa11.56□□□□□ -0.56
PRKCQ-204ENST00000610727 CHD1O14646 1710 aa11.54□□□□□ -0.56
PRKCQ-204ENST00000610727 FAM50AQ14320 339 aaKnown RBP11.54□□□□□ -0.56
PRKCQ-204ENST00000610727 PLB1Q6P1J6 1458 aa11.54□□□□□ -0.56
PRKCQ-204ENST00000610727 DISP1Q96F81 1524 aa11.54□□□□□ -0.56
PRKCQ-204ENST00000610727 CTTNBP2Q8WZ74 1663 aa11.54□□□□□ -0.56
PRKCQ-204ENST00000610727 KCNH8Q96L42 1107 aa11.54□□□□□ -0.56
PRKCQ-204ENST00000610727 CYB5RLQ6IPT4 315 aa11.53□□□□□ -0.56
PRKCQ-204ENST00000610727 ERCC6L2Q5T890 1561 aa11.52□□□□□ -0.56
PRKCQ-204ENST00000610727 PTPRGP23470 1445 aa11.52□□□□□ -0.56
PRKCQ-204ENST00000610727 CARMIL2Q6F5E8 1435 aa11.52□□□□□ -0.57
PRKCQ-204ENST00000610727 FMN1Q68DA7 1419 aa11.52□□□□□ -0.57
PRKCQ-204ENST00000610727 MTUS2Q5JR59 1369 aa11.52□□□□□ -0.57
PRKCQ-204ENST00000610727 ANP32EQ9BTT0 268 aa11.49□□□□□ -0.57
PRKCQ-204ENST00000610727 PCF11O94913 1555 aaKnown RBP11.48□□□□□ -0.57
PRKCQ-204ENST00000610727 ZNF777Q9ULD5 760 aaPredicted RBP11.48□□□□□ -0.57
PRKCQ-204ENST00000610727 CDK13Q14004 1512 aaKnown RBP11.48□□□□□ -0.57
PRKCQ-204ENST00000610727 UGGT2Q9NYU1 1516 aa11.46□□□□□ -0.57
PRKCQ-204ENST00000610727 CASKIN1Q8WXD9 1431 aa11.46□□□□□ -0.57
PRKCQ-204ENST00000610727 EFCAB5A4FU69 1503 aa11.46□□□□□ -0.58
PRKCQ-204ENST00000610727 PRKCSHP14314 528 aaPredicted RBP11.45□□□□□ -0.58
PRKCQ-204ENST00000610727 PLEKHD1A6NEE1 506 aa11.44□□□□□ -0.58
PRKCQ-204ENST00000610727 SAMD9Q5K651 1589 aa11.44□□□□□ -0.58
PRKCQ-204ENST00000610727 KIAA0556O60303 1618 aa11.44□□□□□ -0.58
PRKCQ-204ENST00000610727 PHLDB1Q86UU1 1377 aa11.44□□□□□ -0.58
PRKCQ-204ENST00000610727 CHIC2Q9UKJ5 165 aa11.44□□□□□ -0.58
PRKCQ-204ENST00000610727 ZNF644Q9H582 1327 aaPredicted RBP11.42□□□□□ -0.58
PRKCQ-204ENST00000610727 CDK11AQ9UQ88 783 aaPredicted RBP11.42□□□□□ -0.58
PRKCQ-204ENST00000610727 LRRC9Q6ZRR7 1453 aa11.42□□□□□ -0.58
PRKCQ-204ENST00000610727 NUP153P49790 1475 aaKnown RBP11.4□□□□□ -0.58
PRKCQ-204ENST00000610727 EPRSP07814 1512 aaKnown RBP11.4□□□□□ -0.58
PRKCQ-204ENST00000610727 FYCO1Q9BQS8 1478 aa11.4□□□□□ -0.58
PRKCQ-204ENST00000610727 CCER1Q8TC90 406 aaPredicted RBP11.39□□□□□ -0.59
PRKCQ-204ENST00000610727 TIAM1Q13009 1591 aa11.39□□□□□ -0.59
PRKCQ-204ENST00000610727 NPM1P06748 294 aaKnown RBP eCLIP11.37□□□□□ -0.59
PRKCQ-204ENST00000610727 MAGI3Q5TCQ9 1506 aa11.36□□□□□ -0.59
PRKCQ-204ENST00000610727 UACAQ9BZF9 1416 aa11.36□□□□□ -0.59
PRKCQ-204ENST00000610727 ATP10BO94823 1461 aa11.36□□□□□ -0.59
PRKCQ-204ENST00000610727 CCNB3Q8WWL7 1395 aa11.35□□□□□ -0.59
PRKCQ-204ENST00000610727 YTHDC1Q96MU7 727 aaKnown RBP11.35□□□□□ -0.59
PRKCQ-204ENST00000610727 CFDP1Q9UEE9 299 aaPredicted RBP11.35□□□□□ -0.59
PRKCQ-204ENST00000610727 CLASP1Q7Z460 1538 aa11.35□□□□□ -0.59
PRKCQ-204ENST00000610727 RRP7BPQ9NSQ0 103 aa11.34□□□□□ -0.59
PRKCQ-204ENST00000610727 NCOA2Q15596 1464 aa11.33□□□□□ -0.6
PRKCQ-204ENST00000610727 LRRIQ1Q96JM4 1722 aa11.32□□□□□ -0.6
PRKCQ-204ENST00000610727 RAPGEF6Q8TEU7 1601 aa11.32□□□□□ -0.6
PRKCQ-204ENST00000610727 HNRNPMP52272 730 aaKnown RBP eCLIP11.31□□□□□ -0.6
PRKCQ-204ENST00000610727 ERICH6Q7L0X2 663 aa11.3□□□□□ -0.6
PRKCQ-204ENST00000610727 HECW1Q76N89 1606 aa11.3□□□□□ -0.6
PRKCQ-204ENST00000610727 CLSPNQ9HAW4 1339 aa11.29□□□□□ -0.6
PRKCQ-204ENST00000610727 ZNF316A6NFI3 1004 aaPredicted RBP11.28□□□□□ -0.6
PRKCQ-204ENST00000610727 MYT1LQ9UL68 1186 aa11.28□□□□□ -0.6
PRKCQ-204ENST00000610727 CCDC18Q5T9S5 1454 aa11.28□□□□□ -0.6
PRKCQ-204ENST00000610727 ARHGEF11O15085 1522 aa11.27□□□□□ -0.6
PRKCQ-204ENST00000610727 SHROOM2Q13796 1616 aa11.27□□□□□ -0.61
PRKCQ-204ENST00000610727 TROQ12816 1431 aaPredicted RBP11.27□□□□□ -0.61
PRKCQ-204ENST00000610727 ABCA8O94911 1581 aa11.26□□□□□ -0.61
PRKCQ-204ENST00000610727 FGD6Q6ZV73 1430 aa11.26□□□□□ -0.61
PRKCQ-204ENST00000610727 TSHZ2Q9NRE2 1034 aa11.26□□□□□ -0.61
PRKCQ-204ENST00000610727 MYOM3Q5VTT5 1437 aa11.25□□□□□ -0.61
PRKCQ-204ENST00000610727 MAP3K1Q13233 1512 aa11.24□□□□□ -0.61
PRKCQ-204ENST00000610727 RRBP1Q9P2E9 1410 aaKnown RBP11.24□□□□□ -0.61
PRKCQ-204ENST00000610727 PTPRKQ15262 1439 aa11.23□□□□□ -0.61
PRKCQ-204ENST00000610727 KIF14Q15058 1648 aa11.23□□□□□ -0.61
PRKCQ-204ENST00000610727 ABCC2Q92887 1545 aa11.22□□□□□ -0.61
PRKCQ-204ENST00000610727 CFAP43Q8NDM7 1665 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms